Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3925

Experiment: KB with Dimethyl Sulfoxide 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Dimethyl Sulfoxide 1.25 vol%
4,666,735	+				-1.7
4,666,763	-				-0.2
4,666,797	+				-0.3
4,666,797	+				+2.6
4,666,798	-				-0.4
4,666,798	-				+0.9
4,666,798	-				-0.8
4,666,801	+				-0.4
4,666,824	+				-2.0
4,666,844	+				-0.5
4,666,844	+				-0.5
4,666,969	+		Psyr_3924	0.20	+0.0
4,666,969	+		Psyr_3924	0.20	+0.5
4,666,969	+		Psyr_3924	0.20	-0.2
4,666,970	-		Psyr_3924	0.20	-0.2
4,667,040	+		Psyr_3924	0.30	-2.7
4,667,040	+		Psyr_3924	0.30	-1.8
4,667,041	-		Psyr_3924	0.30	+0.6
4,667,073	+		Psyr_3924	0.34	-0.6
4,667,073	+		Psyr_3924	0.34	-0.5
4,667,074	-		Psyr_3924	0.34	+1.0
4,667,078	-		Psyr_3924	0.35	-0.1
4,667,078	-		Psyr_3924	0.35	-1.7
4,667,125	+		Psyr_3924	0.42	-0.2
4,667,162	-		Psyr_3924	0.47	+3.0
4,667,166	+		Psyr_3924	0.47	+1.1
4,667,167	-		Psyr_3924	0.47	-1.3
4,667,184	+		Psyr_3924	0.50	-0.5
4,667,269	+		Psyr_3924	0.62	-0.1
4,667,269	+		Psyr_3924	0.62	-1.0
4,667,269	+		Psyr_3924	0.62	+0.7
4,667,270	-		Psyr_3924	0.62	-0.2
4,667,270	-		Psyr_3924	0.62	+0.4
4,667,356	+		Psyr_3924	0.74	-1.0
4,667,356	+		Psyr_3924	0.74	-1.0
4,667,357	-		Psyr_3924	0.74	-0.5
4,667,402	-		Psyr_3924	0.80	-0.1
4,667,402	-		Psyr_3924	0.80	+1.6
4,667,402	-		Psyr_3924	0.80	-1.6
4,667,445	+		Psyr_3924	0.86	-0.5
4,667,446	-		Psyr_3924	0.87	-0.1
4,667,473	+				+0.8
4,667,585	+				+3.0
4,667,585	+				-0.2
4,667,585	+				-1.3
4,667,585	+				+1.0
4,667,585	+				-0.9
4,667,669	+				-1.0
4,667,670	-				-1.0
4,667,714	-				-0.5
4,667,782	+				+0.9
4,667,782	+				+1.2
4,667,975	+				-2.1
4,668,012	-		Psyr_3925	0.10	+0.3
4,668,056	+		Psyr_3925	0.11	-0.3
4,668,057	-		Psyr_3925	0.12	+1.3
4,668,101	+		Psyr_3925	0.13	+0.5
4,668,102	-		Psyr_3925	0.13	-1.5
4,668,128	+		Psyr_3925	0.14	+1.4
4,668,128	+		Psyr_3925	0.14	-0.1
4,668,423	-		Psyr_3925	0.23	+2.2
4,668,881	+		Psyr_3925	0.38	-1.9
4,668,882	-		Psyr_3925	0.38	+1.4
4,669,056	-		Psyr_3925	0.43	-0.1
4,669,148	+		Psyr_3925	0.46	+1.6
4,669,289	+		Psyr_3925	0.51	-0.4
4,669,289	+		Psyr_3925	0.51	-1.1
4,669,289	+		Psyr_3925	0.51	-0.1
4,669,290	-		Psyr_3925	0.51	+1.0
4,669,290	-		Psyr_3925	0.51	+1.3
4,669,290	-		Psyr_3925	0.51	+1.4
4,669,290	-		Psyr_3925	0.51	-0.2
4,669,401	-		Psyr_3925	0.54	+0.5
4,669,401	-		Psyr_3925	0.54	+0.2
4,669,463	+		Psyr_3925	0.56	-1.0
4,669,463	+		Psyr_3925	0.56	+0.6
4,669,463	+		Psyr_3925	0.56	-0.3
4,669,463	+				-0.5
4,669,463	+		Psyr_3925	0.56	-1.1
4,669,463	+		Psyr_3925	0.56	+1.5
4,669,463	+		Psyr_3925	0.56	-0.9
4,669,464	-		Psyr_3925	0.56	-0.1
4,669,464	-		Psyr_3925	0.56	-0.5
4,669,519	+		Psyr_3925	0.58	+0.6
4,669,519	+		Psyr_3925	0.58	-0.6
4,669,623	-		Psyr_3925	0.61	+1.0
4,669,631	+		Psyr_3925	0.62	+0.0
4,669,631	+		Psyr_3925	0.62	-0.3
4,669,632	-		Psyr_3925	0.62	+0.5
4,669,632	-		Psyr_3925	0.62	+0.9
4,669,632	-		Psyr_3925	0.62	-1.0
4,669,694	+		Psyr_3925	0.64	+2.0
4,669,694	+		Psyr_3925	0.64	-0.2
4,669,728	+		Psyr_3925	0.65	-1.1
4,669,754	+		Psyr_3925	0.66	-0.5
4,669,754	+		Psyr_3925	0.66	-0.9
4,669,755	-		Psyr_3925	0.66	+1.0
4,669,755	-		Psyr_3925	0.66	+0.9
4,669,842	-		Psyr_3925	0.68	-0.3
4,669,949	+		Psyr_3925	0.72	+0.4
4,669,973	+		Psyr_3925	0.73	+0.6
4,669,973	+		Psyr_3925	0.73	-1.3
4,669,973	+		Psyr_3925	0.73	-0.5
4,669,973	+		Psyr_3925	0.73	+0.8
4,669,973	+		Psyr_3925	0.73	-1.8
4,669,973	+		Psyr_3925	0.73	-0.1
4,669,973	+		Psyr_3925	0.73	-1.1
4,669,973	+		Psyr_3925	0.73	+0.7
4,669,973	+		Psyr_3925	0.73	+0.4
4,669,973	+		Psyr_3925	0.73	-0.0
4,669,973	+		Psyr_3925	0.73	+0.5
4,669,973	+		Psyr_3925	0.73	+0.5
4,669,974	-		Psyr_3925	0.73	+2.3
4,669,974	-		Psyr_3925	0.73	+0.2
4,669,974	-		Psyr_3925	0.73	-0.7
4,669,974	-		Psyr_3925	0.73	+0.3
4,669,974	-		Psyr_3925	0.73	+1.5
4,669,974	-		Psyr_3925	0.73	-2.3
4,669,974	-		Psyr_3925	0.73	-0.8
4,669,994	+		Psyr_3925	0.73	+0.1
4,669,994	+		Psyr_3925	0.73	-0.7
4,669,994	+		Psyr_3925	0.73	+0.0
4,669,995	-		Psyr_3925	0.73	+0.5
4,669,995	-		Psyr_3925	0.73	-0.5
4,669,995	-		Psyr_3925	0.73	-1.0
4,670,108	+		Psyr_3925	0.77	+1.9
4,670,109	-		Psyr_3925	0.77	+1.0
4,670,378	+		Psyr_3925	0.85	-0.4
4,670,378	+		Psyr_3925	0.85	-0.7
4,670,379	-		Psyr_3925	0.86	-0.2
4,670,642	+				-0.3
4,670,642	+				+0.5
4,670,643	-				+0.5
4,670,643	-				+2.3
4,670,769	-				-1.3
4,670,893	-				+1.0
4,670,903	+				-1.0
4,670,932	+				-1.0
4,670,932	+				-0.7
4,670,933	-				+0.5
4,671,070	-		Psyr_3926	0.25	-0.2
4,671,166	+		Psyr_3926	0.41	-0.3
4,671,171	-		Psyr_3926	0.42	+0.5
4,671,171	-		Psyr_3926	0.42	+0.3
4,671,239	+		Psyr_3926	0.54	-0.3
4,671,240	-		Psyr_3926	0.54	-0.2
4,671,610	-		Psyr_3927	0.13	-0.2