Experiment: KB with Dimethyl Sulfoxide 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3457 and Psyr_3458 are separated by 15 nucleotides Psyr_3458 and Psyr_3459 are separated by 236 nucleotides
Psyr_3457: Psyr_3457 - Flagellar FliF M-ring protein, at 4,120,078 to 4,121,862
_3457
Psyr_3458: Psyr_3458 - Flagellar hook-basal body complex protein FliE, at 4,121,878 to 4,122,213
_3458
Psyr_3459: Psyr_3459 - Helix-turn-helix, Fis-type, at 4,122,450 to 4,123,865
_3459
Position (kb) 4121
4122
4123 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 4121.031 kb on - strand, within Psyr_3457 at 4121.277 kb on - strand, within Psyr_3457 at 4121.391 kb on + strand, within Psyr_3457 at 4121.506 kb on + strand, within Psyr_3457 at 4121.532 kb on + strand, within Psyr_3457 at 4121.594 kb on + strand, within Psyr_3457 at 4121.594 kb on + strand, within Psyr_3457 at 4121.594 kb on + strand, within Psyr_3457 at 4121.595 kb on - strand, within Psyr_3457 at 4121.595 kb on - strand, within Psyr_3457 at 4121.595 kb on - strand, within Psyr_3457 at 4121.793 kb on + strand at 4121.842 kb on - strand at 4121.870 kb on + strand at 4121.870 kb on + strand at 4121.870 kb on + strand at 4121.870 kb on + strand at 4121.870 kb on + strand at 4121.870 kb on + strand at 4121.871 kb on - strand at 4121.871 kb on - strand at 4121.926 kb on - strand, within Psyr_3458 at 4121.926 kb on - strand, within Psyr_3458 at 4122.187 kb on - strand at 4122.213 kb on + strand at 4122.213 kb on + strand at 4122.213 kb on + strand at 4122.213 kb on + strand at 4122.213 kb on + strand at 4122.213 kb on + strand at 4122.213 kb on + strand at 4122.213 kb on + strand at 4122.213 kb on + strand at 4122.213 kb on + strand at 4122.213 kb on + strand at 4122.213 kb on + strand at 4122.213 kb on + strand at 4122.213 kb on + strand at 4122.214 kb on - strand at 4122.214 kb on - strand at 4122.214 kb on - strand at 4122.214 kb on - strand at 4122.214 kb on - strand at 4122.214 kb on - strand at 4122.214 kb on - strand at 4122.214 kb on - strand at 4122.214 kb on - strand at 4122.214 kb on - strand at 4122.266 kb on + strand at 4122.267 kb on - strand at 4122.268 kb on + strand at 4122.268 kb on + strand at 4122.269 kb on - strand at 4122.392 kb on + strand at 4122.392 kb on + strand at 4122.392 kb on + strand at 4122.392 kb on + strand at 4122.393 kb on - strand at 4122.406 kb on + strand at 4122.407 kb on - strand at 4122.521 kb on + strand at 4122.521 kb on + strand at 4122.522 kb on - strand at 4122.902 kb on + strand, within Psyr_3459 at 4122.903 kb on - strand, within Psyr_3459 at 4122.903 kb on - strand, within Psyr_3459 at 4122.903 kb on - strand, within Psyr_3459
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Dimethyl Sulfoxide 1.25 vol% remove 4,121,031 - Psyr_3457 0.53 +0.4 4,121,277 - Psyr_3457 0.67 +0.4 4,121,391 + Psyr_3457 0.74 -3.0 4,121,506 + Psyr_3457 0.80 -3.0 4,121,532 + Psyr_3457 0.81 -1.6 4,121,594 + Psyr_3457 0.85 +0.3 4,121,594 + Psyr_3457 0.85 -0.7 4,121,594 + Psyr_3457 0.85 +0.3 4,121,595 - Psyr_3457 0.85 -0.7 4,121,595 - Psyr_3457 0.85 +0.3 4,121,595 - Psyr_3457 0.85 +0.4 4,121,793 + +0.0 4,121,842 - -1.0 4,121,870 + +0.7 4,121,870 + -0.3 4,121,870 + +0.2 4,121,870 + -0.2 4,121,870 + -0.7 4,121,870 + +0.1 4,121,871 - +0.3 4,121,871 - -0.5 4,121,926 - Psyr_3458 0.14 +1.0 4,121,926 - Psyr_3458 0.14 +1.3 4,122,187 - -1.3 4,122,213 + +1.0 4,122,213 + +3.0 4,122,213 + -0.6 4,122,213 + -0.8 4,122,213 + +0.3 4,122,213 + +0.5 4,122,213 + +1.0 4,122,213 + -1.1 4,122,213 + -2.3 4,122,213 + -0.4 4,122,213 + +0.5 4,122,213 + -0.6 4,122,213 + +0.5 4,122,213 + +1.4 4,122,214 - +0.4 4,122,214 - +1.1 4,122,214 - +0.6 4,122,214 - +0.1 4,122,214 - -0.0 4,122,214 - -0.2 4,122,214 - +0.7 4,122,214 - +2.6 4,122,214 - +0.4 4,122,214 - -2.2 4,122,266 + +0.4 4,122,267 - +0.5 4,122,268 + -2.5 4,122,268 + -1.1 4,122,269 - +1.2 4,122,392 + +0.3 4,122,392 + -0.7 4,122,392 + -0.4 4,122,392 + -0.5 4,122,393 - +1.4 4,122,406 + -1.8 4,122,407 - -1.1 4,122,521 + -0.1 4,122,521 + -0.8 4,122,522 - -0.6 4,122,902 + Psyr_3459 0.32 -0.7 4,122,903 - Psyr_3459 0.32 -0.6 4,122,903 - Psyr_3459 0.32 +3.3 4,122,903 - Psyr_3459 0.32 -0.6
Or see this region's nucleotide sequence