Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2896

Experiment: KB with Dimethyl Sulfoxide 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Dimethyl Sulfoxide 1.25 vol%
3,473,545	+		Psyr_2894	0.75	+0.5
3,473,546	-		Psyr_2894	0.75	-0.7
3,473,656	+				-0.5
3,473,656	+				-0.3
3,473,657	-				-1.1
3,473,657	-				+0.4
3,474,508	-				-1.0
3,474,508	-				-0.0
3,474,733	+		Psyr_2896	0.14	+1.2
3,474,793	-		Psyr_2896	0.17	+0.2
3,474,863	+		Psyr_2896	0.21	-2.1
3,474,964	-		Psyr_2896	0.26	-2.4
3,474,964	-		Psyr_2896	0.26	+0.6
3,474,996	+		Psyr_2896	0.28	-0.9
3,475,119	+		Psyr_2896	0.35	-0.9
3,475,405	-		Psyr_2896	0.50	-0.3
3,475,448	+		Psyr_2896	0.53	-0.9
3,475,448	+		Psyr_2896	0.53	+0.2
3,475,449	-		Psyr_2896	0.53	+0.4
3,475,449	-		Psyr_2896	0.53	+1.2
3,475,449	-		Psyr_2896	0.53	-1.1
3,475,736	+		Psyr_2896	0.69	-0.6
3,475,736	+		Psyr_2896	0.69	-0.2
3,475,736	+		Psyr_2896	0.69	-0.6
3,475,736	+		Psyr_2896	0.69	+1.2
3,475,736	+		Psyr_2896	0.69	+0.9
3,475,736	+		Psyr_2896	0.69	+0.9
3,475,736	+		Psyr_2896	0.69	-0.4
3,475,736	+		Psyr_2896	0.69	-0.2
3,475,736	+		Psyr_2896	0.69	-1.1
3,475,737	-		Psyr_2896	0.69	+0.1
3,475,737	-		Psyr_2896	0.69	-1.2
3,475,737	-		Psyr_2896	0.69	-1.3
3,475,737	-		Psyr_2896	0.69	-0.4
3,475,737	-		Psyr_2896	0.69	-1.4
3,475,737	-		Psyr_2896	0.69	+0.6
3,475,749	+		Psyr_2896	0.69	+0.5
3,475,749	+		Psyr_2896	0.69	-1.4
3,475,749	+		Psyr_2896	0.69	+0.5
3,475,749	+		Psyr_2896	0.69	+0.2
3,475,749	+		Psyr_2896	0.69	-1.1
3,475,750	-		Psyr_2896	0.69	-1.5
3,475,750	-		Psyr_2896	0.69	-0.9
3,475,750	-		Psyr_2896	0.69	-0.6
3,475,750	-		Psyr_2896	0.69	+0.7
3,475,750	-		Psyr_2896	0.69	-0.1
3,475,804	-		Psyr_2896	0.72	-0.5
3,475,836	+		Psyr_2896	0.74	-0.7
3,475,836	+		Psyr_2896	0.74	+0.6
3,475,836	+		Psyr_2896	0.74	+0.3
3,475,836	+		Psyr_2896	0.74	+0.3
3,475,836	+		Psyr_2896	0.74	+1.1
3,475,837	-		Psyr_2896	0.74	-0.9
3,475,837	-		Psyr_2896	0.74	-0.2
3,475,837	-		Psyr_2896	0.74	-0.5
3,475,837	-		Psyr_2896	0.74	-0.3
3,475,837	-		Psyr_2896	0.74	+0.8
3,475,927	-		Psyr_2896	0.79	-1.4
3,475,927	-		Psyr_2896	0.79	+0.2
3,475,998	+		Psyr_2896	0.83	-1.2
3,475,998	+		Psyr_2896	0.83	-1.6
3,475,998	+		Psyr_2896	0.83	-1.2
3,475,998	+		Psyr_2896	0.83	-0.2
3,475,999	-		Psyr_2896	0.83	-0.7
3,475,999	-		Psyr_2896	0.83	+0.0
3,476,035	-		Psyr_2896	0.85	-1.2
3,476,172	+				-0.4
3,476,172	+				+1.0
3,476,214	+				+0.2
3,476,242	+				+0.4
3,476,242	+				+0.5
3,476,242	+				-1.1
3,476,242	+				+0.5
3,476,242	+				+0.6
3,476,242	+				+0.6
3,476,242	+				+0.5
3,476,243	-				+0.5
3,476,243	-				-0.7
3,476,243	-				-2.2
3,476,341	+				-2.0
3,476,342	-				-1.0
3,476,342	-				-1.0
3,476,394	+		Psyr_2897	0.12	-0.2
3,476,405	+		Psyr_2897	0.14	-2.2
3,476,405	+		Psyr_2897	0.14	-1.4
3,476,406	-		Psyr_2897	0.14	-0.5
3,476,409	+		Psyr_2897	0.15	-0.8
3,476,409	+		Psyr_2897	0.15	-0.7
3,476,409	+		Psyr_2897	0.15	-2.1
3,476,409	+		Psyr_2897	0.15	+2.2
3,476,409	+		Psyr_2897	0.15	-3.3
3,476,409	+		Psyr_2897	0.15	-0.6
3,476,410	-		Psyr_2897	0.15	-0.4
3,476,410	-		Psyr_2897	0.15	-1.0
3,476,410	-		Psyr_2897	0.15	-0.6
3,476,410	-		Psyr_2897	0.15	-3.0
3,476,410	-		Psyr_2897	0.15	-1.0
3,476,410	-		Psyr_2897	0.15	-1.6
3,476,410	-		Psyr_2897	0.15	-0.8
3,476,410	-		Psyr_2897	0.15	-2.5
3,476,585	+		Psyr_2897	0.41	-2.2
3,476,585	+		Psyr_2897	0.41	-1.7
3,476,586	-		Psyr_2897	0.41	-1.2
3,476,654	+		Psyr_2897	0.51	+0.3
3,476,654	+		Psyr_2897	0.51	-1.8
3,476,655	-		Psyr_2897	0.51	+1.3
3,476,941	+				-1.1
3,476,941	+				+2.2
3,476,941	+				-0.4
3,476,942	-				-2.6
3,476,942	-				-1.8
3,476,942	-				+0.2
3,476,942	-				-0.5
3,476,942	-				-1.0
3,476,942	-				-0.6
3,476,942	-				+0.2
3,476,942	-				-1.7
3,476,949	+				-1.5
3,476,949	+				-1.4
3,476,949	+				-1.8
3,476,950	-				-1.8
3,476,979	+				-1.7
3,477,021	+				-0.3
3,477,021	+				-1.0
3,477,022	-				+1.4
3,477,049	+				+0.1
3,477,050	-				-0.1
3,477,050	-				-0.2
3,477,124	-				-1.6
3,477,124	-				-0.3
3,477,124	-				+0.6
3,477,130	+				-1.3
3,477,234	+		Psyr_2898	0.30	-2.2
3,477,260	-		Psyr_2898	0.37	-0.3