Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2355

Experiment: KB with Dimethyl Sulfoxide 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Dimethyl Sulfoxide 1.25 vol%
2,730,308	+		Psyr_2354	0.49	-0.7
2,730,308	+		Psyr_2354	0.49	-0.4
2,730,318	-		Psyr_2354	0.50	+0.4
2,730,318	-		Psyr_2354	0.50	-0.6
2,730,350	+		Psyr_2354	0.54	+0.1
2,730,350	+		Psyr_2354	0.54	+0.5
2,730,351	-		Psyr_2354	0.54	+0.0
2,730,391	-		Psyr_2354	0.58	+0.3
2,730,395	+		Psyr_2354	0.59	+0.2
2,730,396	-		Psyr_2354	0.59	+0.5
2,730,398	+		Psyr_2354	0.59	-1.6
2,730,398	+		Psyr_2354	0.59	-1.3
2,730,399	-		Psyr_2354	0.59	-0.7
2,730,602	+		Psyr_2354	0.84	-1.1
2,730,603	-		Psyr_2354	0.84	-0.3
2,730,674	+				+0.7
2,730,674	+				-2.0
2,730,675	-				-1.0
2,730,707	-				-0.0
2,730,707	-				+0.3
2,730,777	+				-1.5
2,730,778	-				+1.3
2,730,778	-				-0.5
2,730,861	+				-1.5
2,730,869	+				-1.5
2,730,870	-				+1.0
2,731,236	+		Psyr_2355	0.25	-0.3
2,731,236	+		Psyr_2355	0.25	+2.0
2,731,236	+		Psyr_2355	0.25	-0.3
2,731,236	+		Psyr_2355	0.25	+0.3
2,731,236	+		Psyr_2355	0.25	-0.4
2,731,237	-		Psyr_2355	0.25	-0.7
2,731,237	-		Psyr_2355	0.25	-1.3
2,731,258	-		Psyr_2355	0.29	+1.5
2,731,258	-		Psyr_2355	0.29	-0.5
2,731,258	-		Psyr_2355	0.29	+0.4
2,731,275	+		Psyr_2355	0.33	-0.5
2,731,276	-		Psyr_2355	0.33	-2.6
2,731,276	-		Psyr_2355	0.33	-1.0
2,731,276	-		Psyr_2355	0.33	+1.5
2,731,290	+		Psyr_2355	0.36	-1.1
2,731,440	+		Psyr_2355	0.65	-1.5
2,731,441	-		Psyr_2355	0.65	-0.2
2,731,472	-		Psyr_2355	0.72	-1.2
2,731,617	+				-0.7
2,731,617	+				+0.7
2,731,617	+				+0.3
2,731,617	+				-0.7
2,731,618	-				+1.1
2,731,618	-				+0.3
2,731,618	-				-1.0
2,731,618	-				-0.8
2,731,618	-				-0.0
2,731,618	-				+0.5
2,731,658	-				+0.6
2,731,658	-				+3.3
2,731,709	-				-0.7
2,731,709	-				+2.3
2,731,724	-				-0.1
2,731,775	+				-1.2
2,731,775	+				-1.2
2,731,775	+				+1.3
2,731,775	+				-2.1
2,731,775	+				+0.2
2,731,775	+				+0.1
2,731,776	-				-1.5
2,731,776	-				-0.4
2,731,776	-				+0.7
2,731,805	+				-0.4
2,731,805	+				-0.7
2,731,805	+				-0.3
2,731,805	+				-1.0
2,731,806	-				-0.4
2,731,806	-				-0.4
2,731,806	-				+0.6
2,731,806	-				-0.9
2,731,806	-				-0.1
2,732,047	+				-2.8
2,732,047	+				+0.2
2,732,047	+				+0.7
2,732,047	+				+0.6
2,732,048	-				+0.1
2,732,048	-				-1.0
2,732,048	-				+1.6
2,732,048	-				+1.6
2,732,048	-				+0.2
2,732,048	-				+1.1
2,732,110	+		Psyr_2356	0.12	-0.4
2,732,111	-		Psyr_2356	0.12	-0.0
2,732,145	-		Psyr_2356	0.14	+2.5
2,732,145	-		Psyr_2356	0.14	-0.0
2,732,187	+		Psyr_2356	0.16	-0.0
2,732,188	-		Psyr_2356	0.16	-1.3
2,732,389	+		Psyr_2356	0.27	-0.0
2,732,395	+		Psyr_2356	0.28	-1.6