Experiment: KB with Dimethyl Sulfoxide 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2244 and Psyr_2245 are separated by 170 nucleotides Psyr_2245 and Psyr_2246 are separated by 291 nucleotides
Psyr_2244: Psyr_2244 - DNA topoisomerase III, at 2,608,140 to 2,610,110
_2244
Psyr_2245: Psyr_2245 - conserved domain protein, at 2,610,281 to 2,611,150
_2245
Psyr_2246: Psyr_2246 - Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer, at 2,611,442 to 2,613,331
_2246
Position (kb)
2610
2611
2612 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2609.944 kb on + strand at 2609.957 kb on - strand at 2610.114 kb on + strand at 2610.161 kb on + strand at 2610.162 kb on - strand at 2610.166 kb on - strand at 2610.193 kb on + strand at 2610.681 kb on - strand, within Psyr_2245 at 2610.681 kb on - strand, within Psyr_2245 at 2610.954 kb on - strand, within Psyr_2245 at 2611.100 kb on - strand at 2611.224 kb on - strand at 2611.258 kb on + strand at 2611.258 kb on + strand at 2611.272 kb on + strand at 2611.366 kb on - strand at 2611.366 kb on - strand at 2611.718 kb on + strand, within Psyr_2246 at 2611.742 kb on + strand, within Psyr_2246 at 2611.743 kb on - strand, within Psyr_2246 at 2611.743 kb on - strand, within Psyr_2246 at 2611.803 kb on - strand, within Psyr_2246 at 2611.826 kb on + strand, within Psyr_2246 at 2611.826 kb on + strand, within Psyr_2246 at 2611.871 kb on + strand, within Psyr_2246 at 2611.871 kb on + strand, within Psyr_2246 at 2611.871 kb on + strand, within Psyr_2246 at 2611.872 kb on - strand, within Psyr_2246 at 2611.872 kb on - strand, within Psyr_2246 at 2611.872 kb on - strand, within Psyr_2246 at 2612.018 kb on + strand, within Psyr_2246 at 2612.111 kb on - strand, within Psyr_2246 at 2612.122 kb on + strand, within Psyr_2246 at 2612.122 kb on + strand, within Psyr_2246
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Dimethyl Sulfoxide 1.25 vol% remove 2,609,944 + -1.1 2,609,957 - -3.4 2,610,114 + -0.4 2,610,161 + +0.8 2,610,162 - -0.7 2,610,166 - +1.5 2,610,193 + +0.2 2,610,681 - Psyr_2245 0.46 -0.9 2,610,681 - Psyr_2245 0.46 -2.3 2,610,954 - Psyr_2245 0.77 -0.5 2,611,100 - +2.8 2,611,224 - -1.0 2,611,258 + -0.6 2,611,258 + -0.7 2,611,272 + +1.9 2,611,366 - -0.5 2,611,366 - -2.4 2,611,718 + Psyr_2246 0.15 +1.2 2,611,742 + Psyr_2246 0.16 +3.5 2,611,743 - Psyr_2246 0.16 -0.4 2,611,743 - Psyr_2246 0.16 +0.8 2,611,803 - Psyr_2246 0.19 -0.2 2,611,826 + Psyr_2246 0.20 +0.4 2,611,826 + Psyr_2246 0.20 -0.1 2,611,871 + Psyr_2246 0.23 -1.4 2,611,871 + Psyr_2246 0.23 -0.5 2,611,871 + Psyr_2246 0.23 -0.6 2,611,872 - Psyr_2246 0.23 +0.5 2,611,872 - Psyr_2246 0.23 +0.8 2,611,872 - Psyr_2246 0.23 +0.8 2,612,018 + Psyr_2246 0.30 +1.6 2,612,111 - Psyr_2246 0.35 -0.6 2,612,122 + Psyr_2246 0.36 +0.8 2,612,122 + Psyr_2246 0.36 +0.2
Or see this region's nucleotide sequence