Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1684

Experiment: KB with Dimethyl Sulfoxide 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Dimethyl Sulfoxide 1.25 vol%
1,891,889	+		Psyr_1683	0.58	+0.0
1,892,000	-		Psyr_1683	0.69	-0.6
1,892,293	+				+1.2
1,892,356	+				-0.9
1,892,356	+				-0.1
1,892,356	+				+0.4
1,892,356	+				-0.5
1,892,357	-				+0.1
1,892,357	-				-0.3
1,892,357	-				-0.1
1,892,398	+				+1.0
1,892,399	-				+0.7
1,892,429	-				-1.2
1,892,448	-				-0.1
1,892,490	+				-1.2
1,892,491	-				+0.8
1,892,491	-				+0.4
1,892,492	+				+0.4
1,892,492	+				-1.2
1,892,493	-				+1.0
1,892,493	-				-0.2
1,892,493	-				+1.8
1,892,493	-				-0.3
1,892,493	-				+1.3
1,892,493	-				+0.8
1,892,493	-				-1.1
1,892,611	+				-0.7
1,892,611	+				+0.4
1,892,611	+				-0.2
1,892,611	+				+0.1
1,892,611	+				+2.1
1,892,611	+				-0.1
1,892,611	+				-0.2
1,892,612	-				+0.1
1,892,612	-				+1.1
1,892,612	-				+1.6
1,892,612	-				-0.5
1,892,612	-				-0.9
1,892,612	-				+1.8
1,892,612	-				-0.5
1,892,612	-				-0.6
1,892,612	-				+0.9
1,892,612	-				+0.9
1,892,613	+				+1.1
1,892,613	+				-2.6
1,892,613	+				+0.1
1,892,614	-				-0.3
1,892,614	-				-0.7
1,892,615	+				-0.8
1,892,615	+				+0.4
1,892,615	+				-0.4
1,892,615	+				-1.5
1,892,615	+				-0.3
1,892,615	+				-1.0
1,892,615	+				-0.5
1,892,615	+				+2.7
1,892,615	+				+0.1
1,892,615	+				-0.2
1,892,615	+				+0.5
1,892,616	-				+0.1
1,892,616	-				-0.5
1,892,616	-				+0.3
1,892,616	-				+1.8
1,892,672	+				-0.2
1,892,738	+				+1.5
1,892,738	+				+2.3
1,892,738	+				-0.2
1,892,738	+				+0.7
1,892,738	+				-0.0
1,892,738	+				-0.3
1,892,738	+				-0.5
1,892,739	-				+2.1
1,892,739	-				+0.1
1,892,879	+		Psyr_1684	0.19	+0.7
1,892,879	+		Psyr_1684	0.19	+2.7
1,892,879	+		Psyr_1684	0.19	+0.7
1,892,879	+		Psyr_1684	0.19	+0.6
1,892,879	+		Psyr_1684	0.19	+0.3
1,892,879	+		Psyr_1684	0.19	-0.2
1,892,880	-		Psyr_1684	0.19	+0.5
1,892,880	-		Psyr_1684	0.19	-1.2
1,892,880	-		Psyr_1684	0.19	-0.4
1,892,880	-		Psyr_1684	0.19	+3.7
1,892,880	-		Psyr_1684	0.19	-2.2
1,892,935	+		Psyr_1684	0.25	-0.4
1,892,935	+		Psyr_1684	0.25	-0.2
1,892,935	+		Psyr_1684	0.25	+0.5
1,892,936	-		Psyr_1684	0.25	-0.9
1,892,936	-		Psyr_1684	0.25	+0.1
1,892,985	-		Psyr_1684	0.29	-1.5
1,893,012	+		Psyr_1684	0.32	+1.5
1,893,012	+		Psyr_1684	0.32	+2.1
1,893,012	+		Psyr_1684	0.32	+0.6
1,893,012	+		Psyr_1684	0.32	+0.8
1,893,013	-		Psyr_1684	0.32	+0.3
1,893,013	-		Psyr_1684	0.32	-0.8
1,893,013	-		Psyr_1684	0.32	-1.5
1,893,013	-		Psyr_1684	0.32	-1.5
1,893,024	+		Psyr_1684	0.33	+0.4
1,893,053	+		Psyr_1684	0.36	-0.9
1,893,053	+		Psyr_1684	0.36	+0.5
1,893,054	-		Psyr_1684	0.36	+0.5
1,893,054	-		Psyr_1684	0.36	-0.1
1,893,054	-		Psyr_1684	0.36	-0.6
1,893,155	+		Psyr_1684	0.45	+0.4
1,893,155	+		Psyr_1684	0.45	+0.4
1,893,155	+		Psyr_1684	0.45	+0.2
1,893,156	-		Psyr_1684	0.45	-0.7
1,893,156	-		Psyr_1684	0.45	+0.2
1,893,156	-		Psyr_1684	0.45	+0.2
1,893,159	+		Psyr_1684	0.46	-1.5
1,893,159	+		Psyr_1684	0.46	+0.6
1,893,159	+		Psyr_1684	0.46	+0.3
1,893,159	+		Psyr_1684	0.46	-2.6
1,893,160	-		Psyr_1684	0.46	+0.0
1,893,160	-		Psyr_1684	0.46	-1.9
1,893,160	-		Psyr_1684	0.46	-1.3
1,893,160	-		Psyr_1684	0.46	-0.9
1,893,160	-		Psyr_1684	0.46	+1.5
1,893,160	-		Psyr_1684	0.46	-0.1
1,893,493	-		Psyr_1684	0.77	+0.5
1,893,624	+		Psyr_1684	0.89	-1.5
1,893,624	+		Psyr_1684	0.89	+1.6
1,893,624	+		Psyr_1684	0.89	+0.4
1,893,624	+		Psyr_1684	0.89	+0.7
1,893,625	-		Psyr_1684	0.89	-0.1
1,893,625	-		Psyr_1684	0.89	-0.7
1,893,625	-		Psyr_1684	0.89	+2.8
1,893,625	-		Psyr_1684	0.89	+0.8
1,893,676	+				-0.3
1,893,676	+				+1.5
1,893,798	+				-1.8