Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1540

Experiment: KB with Dimethyl Sulfoxide 1.25 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Dimethyl Sulfoxide 1.25 vol%
1,733,646	+		Psyr_1539	0.69	+0.3
1,733,698	+		Psyr_1539	0.72	-0.1
1,733,699	-		Psyr_1539	0.72	-0.3
1,733,739	+		Psyr_1539	0.74	+2.1
1,733,896	+		Psyr_1539	0.82	-0.0
1,733,896	+		Psyr_1539	0.82	-0.1
1,733,896	+		Psyr_1539	0.82	-1.2
1,733,896	+		Psyr_1539	0.82	+2.0
1,733,896	+		Psyr_1539	0.82	+2.8
1,733,898	+		Psyr_1539	0.82	-2.8
1,733,899	-		Psyr_1539	0.82	-0.4
1,733,899	-		Psyr_1539	0.82	-0.7
1,733,926	+		Psyr_1539	0.84	+0.2
1,733,926	+		Psyr_1539	0.84	-1.2
1,733,926	+		Psyr_1539	0.84	+0.4
1,733,927	-		Psyr_1539	0.84	+0.2
1,733,941	-		Psyr_1539	0.84	+1.4
1,734,010	+		Psyr_1539	0.88	+2.0
1,734,011	-		Psyr_1539	0.88	+0.8
1,734,011	-		Psyr_1539	0.88	-0.4
1,734,011	-		Psyr_1539	0.88	+0.5
1,734,011	-		Psyr_1539	0.88	-0.3
1,734,079	+				-0.3
1,734,080	-				-0.3
1,734,080	-				-0.0
1,734,080	-				+2.4
1,734,080	-				+1.9
1,734,096	+				-0.2
1,734,096	+				-0.7
1,734,096	+				-0.6
1,734,096	+				+0.8
1,734,096	+				+1.2
1,734,096	+				+1.4
1,734,096	+				-0.1
1,734,376	-				-0.8
1,734,379	+				+0.9
1,734,379	+				-0.6
1,734,379	+				+0.2
1,734,379	+				+1.6
1,734,380	-				+0.9
1,734,380	-				-0.3
1,734,380	-				-2.0
1,734,380	-				-0.2
1,734,380	-				+0.8
1,734,380	-				+0.4
1,734,391	+				-0.1
1,734,391	+				-0.1
1,734,391	+				-2.2
1,734,392	-				+0.8
1,734,392	-				-0.7
1,734,392	-				+0.0
1,734,392	-				-1.6
1,734,395	+				-0.8
1,734,466	+				-1.1
1,734,467	-				-0.2
1,734,494	+				-0.4
1,734,494	+				+2.2
1,734,494	+				+0.8
1,734,494	+				-0.0
1,734,494	+				+0.4
1,734,494	+				-0.3
1,734,495	-				+1.2
1,734,495	-				+0.8
1,734,495	-				+1.3
1,734,495	-				+0.7
1,734,495	-				-0.3
1,734,495	-				+0.1
1,734,495	-				-1.3
1,734,495	-				+0.6
1,734,495	-				+0.5
1,734,495	-				-0.3
1,734,495	-				+0.7
1,734,495	-				-0.4
1,734,613	+				-1.2
1,734,613	+				+1.2
1,734,613	+				-0.1
1,734,614	-				+0.3
1,734,614	-				+0.2
1,734,614	-				-0.2
1,734,767	+		Psyr_1540	0.56	+0.7
1,734,789	+		Psyr_1540	0.64	-0.2
1,734,790	-		Psyr_1540	0.64	+1.0
1,734,803	+		Psyr_1540	0.69	-1.1
1,734,803	+		Psyr_1540	0.69	-0.8
1,734,804	-		Psyr_1540	0.70	-1.5
1,734,822	-		Psyr_1540	0.76	-1.6
1,734,926	+				-0.0
1,734,926	+				+4.1
1,734,927	-				-1.8
1,735,043	+		Psyr_1541	0.18	-0.3
1,735,044	-		Psyr_1541	0.18	-1.5
1,735,044	-		Psyr_1541	0.18	+1.2
1,735,143	+		Psyr_1541	0.35	-0.0
1,735,144	-		Psyr_1541	0.35	-0.7
1,735,211	+		Psyr_1541	0.47	+0.2
1,735,211	+		Psyr_1541	0.47	+0.4
1,735,211	+		Psyr_1541	0.47	+0.9
1,735,280	+		Psyr_1541	0.59	-0.6
1,735,281	-		Psyr_1541	0.59	+1.3
1,735,281	-		Psyr_1541	0.59	-1.1
1,735,288	+		Psyr_1541	0.60	+0.2
1,735,288	+		Psyr_1541	0.60	-1.0
1,735,289	-		Psyr_1541	0.60	-0.5
1,735,289	-		Psyr_1541	0.60	-1.0
1,735,289	-		Psyr_1541	0.60	+0.5
1,735,405	+		Psyr_1541	0.80	+1.3
1,735,405	+		Psyr_1541	0.80	+0.5
1,735,405	+		Psyr_1541	0.80	+0.1
1,735,405	+		Psyr_1541	0.80	-0.3
1,735,405	+		Psyr_1541	0.80	+1.2
1,735,406	-		Psyr_1541	0.80	+0.3
1,735,453	+		Psyr_1541	0.88	+1.0
1,735,485	+				+3.5
1,735,486	-				+0.5
1,735,547	+				+0.3
1,735,660	+				-0.5
1,735,696	-				-0.1
1,735,731	+				+0.9
1,735,741	+				+1.0
1,735,741	+				-0.2
1,735,741	+				-0.8
1,735,742	-				-0.3
1,735,782	+				-0.8
1,735,782	+				-1.8
1,735,783	-				-0.3
1,735,783	-				-0.0
1,735,783	-				+1.2
1,735,794	-				+0.2