Experiment: KB with Dimethyl Sulfoxide 1.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0371 and Psyr_0372 overlap by 4 nucleotides Psyr_0372 and Psyr_0373 overlap by 1 nucleotides Psyr_0373 and Psyr_0374 are separated by 433 nucleotides
Psyr_0371: Psyr_0371 - conserved hypothetical protein, at 395,102 to 396,481
_0371
Psyr_0372: Psyr_0372 - CDS, at 396,478 to 396,747
_0372
Psyr_0373: Psyr_0373 - CDS, at 396,747 to 397,178
_0373
Psyr_0374: Psyr_0374 - Phosphorylase, at 397,612 to 400,062
_0374
Position (kb) 396
397 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 395.688 kb on + strand, within Psyr_0371 at 395.688 kb on + strand, within Psyr_0371 at 395.688 kb on + strand, within Psyr_0371 at 395.688 kb on + strand, within Psyr_0371 at 395.688 kb on + strand, within Psyr_0371 at 395.689 kb on - strand, within Psyr_0371 at 395.830 kb on - strand, within Psyr_0371 at 396.165 kb on + strand, within Psyr_0371 at 396.165 kb on + strand, within Psyr_0371 at 396.165 kb on + strand, within Psyr_0371 at 396.165 kb on + strand, within Psyr_0371 at 396.166 kb on - strand, within Psyr_0371 at 396.166 kb on - strand, within Psyr_0371 at 396.238 kb on - strand, within Psyr_0371 at 396.238 kb on - strand, within Psyr_0371 at 396.238 kb on - strand, within Psyr_0371 at 396.272 kb on + strand, within Psyr_0371 at 396.272 kb on + strand, within Psyr_0371 at 396.272 kb on + strand, within Psyr_0371 at 396.272 kb on + strand, within Psyr_0371 at 396.272 kb on + strand, within Psyr_0371 at 396.273 kb on - strand, within Psyr_0371 at 396.273 kb on - strand, within Psyr_0371 at 396.273 kb on - strand, within Psyr_0371 at 396.273 kb on - strand, within Psyr_0371 at 396.273 kb on - strand, within Psyr_0371 at 396.273 kb on - strand, within Psyr_0371 at 396.273 kb on - strand, within Psyr_0371 at 396.482 kb on - strand at 396.566 kb on + strand, within Psyr_0372 at 396.567 kb on - strand, within Psyr_0372 at 396.588 kb on + strand, within Psyr_0372 at 396.589 kb on - strand, within Psyr_0372 at 396.589 kb on - strand, within Psyr_0372 at 397.123 kb on + strand, within Psyr_0373 at 397.123 kb on + strand, within Psyr_0373 at 397.124 kb on - strand, within Psyr_0373 at 397.140 kb on + strand at 397.140 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.222 kb on + strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.223 kb on - strand at 397.224 kb on + strand at 397.224 kb on + strand at 397.224 kb on + strand at 397.224 kb on + strand at 397.224 kb on + strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.225 kb on - strand at 397.226 kb on + strand at 397.226 kb on + strand at 397.226 kb on + strand at 397.226 kb on + strand at 397.226 kb on + strand at 397.226 kb on + strand at 397.227 kb on - strand at 397.227 kb on - strand at 397.227 kb on - strand at 397.227 kb on - strand at 397.227 kb on - strand at 397.227 kb on - strand at 397.249 kb on + strand at 397.257 kb on + strand at 397.258 kb on - strand at 397.258 kb on - strand at 397.335 kb on - strand at 397.488 kb on + strand at 397.489 kb on - strand at 397.590 kb on + strand at 397.591 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Dimethyl Sulfoxide 1.25 vol% remove 395,688 + Psyr_0371 0.42 -1.5 395,688 + Psyr_0371 0.42 +0.4 395,688 + Psyr_0371 0.42 +0.7 395,688 + Psyr_0371 0.42 +0.4 395,688 + Psyr_0371 0.42 -0.7 395,689 - Psyr_0371 0.43 +1.2 395,830 - Psyr_0371 0.53 -1.6 396,165 + Psyr_0371 0.77 +1.2 396,165 + Psyr_0371 0.77 -1.1 396,165 + Psyr_0371 0.77 +2.2 396,165 + Psyr_0371 0.77 +0.6 396,166 - Psyr_0371 0.77 +1.5 396,166 - Psyr_0371 0.77 +0.3 396,238 - Psyr_0371 0.82 -0.2 396,238 - Psyr_0371 0.82 +0.6 396,238 - Psyr_0371 0.82 +0.2 396,272 + Psyr_0371 0.85 +0.2 396,272 + Psyr_0371 0.85 -1.3 396,272 + Psyr_0371 0.85 -0.3 396,272 + Psyr_0371 0.85 +0.9 396,272 + Psyr_0371 0.85 -1.8 396,273 - Psyr_0371 0.85 -0.1 396,273 - Psyr_0371 0.85 -0.3 396,273 - Psyr_0371 0.85 +0.4 396,273 - Psyr_0371 0.85 -0.8 396,273 - Psyr_0371 0.85 -0.2 396,273 - Psyr_0371 0.85 -0.3 396,273 - Psyr_0371 0.85 +2.8 396,482 - +0.4 396,566 + Psyr_0372 0.33 -0.3 396,567 - Psyr_0372 0.33 -2.3 396,588 + Psyr_0372 0.41 -0.1 396,589 - Psyr_0372 0.41 -1.3 396,589 - Psyr_0372 0.41 -1.6 397,123 + Psyr_0373 0.87 -0.9 397,123 + Psyr_0373 0.87 +0.3 397,124 - Psyr_0373 0.87 +0.4 397,140 + -1.1 397,140 + +0.3 397,222 + -1.6 397,222 + +0.2 397,222 + +0.2 397,222 + +0.7 397,222 + +0.2 397,222 + +0.7 397,222 + -0.1 397,222 + +2.8 397,222 + -1.0 397,222 + -0.8 397,222 + +0.5 397,222 + -0.4 397,222 + +2.1 397,222 + +0.0 397,222 + -0.6 397,222 + -2.2 397,223 - -0.6 397,223 - +0.2 397,223 - -1.3 397,223 - -1.7 397,223 - +0.7 397,223 - -0.5 397,223 - -0.6 397,223 - +1.1 397,223 - +2.1 397,223 - -0.1 397,223 - +2.5 397,223 - +0.8 397,223 - -2.0 397,223 - +0.7 397,223 - +0.5 397,224 + +0.2 397,224 + +1.2 397,224 + +0.0 397,224 + +1.1 397,224 + +0.1 397,225 - -1.3 397,225 - +0.5 397,225 - -0.2 397,225 - -1.5 397,225 - -1.4 397,225 - +0.4 397,225 - +0.3 397,225 - +0.8 397,225 - +1.2 397,225 - -0.8 397,225 - -1.4 397,225 - -1.1 397,225 - +2.0 397,225 - -0.5 397,225 - +0.8 397,226 + +0.7 397,226 + -0.3 397,226 + +2.8 397,226 + +0.6 397,226 + +1.6 397,226 + -2.3 397,227 - -0.2 397,227 - +0.6 397,227 - -0.2 397,227 - -0.5 397,227 - -2.9 397,227 - -0.4 397,249 + -1.0 397,257 + +0.0 397,258 - +0.9 397,258 - -1.9 397,335 - -0.1 397,488 + -0.1 397,489 - -1.0 397,590 + -0.3 397,591 - -1.2
Or see this region's nucleotide sequence