Experiment: KB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4211 and Psyr_4212 are separated by 50 nucleotides Psyr_4212 and Psyr_4213 overlap by 4 nucleotides Psyr_4213 and Psyr_4214 overlap by 4 nucleotides
Psyr_4211: Psyr_4211 - extracellular solute-binding protein, family 5, at 5,015,990 to 5,017,504
_4211
Psyr_4212: Psyr_4212 - Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal, at 5,017,555 to 5,018,535
_4212
Psyr_4213: Psyr_4213 - Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal, at 5,018,532 to 5,019,524
_4213
Psyr_4214: Psyr_4214 - Binding-protein-dependent transport systems inner membrane component, at 5,019,521 to 5,020,384
_4214
Position (kb) 5017
5018
5019 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5016.972 kb on + strand, within Psyr_4211 at 5016.972 kb on + strand, within Psyr_4211 at 5016.973 kb on - strand, within Psyr_4211 at 5016.973 kb on - strand, within Psyr_4211 at 5016.973 kb on - strand, within Psyr_4211 at 5017.085 kb on - strand, within Psyr_4211 at 5017.122 kb on + strand, within Psyr_4211 at 5017.239 kb on + strand, within Psyr_4211 at 5017.239 kb on + strand, within Psyr_4211 at 5017.240 kb on - strand, within Psyr_4211 at 5017.240 kb on - strand, within Psyr_4211 at 5017.310 kb on + strand, within Psyr_4211 at 5017.310 kb on + strand, within Psyr_4211 at 5017.310 kb on + strand, within Psyr_4211 at 5017.311 kb on - strand, within Psyr_4211 at 5017.311 kb on - strand, within Psyr_4211 at 5017.329 kb on + strand, within Psyr_4211 at 5017.329 kb on + strand, within Psyr_4211 at 5017.330 kb on - strand, within Psyr_4211 at 5017.330 kb on - strand, within Psyr_4211 at 5017.330 kb on - strand, within Psyr_4211 at 5017.504 kb on + strand at 5017.504 kb on + strand at 5017.505 kb on - strand at 5017.505 kb on - strand at 5017.778 kb on + strand, within Psyr_4212 at 5017.778 kb on + strand, within Psyr_4212 at 5017.779 kb on - strand, within Psyr_4212 at 5017.841 kb on + strand, within Psyr_4212 at 5017.841 kb on + strand, within Psyr_4212 at 5017.841 kb on + strand, within Psyr_4212 at 5017.841 kb on + strand, within Psyr_4212 at 5017.841 kb on + strand, within Psyr_4212 at 5017.841 kb on + strand, within Psyr_4212 at 5017.841 kb on + strand, within Psyr_4212 at 5017.841 kb on + strand, within Psyr_4212 at 5017.841 kb on + strand, within Psyr_4212 at 5017.841 kb on + strand, within Psyr_4212 at 5017.842 kb on - strand, within Psyr_4212 at 5017.842 kb on - strand, within Psyr_4212 at 5017.842 kb on - strand, within Psyr_4212 at 5017.842 kb on - strand, within Psyr_4212 at 5017.842 kb on - strand, within Psyr_4212 at 5017.842 kb on - strand, within Psyr_4212 at 5017.842 kb on - strand, within Psyr_4212 at 5018.325 kb on + strand, within Psyr_4212 at 5018.326 kb on - strand, within Psyr_4212 at 5018.326 kb on - strand, within Psyr_4212 at 5018.326 kb on - strand, within Psyr_4212 at 5018.521 kb on + strand at 5018.522 kb on - strand at 5018.614 kb on - strand at 5018.770 kb on + strand, within Psyr_4213 at 5018.770 kb on + strand, within Psyr_4213 at 5018.770 kb on + strand, within Psyr_4213 at 5018.770 kb on + strand, within Psyr_4213 at 5018.771 kb on - strand, within Psyr_4213 at 5018.833 kb on + strand, within Psyr_4213 at 5018.834 kb on - strand, within Psyr_4213 at 5018.834 kb on - strand, within Psyr_4213 at 5018.834 kb on - strand, within Psyr_4213 at 5019.071 kb on + strand, within Psyr_4213 at 5019.519 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB remove 5,016,972 + Psyr_4211 0.65 -1.5 5,016,972 + Psyr_4211 0.65 +0.4 5,016,973 - Psyr_4211 0.65 -2.0 5,016,973 - Psyr_4211 0.65 -0.6 5,016,973 - Psyr_4211 0.65 +0.0 5,017,085 - Psyr_4211 0.72 +1.8 5,017,122 + Psyr_4211 0.75 +2.1 5,017,239 + Psyr_4211 0.82 +0.9 5,017,239 + Psyr_4211 0.82 +0.7 5,017,240 - Psyr_4211 0.83 -0.4 5,017,240 - Psyr_4211 0.83 -0.6 5,017,310 + Psyr_4211 0.87 +0.9 5,017,310 + Psyr_4211 0.87 -2.1 5,017,310 + Psyr_4211 0.87 +0.1 5,017,311 - Psyr_4211 0.87 -1.8 5,017,311 - Psyr_4211 0.87 -0.9 5,017,329 + Psyr_4211 0.88 -0.8 5,017,329 + Psyr_4211 0.88 -0.4 5,017,330 - Psyr_4211 0.88 -0.4 5,017,330 - Psyr_4211 0.88 +0.4 5,017,330 - Psyr_4211 0.88 -0.1 5,017,504 + -1.3 5,017,504 + +0.3 5,017,505 - +0.0 5,017,505 - -0.5 5,017,778 + Psyr_4212 0.23 +0.9 5,017,778 + Psyr_4212 0.23 +0.7 5,017,779 - Psyr_4212 0.23 +0.9 5,017,841 + Psyr_4212 0.29 -0.1 5,017,841 + Psyr_4212 0.29 +0.7 5,017,841 + Psyr_4212 0.29 -0.7 5,017,841 + Psyr_4212 0.29 -0.9 5,017,841 + Psyr_4212 0.29 +0.5 5,017,841 + Psyr_4212 0.29 -0.6 5,017,841 + Psyr_4212 0.29 +0.9 5,017,841 + Psyr_4212 0.29 +0.6 5,017,841 + Psyr_4212 0.29 +0.8 5,017,841 + Psyr_4212 0.29 +0.6 5,017,842 - Psyr_4212 0.29 +0.5 5,017,842 - Psyr_4212 0.29 +0.4 5,017,842 - Psyr_4212 0.29 +0.4 5,017,842 - Psyr_4212 0.29 +2.5 5,017,842 - Psyr_4212 0.29 +0.1 5,017,842 - Psyr_4212 0.29 -0.5 5,017,842 - Psyr_4212 0.29 -0.5 5,018,325 + Psyr_4212 0.78 +0.0 5,018,326 - Psyr_4212 0.79 +0.4 5,018,326 - Psyr_4212 0.79 +0.4 5,018,326 - Psyr_4212 0.79 +3.3 5,018,521 + -0.6 5,018,522 - -1.5 5,018,614 - +0.5 5,018,770 + Psyr_4213 0.24 -0.5 5,018,770 + Psyr_4213 0.24 +0.1 5,018,770 + Psyr_4213 0.24 -1.6 5,018,770 + Psyr_4213 0.24 +0.6 5,018,771 - Psyr_4213 0.24 -1.6 5,018,833 + Psyr_4213 0.30 -3.1 5,018,834 - Psyr_4213 0.30 +2.3 5,018,834 - Psyr_4213 0.30 +0.2 5,018,834 - Psyr_4213 0.30 +1.1 5,019,071 + Psyr_4213 0.54 -0.8 5,019,519 - +1.6
Or see this region's nucleotide sequence