Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3878

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
4,617,873	-		Psyr_3877	0.14	-0.6
4,618,111	-		Psyr_3877	0.35	+0.0
4,618,253	+		Psyr_3877	0.48	+0.2
4,618,253	+		Psyr_3877	0.48	-1.6
4,618,254	-		Psyr_3877	0.48	-0.8
4,618,254	-		Psyr_3877	0.48	-0.3
4,618,254	-		Psyr_3877	0.48	+0.9
4,618,254	-		Psyr_3877	0.48	+0.6
4,618,298	+		Psyr_3877	0.52	+0.7
4,618,299	-		Psyr_3877	0.52	+0.2
4,618,508	+		Psyr_3877	0.71	+0.9
4,618,509	-		Psyr_3877	0.71	-0.5
4,618,509	-		Psyr_3877	0.71	-1.4
4,618,739	+				-1.4
4,618,824	+				-0.8
4,618,824	+				-0.5
4,618,824	+				+0.9
4,618,824	+				+1.1
4,618,824	+				+0.9
4,618,824	+				-0.7
4,618,825	-				-1.7
4,618,825	-				-0.4
4,618,825	-				+2.7
4,618,825	-				+0.3
4,618,825	-				-0.2
4,618,825	-				-1.2
4,618,825	-				-0.4
4,618,825	-				+5.2
4,618,825	-				+0.9
4,618,825	-				+1.3
4,618,825	-				-0.5
4,618,825	-				-0.6
4,618,850	+				+1.8
4,618,850	+				+1.9
4,618,851	-				+1.6
4,618,851	-				+0.2
4,618,851	-				+0.1
4,618,851	-				-0.5
4,618,851	-				-1.1
4,618,851	-				-0.2
4,618,884	-				-1.8
4,619,240	+		Psyr_3878	0.51	+0.0
4,619,240	+		Psyr_3878	0.51	+1.2
4,619,241	-		Psyr_3878	0.52	+0.4
4,619,374	+		Psyr_3878	0.69	+0.7
4,619,374	+		Psyr_3878	0.69	+1.4
4,619,374	+		Psyr_3878	0.69	-0.7
4,619,374	+		Psyr_3878	0.69	-1.0
4,619,374	+		Psyr_3878	0.69	-1.3
4,619,374	+		Psyr_3878	0.69	-0.3
4,619,374	+		Psyr_3878	0.69	-0.1
4,619,375	-		Psyr_3878	0.69	+2.1
4,619,375	-		Psyr_3878	0.69	+0.3
4,619,375	-		Psyr_3878	0.69	+0.6
4,619,375	-		Psyr_3878	0.69	+0.6
4,619,505	+		Psyr_3878	0.86	-2.8
4,619,506	-		Psyr_3878	0.86	+2.3
4,619,609	+				-0.9
4,619,610	-				-1.5
4,619,610	-				-0.6
4,619,626	+				-1.0
4,619,685	+		Psyr_3879	0.12	+2.5
4,619,685	+		Psyr_3879	0.12	+0.9
4,619,685	+		Psyr_3879	0.12	-0.4
4,619,685	+		Psyr_3879	0.12	+0.4
4,619,685	+		Psyr_3879	0.12	-0.7
4,619,685	+		Psyr_3879	0.12	-1.2
4,619,686	-		Psyr_3879	0.12	+1.2
4,619,686	-		Psyr_3879	0.12	-2.0
4,620,120	+				+0.1
4,620,397	+				-0.8
4,620,397	+				-0.5
4,620,398	-				-0.0
4,620,405	+				-1.8
4,620,405	+				+1.3
4,620,405	+				-0.9
4,620,406	-				+0.5
4,620,406	-				-1.1
4,620,410	+				+0.8
4,620,410	+				-0.3
4,620,410	+				+0.2
4,620,411	-				-0.7
4,620,413	+				+1.6
4,620,439	-				-0.4
4,620,607	+				-0.5
4,620,607	+				+1.8