Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3792

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
4,507,344	+		Psyr_3791	0.40	-2.3
4,507,356	-		Psyr_3791	0.41	+0.1
4,507,406	-		Psyr_3791	0.45	-0.7
4,507,420	-		Psyr_3791	0.46	+0.2
4,507,420	-		Psyr_3791	0.46	-1.0
4,508,078	-				-2.3
4,508,092	+				+0.0
4,508,153	+				+1.5
4,508,154	-				-0.7
4,508,174	+				+0.9
4,508,174	+				-0.2
4,508,175	-				-0.1
4,508,175	-				-0.0
4,508,184	+				-0.5
4,508,184	+				-2.3
4,508,184	+				-0.2
4,508,345	-				+0.6
4,508,345	-				-0.8
4,508,614	-		Psyr_3792	0.25	-0.2
4,508,929	+		Psyr_3792	0.51	-0.3
4,508,929	+		Psyr_3792	0.51	+0.6
4,508,929	+		Psyr_3792	0.51	-0.7
4,508,929	+		Psyr_3792	0.51	+0.3
4,508,929	+		Psyr_3792	0.51	-1.1
4,508,930	-		Psyr_3792	0.51	-0.8
4,509,044	+		Psyr_3792	0.60	-0.2
4,509,045	-		Psyr_3792	0.60	-0.7
4,509,117	+		Psyr_3792	0.66	-0.6
4,509,118	-		Psyr_3792	0.66	-2.3
4,509,118	-		Psyr_3792	0.66	+0.4
4,509,118	-		Psyr_3792	0.66	-0.8
4,509,118	-		Psyr_3792	0.66	+1.6
4,509,315	+		Psyr_3792	0.81	-0.7
4,509,316	-		Psyr_3792	0.81	-0.5
4,509,561	+				+0.1
4,509,561	+				+1.4
4,509,561	+				-1.9
4,509,561	+				-1.6
4,509,561	+				-0.1
4,509,561	+				+0.3
4,509,561	+				-0.2
4,509,561	+				-0.9
4,509,561	+				+0.2
4,509,561	+				+0.4
4,509,561	+				+0.1
4,509,561	+				+0.5
4,509,561	+				+2.0
4,509,561	+				+1.6
4,509,561	+				+0.7
4,509,561	+				+0.5
4,509,561	+				-3.9
4,509,561	+				+0.9
4,509,561	+				-0.2
4,509,561	+				-1.7
4,509,561	+				-0.3
4,509,561	+				-0.3
4,509,562	-				-0.6
4,509,562	-				-1.0
4,509,562	-				-1.3
4,509,562	-				+0.1
4,509,562	-				+0.6
4,509,562	-				-0.3
4,509,562	-				+1.0
4,509,562	-				-0.8
4,509,562	-				+0.6
4,509,562	-				-0.4
4,509,562	-				+0.1
4,509,562	-				+0.6
4,509,562	-				-0.2
4,509,562	-				+1.5
4,509,562	-				-0.7
4,509,563	+				-0.3
4,509,564	-				+0.6
4,509,941	+		Psyr_3793	0.58	-1.0
4,509,941	+		Psyr_3793	0.58	+1.5
4,509,942	-		Psyr_3793	0.58	+0.0
4,509,942	-		Psyr_3793	0.58	+0.9
4,509,972	+		Psyr_3793	0.62	+1.3
4,509,972	+		Psyr_3793	0.62	+0.6
4,509,972	+		Psyr_3793	0.62	+1.3
4,509,981	+		Psyr_3793	0.63	-0.8
4,510,306	+				+0.2
4,510,310	+				+1.9
4,510,316	+				+1.2
4,510,316	+				+0.2
4,510,316	+				-0.9
4,510,316	+				-0.3
4,510,472	+				-0.7
4,510,473	-				-1.3