Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2190

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
2,544,401	-				+0.0
2,544,401	-				+1.9
2,544,583	-				-0.6
2,544,726	-				+0.9
2,544,746	+				-0.6
2,544,746	+				+0.4
2,544,831	+		Psyr_2189	0.30	+0.7
2,544,832	-		Psyr_2189	0.31	+0.8
2,544,973	+		Psyr_2189	0.73	+0.1
2,544,973	+		Psyr_2189	0.73	+0.4
2,544,974	-		Psyr_2189	0.73	-0.8
2,544,974	-		Psyr_2189	0.73	+0.7
2,544,974	-		Psyr_2189	0.73	-1.2
2,544,974	-		Psyr_2189	0.73	-0.2
2,544,974	-		Psyr_2189	0.73	-0.1
2,544,974	-		Psyr_2189	0.73	+0.5
2,544,974	-		Psyr_2189	0.73	+0.0
2,544,978	+		Psyr_2189	0.74	-0.9
2,544,978	+		Psyr_2189	0.74	-0.0
2,544,978	+		Psyr_2189	0.74	-1.2
2,545,040	+				+0.2
2,545,222	+				-0.2
2,545,318	+		Psyr_2190	0.18	+2.0
2,545,321	+		Psyr_2190	0.18	+0.4
2,545,478	-		Psyr_2190	0.32	+1.2
2,545,671	-		Psyr_2190	0.50	+0.8
2,546,129	+				+0.4
2,546,129	+				+1.0
2,546,130	-				+0.9
2,546,187	-				-0.4
2,546,218	-				+1.1
2,546,262	+				-0.3
2,546,262	+				-0.3
2,546,262	+				+0.3
2,546,262	+				-0.2
2,546,262	+				+0.1
2,546,262	+				-0.7
2,546,262	+				-0.5
2,546,263	-				-0.6
2,546,263	-				+1.6
2,546,263	-				-0.6
2,546,263	-				+2.1
2,546,263	-				-0.9
2,546,263	-				-0.1
2,546,263	-				-0.2
2,546,263	-				+1.4
2,546,263	-				-0.6
2,546,263	-				+0.9
2,546,440	-		Psyr_2191	0.13	+0.9
2,546,441	+		Psyr_2191	0.13	-0.4
2,546,441	+		Psyr_2191	0.13	+0.5
2,546,441	+		Psyr_2191	0.13	-0.7
2,546,441	+		Psyr_2191	0.13	+0.0
2,546,441	+		Psyr_2191	0.13	-0.6
2,546,673	+				+0.3
2,546,768	+		Psyr_2191	0.35	-1.1
2,546,769	-		Psyr_2191	0.35	-0.2
2,546,769	-		Psyr_2191	0.35	+0.2
2,547,019	+		Psyr_2191	0.52	+0.6
2,547,020	-		Psyr_2191	0.52	+0.4
2,547,114	+		Psyr_2191	0.58	-0.0
2,547,114	+		Psyr_2191	0.58	-0.5
2,547,167	+		Psyr_2191	0.62	-1.7
2,547,167	+		Psyr_2191	0.62	-0.7
2,547,167	+		Psyr_2191	0.62	-0.5
2,547,168	-		Psyr_2191	0.62	+0.1
2,547,168	-		Psyr_2191	0.62	+0.9
2,547,168	-		Psyr_2191	0.62	+0.0
2,547,168	-		Psyr_2191	0.62	+0.4
2,547,168	-		Psyr_2191	0.62	-0.2
2,547,168	-		Psyr_2191	0.62	-0.7
2,547,168	-		Psyr_2191	0.62	+0.3
2,547,168	-		Psyr_2191	0.62	+0.6
2,547,168	-		Psyr_2191	0.62	+0.3
2,547,168	-		Psyr_2191	0.62	-1.6