Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2015

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
2,337,734	+				-0.3
2,337,734	+				-1.0
2,337,734	+				-0.5
2,337,735	-				-0.9
2,337,735	-				+0.6
2,337,744	+				-0.9
2,337,779	-				-0.3
2,338,122	+		Psyr_2014	0.68	-0.3
2,338,122	+		Psyr_2014	0.68	+1.6
2,338,124	+		Psyr_2014	0.68	-1.0
2,338,124	+		Psyr_2014	0.68	-0.5
2,338,125	-		Psyr_2014	0.68	+1.8
2,338,125	-		Psyr_2014	0.68	-0.4
2,338,125	-		Psyr_2014	0.68	+0.8
2,338,125	-		Psyr_2014	0.68	+0.9
2,338,314	+				+0.4
2,338,315	-				-2.0
2,338,315	-				+0.7
2,338,315	-				-0.7
2,338,315	-				+1.2
2,338,315	-				+0.1
2,338,328	+				-0.7
2,338,346	+				+1.1
2,338,389	-				+1.2
2,338,521	+				-1.0
2,338,521	+				+0.2
2,338,522	-				-1.5
2,338,522	-				+1.1
2,338,522	-				+0.1
2,338,583	+				+3.2
2,338,583	+				+0.3
2,338,701	+				-1.2
2,338,702	-				-0.2
2,338,728	+				-1.2
2,338,728	+				+1.4
2,338,728	+				+0.9
2,338,728	+				-0.7
2,338,728	+				-0.1
2,338,728	+				-2.6
2,338,729	-				+0.0
2,338,729	-				+0.3
2,338,729	-				+0.4
2,338,729	-				+0.3
2,338,729	-				+0.1
2,338,729	-				+0.6
2,338,729	-				-0.9
2,338,729	-				-0.3
2,338,729	-				+0.7
2,338,874	+		Psyr_2015	0.20	+1.4
2,338,979	+		Psyr_2015	0.28	+2.1
2,338,991	+		Psyr_2015	0.29	+1.0
2,338,991	+		Psyr_2015	0.29	-0.2
2,338,991	+		Psyr_2015	0.29	+3.2
2,338,992	-		Psyr_2015	0.29	-1.1
2,338,992	-		Psyr_2015	0.29	+0.0
2,339,187	-		Psyr_2015	0.44	-1.0
2,339,333	+		Psyr_2015	0.55	-0.2
2,339,333	+		Psyr_2015	0.55	+0.7
2,339,333	+		Psyr_2015	0.55	+1.3
2,339,333	+		Psyr_2015	0.55	-3.2
2,339,333	+		Psyr_2015	0.55	-0.6
2,339,333	+		Psyr_2015	0.55	-1.7
2,339,333	+		Psyr_2015	0.55	-2.0
2,339,333	+		Psyr_2015	0.55	+1.7
2,339,334	-		Psyr_2015	0.55	+0.3
2,339,334	-		Psyr_2015	0.55	+1.1
2,339,334	-		Psyr_2015	0.55	+0.6
2,339,334	-		Psyr_2015	0.55	+0.5
2,339,334	-		Psyr_2015	0.55	-0.1
2,339,334	-		Psyr_2015	0.55	+0.5
2,339,334	-		Psyr_2015	0.55	+2.4
2,339,334	-		Psyr_2015	0.55	+0.2
2,339,414	+		Psyr_2015	0.61	+0.4
2,339,414	+		Psyr_2015	0.61	-0.5
2,339,414	+		Psyr_2015	0.61	+1.1
2,339,415	-		Psyr_2015	0.61	-1.2
2,339,418	+		Psyr_2015	0.61	+0.8
2,339,418	+		Psyr_2015	0.61	+0.4
2,339,419	-		Psyr_2015	0.62	+0.4
2,339,419	-		Psyr_2015	0.62	-0.0
2,339,419	-		Psyr_2015	0.62	+0.5
2,339,419	-		Psyr_2015	0.62	+0.4
2,339,419	-		Psyr_2015	0.62	+3.2
2,339,493	+		Psyr_2015	0.67	-0.2
2,339,494	-		Psyr_2015	0.67	-0.5
2,339,519	+		Psyr_2015	0.69	+0.8
2,339,520	-		Psyr_2015	0.69	+0.6
2,339,883	+				-0.9
2,339,979	+				-0.5
2,339,981	+				-0.1
2,339,995	+				+0.3
2,339,995	+				-2.2
2,339,995	+				-0.9
2,339,996	-				-0.6
2,339,996	-				-0.9
2,340,018	+				-0.0
2,340,018	+				-2.0
2,340,018	+				-1.1
2,340,019	-				+1.3
2,340,019	-				+0.5
2,340,019	-				+0.7
2,340,258	+				-0.3
2,340,258	+				-1.0
2,340,258	+				-0.2
2,340,258	+				+0.8
2,340,292	+				-0.3
2,340,311	+				+0.6
2,340,311	+				-0.1
2,340,312	-				-0.0
2,340,312	-				-1.1
2,340,333	-				-1.5
2,340,333	-				-0.5
2,340,354	+				-1.0
2,340,355	-				-1.0
2,340,563	-				+1.0
2,340,563	-				+0.0
2,340,564	+				+1.0
2,340,564	+				-0.3
2,340,564	+				+0.8
2,340,564	+				+0.1
2,340,564	+				+1.3
2,340,565	-				+0.5
2,340,565	-				-0.0
2,340,565	-				-2.2
2,340,565	-				+1.2
2,340,565	-				-0.3
2,340,590	+				-0.1
2,340,590	+				-0.1
2,340,591	-				-2.0
2,340,591	-				-0.9
2,340,591	-				-1.4
2,340,591	-				+0.2
2,340,672	+				+2.8
2,340,672	+				+0.4