Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1369

Experiment: KB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB
1,551,633	+				+0.4
1,551,633	+				-1.2
1,551,633	+				+2.0
1,551,633	+				-1.0
1,551,633	+				+1.1
1,551,634	-				+0.3
1,551,634	-				-0.2
1,551,634	-				-0.7
1,551,643	+				-2.8
1,551,643	+				-1.3
1,551,643	+				-0.4
1,551,643	+				+0.6
1,551,644	-				+2.6
1,551,644	-				-0.6
1,551,644	-				+0.7
1,551,644	-				+0.6
1,551,655	+				-0.0
1,551,655	+				+2.4
1,551,655	+				-0.7
1,551,655	+				+0.2
1,551,656	-				-0.2
1,551,656	-				-0.6
1,551,656	-				+0.1
1,551,656	-				+0.2
1,551,657	+				+0.4
1,551,657	+				+0.8
1,551,657	+				+0.8
1,551,657	+				+3.5
1,551,657	+				+0.6
1,551,657	+				-1.3
1,551,657	+				+2.2
1,551,657	+				+0.2
1,551,657	+				-0.0
1,551,657	+				+2.6
1,551,657	+				-1.8
1,551,658	-				-1.1
1,551,658	-				+2.6
1,551,658	-				-0.2
1,551,658	-				+0.7
1,551,658	-				+2.0
1,551,658	-				-0.0
1,551,658	-				+1.0
1,551,658	-				+0.5
1,551,658	-				-1.0
1,551,658	-				-0.1
1,551,735	+				-0.7
1,551,783	+		Psyr_1368	0.12	+0.8
1,551,828	+		Psyr_1368	0.17	-1.9
1,551,828	+		Psyr_1368	0.17	-0.7
1,551,828	+		Psyr_1368	0.17	-1.1
1,551,828	+		Psyr_1368	0.17	-0.3
1,551,829	-		Psyr_1368	0.17	+0.7
1,551,852	-		Psyr_1368	0.20	+1.0
1,551,852	-		Psyr_1368	0.20	-2.0
1,551,930	-		Psyr_1368	0.29	-0.2
1,552,002	+		Psyr_1368	0.38	-3.3
1,552,002	+		Psyr_1368	0.38	-1.1
1,552,003	-		Psyr_1368	0.38	+1.3
1,552,003	-		Psyr_1368	0.38	-1.4
1,552,003	-		Psyr_1368	0.38	+1.6
1,552,026	+		Psyr_1368	0.41	-2.6
1,552,026	+		Psyr_1368	0.41	-0.7
1,552,026	+		Psyr_1368	0.41	+0.7
1,552,027	-		Psyr_1368	0.41	-0.2
1,552,027	-		Psyr_1368	0.41	-0.0
1,552,038	+		Psyr_1368	0.42	-1.3
1,552,053	+		Psyr_1368	0.44	+0.2
1,552,053	+		Psyr_1368	0.44	-0.0
1,552,053	+		Psyr_1368	0.44	-1.9
1,552,053	+		Psyr_1368	0.44	-1.0
1,552,054	-		Psyr_1368	0.44	-0.3
1,552,054	-		Psyr_1368	0.44	+1.4
1,552,054	-		Psyr_1368	0.44	-0.9
1,552,054	-		Psyr_1368	0.44	-0.8
1,552,054	-		Psyr_1368	0.44	-1.2
1,552,054	-		Psyr_1368	0.44	-1.6
1,552,461	+				+0.2
1,552,461	+				+0.6
1,552,461	+				+3.0
1,552,461	+				+0.6
1,552,462	-				-2.8
1,552,462	-				-1.3
1,552,462	-				+1.9
1,552,462	-				-2.2
1,552,524	+				+0.4
1,552,543	+				+1.0
1,552,543	+				+0.8
1,553,083	+				+0.7
1,553,531	-		Psyr_1370	0.45	+0.6
1,553,531	-		Psyr_1370	0.45	+3.2
1,553,657	-		Psyr_1370	0.57	-0.3
1,553,877	+		Psyr_1370	0.78	-0.5
1,553,877	+		Psyr_1370	0.78	-0.3
1,553,877	+		Psyr_1370	0.78	-0.5
1,553,877	+		Psyr_1370	0.78	-0.2
1,553,878	-		Psyr_1370	0.78	-0.1