Experiment: KB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0844 and Psyr_0845 are separated by 11 nucleotides Psyr_0845 and Psyr_0846 are separated by 397 nucleotides Psyr_0846 and Psyr_0847 are separated by 2 nucleotides Psyr_0847 and Psyr_0848 are separated by 47 nucleotides
Psyr_0844: Psyr_0844 - Protein of unknown function DUF446, at 957,017 to 957,346
_0844
Psyr_0845: Psyr_0845 - conserved hypothetical protein, at 957,358 to 957,774
_0845
Psyr_0846: Psyr_0846 - acetolactate synthase, large subunit, at 958,172 to 959,896
_0846
Psyr_0847: Psyr_0847 - acetolactate synthase, small subunit, at 959,899 to 960,390
_0847
Psyr_0848: Psyr_0848 - ketol-acid reductoisomerase, at 960,438 to 961,454
_0848
Position (kb) 958
959
960 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 957.266 kb on + strand, within Psyr_0844 at 957.267 kb on - strand, within Psyr_0844 at 957.267 kb on - strand, within Psyr_0844 at 957.267 kb on - strand, within Psyr_0844 at 957.267 kb on - strand, within Psyr_0844 at 957.360 kb on - strand at 957.369 kb on - strand at 957.369 kb on - strand at 957.710 kb on + strand, within Psyr_0845 at 957.711 kb on - strand, within Psyr_0845 at 957.711 kb on - strand, within Psyr_0845 at 957.711 kb on - strand, within Psyr_0845 at 957.809 kb on + strand at 957.814 kb on + strand at 957.814 kb on + strand at 957.814 kb on + strand at 957.814 kb on + strand at 957.814 kb on + strand at 957.814 kb on + strand at 957.814 kb on + strand at 957.924 kb on + strand at 957.924 kb on + strand at 957.956 kb on - strand at 957.956 kb on - strand at 957.987 kb on + strand at 958.004 kb on + strand at 958.052 kb on + strand at 958.052 kb on + strand at 958.053 kb on - strand at 958.053 kb on - strand at 958.075 kb on + strand at 958.075 kb on + strand at 958.113 kb on - strand at 958.113 kb on - strand at 958.118 kb on + strand at 958.118 kb on + strand at 958.118 kb on + strand at 958.118 kb on + strand at 958.118 kb on + strand at 958.119 kb on - strand at 958.119 kb on - strand at 958.119 kb on - strand at 958.119 kb on - strand at 958.119 kb on - strand at 958.121 kb on + strand at 958.121 kb on + strand at 958.121 kb on + strand at 958.158 kb on + strand at 958.182 kb on + strand at 958.182 kb on + strand at 958.182 kb on + strand at 958.183 kb on - strand at 958.234 kb on + strand at 958.234 kb on + strand at 958.234 kb on + strand at 958.234 kb on + strand at 958.234 kb on + strand at 958.234 kb on + strand at 958.234 kb on + strand at 958.234 kb on + strand at 958.234 kb on + strand at 958.235 kb on - strand at 958.235 kb on - strand at 958.235 kb on - strand at 958.235 kb on - strand at 958.235 kb on - strand at 958.235 kb on - strand at 958.235 kb on - strand at 958.235 kb on - strand at 958.238 kb on + strand at 958.238 kb on + strand at 958.238 kb on + strand at 958.238 kb on + strand at 958.238 kb on + strand at 958.238 kb on + strand at 958.238 kb on + strand at 958.238 kb on + strand at 958.238 kb on + strand at 958.239 kb on - strand at 958.239 kb on - strand at 958.239 kb on - strand at 958.239 kb on - strand at 958.239 kb on - strand at 958.239 kb on - strand at 958.239 kb on - strand at 958.239 kb on - strand at 958.239 kb on - strand at 958.239 kb on - strand at 958.239 kb on - strand at 958.239 kb on - strand at 958.271 kb on + strand at 958.272 kb on - strand at 958.439 kb on + strand, within Psyr_0846 at 958.439 kb on + strand, within Psyr_0846 at 958.439 kb on + strand, within Psyr_0846 at 958.439 kb on + strand, within Psyr_0846 at 958.439 kb on + strand, within Psyr_0846 at 958.440 kb on - strand, within Psyr_0846 at 958.440 kb on - strand, within Psyr_0846 at 958.440 kb on - strand, within Psyr_0846 at 958.440 kb on - strand, within Psyr_0846 at 958.486 kb on + strand, within Psyr_0846 at 958.610 kb on + strand, within Psyr_0846 at 958.610 kb on + strand, within Psyr_0846 at 958.611 kb on - strand, within Psyr_0846 at 958.611 kb on - strand, within Psyr_0846 at 958.611 kb on - strand, within Psyr_0846 at 958.611 kb on - strand, within Psyr_0846 at 958.611 kb on - strand, within Psyr_0846 at 958.691 kb on + strand, within Psyr_0846 at 958.691 kb on + strand, within Psyr_0846 at 958.691 kb on + strand, within Psyr_0846 at 958.692 kb on - strand, within Psyr_0846 at 958.798 kb on + strand, within Psyr_0846 at 958.961 kb on + strand, within Psyr_0846 at 958.961 kb on + strand, within Psyr_0846 at 958.961 kb on + strand, within Psyr_0846 at 958.961 kb on + strand, within Psyr_0846 at 958.962 kb on - strand, within Psyr_0846 at 958.962 kb on - strand, within Psyr_0846 at 958.962 kb on - strand, within Psyr_0846 at 958.969 kb on + strand, within Psyr_0846 at 959.267 kb on + strand, within Psyr_0846 at 959.345 kb on + strand, within Psyr_0846 at 959.345 kb on + strand, within Psyr_0846 at 959.345 kb on + strand, within Psyr_0846 at 959.345 kb on + strand, within Psyr_0846 at 959.345 kb on + strand, within Psyr_0846 at 959.345 kb on + strand, within Psyr_0846 at 959.345 kb on + strand, within Psyr_0846 at 959.345 kb on + strand, within Psyr_0846 at 959.345 kb on + strand, within Psyr_0846 at 959.346 kb on - strand, within Psyr_0846 at 959.346 kb on - strand, within Psyr_0846 at 959.346 kb on - strand, within Psyr_0846 at 959.346 kb on - strand, within Psyr_0846 at 959.346 kb on - strand, within Psyr_0846 at 959.346 kb on - strand, within Psyr_0846 at 959.346 kb on - strand, within Psyr_0846 at 959.346 kb on - strand, within Psyr_0846 at 959.390 kb on + strand, within Psyr_0846 at 959.390 kb on + strand, within Psyr_0846 at 959.391 kb on - strand, within Psyr_0846 at 959.391 kb on - strand, within Psyr_0846 at 959.391 kb on - strand, within Psyr_0846 at 959.391 kb on - strand, within Psyr_0846 at 959.393 kb on + strand, within Psyr_0846 at 959.393 kb on + strand, within Psyr_0846 at 959.567 kb on + strand, within Psyr_0846 at 959.568 kb on - strand, within Psyr_0846 at 959.642 kb on + strand, within Psyr_0846 at 959.642 kb on + strand, within Psyr_0846 at 959.666 kb on + strand, within Psyr_0846 at 959.666 kb on + strand, within Psyr_0846 at 959.666 kb on + strand, within Psyr_0846 at 959.666 kb on + strand, within Psyr_0846 at 959.666 kb on + strand, within Psyr_0846 at 959.666 kb on + strand, within Psyr_0846 at 959.667 kb on - strand, within Psyr_0846 at 959.667 kb on - strand, within Psyr_0846 at 959.708 kb on + strand, within Psyr_0846 at 959.709 kb on - strand, within Psyr_0846 at 959.728 kb on + strand at 959.866 kb on + strand at 959.867 kb on - strand at 959.894 kb on + strand at 959.894 kb on + strand at 959.894 kb on + strand at 959.894 kb on + strand at 959.894 kb on + strand at 959.894 kb on + strand at 959.894 kb on + strand at 959.894 kb on + strand at 959.895 kb on - strand at 959.895 kb on - strand at 959.895 kb on - strand at 959.895 kb on - strand at 959.895 kb on - strand at 959.895 kb on - strand at 959.895 kb on - strand at 959.895 kb on - strand at 959.907 kb on + strand at 959.976 kb on + strand, within Psyr_0847 at 959.976 kb on + strand, within Psyr_0847 at 959.977 kb on - strand, within Psyr_0847 at 959.977 kb on - strand, within Psyr_0847 at 959.977 kb on - strand, within Psyr_0847 at 959.980 kb on + strand, within Psyr_0847 at 959.980 kb on + strand, within Psyr_0847 at 959.980 kb on + strand, within Psyr_0847 at 959.980 kb on + strand, within Psyr_0847 at 959.980 kb on + strand, within Psyr_0847 at 959.980 kb on + strand, within Psyr_0847 at 959.980 kb on + strand, within Psyr_0847 at 959.980 kb on + strand, within Psyr_0847 at 959.981 kb on - strand, within Psyr_0847 at 959.981 kb on - strand, within Psyr_0847 at 959.981 kb on - strand, within Psyr_0847 at 959.981 kb on - strand, within Psyr_0847 at 959.981 kb on - strand, within Psyr_0847 at 959.981 kb on - strand, within Psyr_0847 at 959.981 kb on - strand, within Psyr_0847 at 960.050 kb on + strand, within Psyr_0847 at 960.050 kb on + strand, within Psyr_0847 at 960.051 kb on - strand, within Psyr_0847 at 960.051 kb on - strand, within Psyr_0847 at 960.257 kb on - strand, within Psyr_0847 at 960.388 kb on + strand at 960.388 kb on + strand at 960.397 kb on + strand at 960.398 kb on - strand at 960.398 kb on - strand at 960.398 kb on - strand at 960.423 kb on + strand at 960.702 kb on + strand, within Psyr_0848 at 960.702 kb on + strand, within Psyr_0848 at 960.703 kb on - strand, within Psyr_0848 at 960.703 kb on - strand, within Psyr_0848 at 960.703 kb on - strand, within Psyr_0848 at 960.774 kb on + strand, within Psyr_0848 at 960.894 kb on + strand, within Psyr_0848
Per-strain Table
Position Strand Gene LocusTag Fraction KB remove 957,266 + Psyr_0844 0.75 -0.8 957,267 - Psyr_0844 0.76 -1.7 957,267 - Psyr_0844 0.76 +0.1 957,267 - Psyr_0844 0.76 +0.8 957,267 - Psyr_0844 0.76 -0.6 957,360 - +0.5 957,369 - -1.1 957,369 - -1.4 957,710 + Psyr_0845 0.84 -2.1 957,711 - Psyr_0845 0.85 -0.4 957,711 - Psyr_0845 0.85 +1.0 957,711 - Psyr_0845 0.85 -1.6 957,809 + +0.1 957,814 + -2.1 957,814 + +0.8 957,814 + +1.4 957,814 + +0.2 957,814 + +0.6 957,814 + -0.1 957,814 + -1.8 957,924 + +1.9 957,924 + -0.2 957,956 - +1.1 957,956 - -0.9 957,987 + -1.5 958,004 + -1.5 958,052 + -1.4 958,052 + -1.5 958,053 - -0.2 958,053 - +0.7 958,075 + -0.2 958,075 + +0.1 958,113 - -1.1 958,113 - +2.1 958,118 + -2.1 958,118 + -0.1 958,118 + +0.9 958,118 + -0.9 958,118 + -0.8 958,119 - +1.1 958,119 - -0.5 958,119 - +2.4 958,119 - +0.2 958,119 - +0.1 958,121 + +0.5 958,121 + -1.5 958,121 + -0.2 958,158 + -0.4 958,182 + +0.8 958,182 + -0.6 958,182 + -0.2 958,183 - +0.3 958,234 + -0.8 958,234 + -2.3 958,234 + -0.4 958,234 + +0.4 958,234 + -0.9 958,234 + -0.6 958,234 + -0.2 958,234 + -0.9 958,234 + +0.3 958,235 - -2.1 958,235 - -0.4 958,235 - -1.6 958,235 - -0.9 958,235 - -1.9 958,235 - -1.5 958,235 - -0.0 958,235 - +0.9 958,238 + +1.8 958,238 + +1.6 958,238 + -3.1 958,238 + +1.1 958,238 + +0.4 958,238 + -2.4 958,238 + -0.9 958,238 + -0.2 958,238 + -1.0 958,239 - +2.5 958,239 - -2.2 958,239 - +0.1 958,239 - -0.9 958,239 - +0.9 958,239 - -1.6 958,239 - -0.6 958,239 - -0.3 958,239 - -0.6 958,239 - -0.5 958,239 - -0.2 958,239 - -1.5 958,271 + +1.2 958,272 - -1.4 958,439 + Psyr_0846 0.15 +2.1 958,439 + Psyr_0846 0.15 -0.6 958,439 + Psyr_0846 0.15 -1.0 958,439 + Psyr_0846 0.15 +0.4 958,439 + Psyr_0846 0.15 +0.8 958,440 - Psyr_0846 0.16 -0.5 958,440 - Psyr_0846 0.16 +0.1 958,440 - Psyr_0846 0.16 -1.1 958,440 - Psyr_0846 0.16 -2.9 958,486 + Psyr_0846 0.18 -0.9 958,610 + Psyr_0846 0.25 -1.5 958,610 + Psyr_0846 0.25 -0.9 958,611 - Psyr_0846 0.25 +0.4 958,611 - Psyr_0846 0.25 -1.7 958,611 - Psyr_0846 0.25 -1.0 958,611 - Psyr_0846 0.25 -0.0 958,611 - Psyr_0846 0.25 -0.2 958,691 + Psyr_0846 0.30 +0.4 958,691 + Psyr_0846 0.30 -1.8 958,691 + Psyr_0846 0.30 +2.1 958,692 - Psyr_0846 0.30 -0.1 958,798 + Psyr_0846 0.36 -1.5 958,961 + Psyr_0846 0.46 -0.3 958,961 + Psyr_0846 0.46 -1.5 958,961 + Psyr_0846 0.46 +0.6 958,961 + Psyr_0846 0.46 +0.8 958,962 - Psyr_0846 0.46 +0.8 958,962 - Psyr_0846 0.46 -0.3 958,962 - Psyr_0846 0.46 +0.8 958,969 + Psyr_0846 0.46 -0.1 959,267 + Psyr_0846 0.63 -0.9 959,345 + Psyr_0846 0.68 -0.1 959,345 + Psyr_0846 0.68 -1.5 959,345 + Psyr_0846 0.68 +0.2 959,345 + Psyr_0846 0.68 -0.5 959,345 + Psyr_0846 0.68 -2.6 959,345 + Psyr_0846 0.68 +0.1 959,345 + Psyr_0846 0.68 +0.5 959,345 + Psyr_0846 0.68 -2.3 959,345 + Psyr_0846 0.68 +0.1 959,346 - Psyr_0846 0.68 -0.6 959,346 - Psyr_0846 0.68 +0.4 959,346 - Psyr_0846 0.68 +2.1 959,346 - Psyr_0846 0.68 -1.9 959,346 - Psyr_0846 0.68 -0.9 959,346 - Psyr_0846 0.68 +0.2 959,346 - Psyr_0846 0.68 -1.2 959,346 - Psyr_0846 0.68 +1.1 959,390 + Psyr_0846 0.71 -2.9 959,390 + Psyr_0846 0.71 -0.1 959,391 - Psyr_0846 0.71 -0.9 959,391 - Psyr_0846 0.71 -2.1 959,391 - Psyr_0846 0.71 -0.2 959,391 - Psyr_0846 0.71 -0.8 959,393 + Psyr_0846 0.71 -0.9 959,393 + Psyr_0846 0.71 +0.1 959,567 + Psyr_0846 0.81 -1.3 959,568 - Psyr_0846 0.81 -0.3 959,642 + Psyr_0846 0.85 -2.3 959,642 + Psyr_0846 0.85 -0.5 959,666 + Psyr_0846 0.87 -0.8 959,666 + Psyr_0846 0.87 -1.4 959,666 + Psyr_0846 0.87 -2.0 959,666 + Psyr_0846 0.87 +0.3 959,666 + Psyr_0846 0.87 +0.5 959,666 + Psyr_0846 0.87 -0.3 959,667 - Psyr_0846 0.87 -2.0 959,667 - Psyr_0846 0.87 -0.9 959,708 + Psyr_0846 0.89 +0.2 959,709 - Psyr_0846 0.89 +2.4 959,728 + +0.4 959,866 + -0.9 959,867 - -1.3 959,894 + -1.5 959,894 + -0.4 959,894 + -1.6 959,894 + +0.2 959,894 + -0.5 959,894 + -1.0 959,894 + -0.5 959,894 + +2.6 959,895 - -0.2 959,895 - +2.1 959,895 - +0.1 959,895 - +0.1 959,895 - +0.6 959,895 - +1.1 959,895 - -0.1 959,895 - -1.3 959,907 + -1.2 959,976 + Psyr_0847 0.16 +0.5 959,976 + Psyr_0847 0.16 -1.3 959,977 - Psyr_0847 0.16 -0.0 959,977 - Psyr_0847 0.16 +0.3 959,977 - Psyr_0847 0.16 -0.9 959,980 + Psyr_0847 0.16 +0.2 959,980 + Psyr_0847 0.16 -0.4 959,980 + Psyr_0847 0.16 +0.2 959,980 + Psyr_0847 0.16 -0.9 959,980 + Psyr_0847 0.16 +1.1 959,980 + Psyr_0847 0.16 -0.0 959,980 + Psyr_0847 0.16 -1.3 959,980 + Psyr_0847 0.16 +0.3 959,981 - Psyr_0847 0.17 -0.8 959,981 - Psyr_0847 0.17 -2.1 959,981 - Psyr_0847 0.17 -0.3 959,981 - Psyr_0847 0.17 -1.7 959,981 - Psyr_0847 0.17 -0.5 959,981 - Psyr_0847 0.17 -0.5 959,981 - Psyr_0847 0.17 +0.1 960,050 + Psyr_0847 0.31 +0.1 960,050 + Psyr_0847 0.31 +0.5 960,051 - Psyr_0847 0.31 -0.4 960,051 - Psyr_0847 0.31 +0.4 960,257 - Psyr_0847 0.73 -1.4 960,388 + -1.6 960,388 + +0.7 960,397 + -0.4 960,398 - -0.3 960,398 - -0.2 960,398 - -1.5 960,423 + -0.9 960,702 + Psyr_0848 0.26 -0.3 960,702 + Psyr_0848 0.26 -0.4 960,703 - Psyr_0848 0.26 -0.4 960,703 - Psyr_0848 0.26 +0.4 960,703 - Psyr_0848 0.26 +2.5 960,774 + Psyr_0848 0.33 -0.7 960,894 + Psyr_0848 0.45 -0.8
Or see this region's nucleotide sequence