Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_006170

Experiment: R2A with Tricalcium phosphate 0.5 g/L

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Tricalcium phosphate 0.5 g/L
2,518,818	+		ABIE53_006169	0.56	+0.4
2,518,818	+		ABIE53_006169	0.56	+1.9
2,518,846	-		ABIE53_006169	0.58	-1.1
2,518,846	-		ABIE53_006169	0.58	-1.4
2,518,848	+		ABIE53_006169	0.58	-0.7
2,518,849	-		ABIE53_006169	0.58	+0.9
2,518,849	-		ABIE53_006169	0.58	-1.4
2,518,875	-		ABIE53_006169	0.60	+0.9
2,518,923	-		ABIE53_006169	0.62	+0.2
2,518,950	+		ABIE53_006169	0.64	-0.4
2,518,992	+		ABIE53_006169	0.66	+0.6
2,518,993	-		ABIE53_006169	0.66	+0.2
2,519,143	-		ABIE53_006169	0.74	-0.7
2,519,143	-		ABIE53_006169	0.74	+0.9
2,519,175	+		ABIE53_006169	0.76	+1.3
2,519,550	+				+0.2
2,519,550	+				+0.9
2,519,551	-				+2.9
2,519,675	+				+0.9
2,519,675	+				-0.7
2,519,676	-				-0.1
2,519,729	+				-0.1
2,519,730	-				+0.1
2,519,902	+		ABIE53_006170	0.13	+0.9
2,519,903	-		ABIE53_006170	0.13	-3.7
2,519,990	+		ABIE53_006170	0.19	-0.1
2,519,990	+		ABIE53_006170	0.19	-0.1
2,519,990	+		ABIE53_006170	0.19	-0.6
2,519,991	-		ABIE53_006170	0.19	-1.4
2,519,991	-		ABIE53_006170	0.19	+2.5
2,519,991	-		ABIE53_006170	0.19	-0.1
2,520,159	+		ABIE53_006170	0.30	+0.7
2,520,160	-		ABIE53_006170	0.30	+1.9
2,520,160	-		ABIE53_006170	0.30	-1.4
2,520,199	+		ABIE53_006170	0.33	-2.1
2,520,199	+		ABIE53_006170	0.33	-1.8
2,520,199	+		ABIE53_006170	0.33	-2.2
2,520,199	+		ABIE53_006170	0.33	+1.5
2,520,199	+		ABIE53_006170	0.33	+0.2
2,520,200	-		ABIE53_006170	0.33	-0.4
2,520,200	-		ABIE53_006170	0.33	+0.9
2,520,200	-		ABIE53_006170	0.33	-1.8
2,520,205	+		ABIE53_006170	0.33	-0.9
2,520,482	-		ABIE53_006170	0.52	-1.3
2,520,482	-		ABIE53_006170	0.52	-0.7
2,520,614	-		ABIE53_006170	0.61	+2.5
2,520,766	+		ABIE53_006170	0.71	-0.6
2,520,767	-		ABIE53_006170	0.71	-0.1
2,520,767	-		ABIE53_006170	0.71	-0.1
2,520,839	+		ABIE53_006170	0.75	-1.3
2,520,840	-		ABIE53_006170	0.75	-2.3
2,520,952	+		ABIE53_006170	0.83	+0.9
2,520,993	+		ABIE53_006170	0.86	+0.9
2,521,015	+		ABIE53_006170	0.87	+0.9
2,521,048	+		ABIE53_006170	0.89	+0.9
2,521,245	-				+0.9
2,521,389	-		ABIE53_006171	0.15	+0.9
2,521,503	-		ABIE53_006171	0.32	-1.1
2,521,585	-		ABIE53_006171	0.43	-1.1
2,521,673	+		ABIE53_006171	0.56	+0.9
2,521,673	+		ABIE53_006171	0.56	+0.9
2,521,673	+		ABIE53_006171	0.56	-0.1
2,521,674	-		ABIE53_006171	0.56	-2.3
2,521,674	-		ABIE53_006171	0.56	-0.8
2,521,741	+		ABIE53_006171	0.66	+1.5
2,521,742	-		ABIE53_006171	0.66	-4.1
2,521,801	-		ABIE53_006171	0.75	-3.8
2,522,053	+		ABIE53_006172	0.18	+1.9
2,522,130	-		ABIE53_006172	0.38	-0.7
2,522,162	+		ABIE53_006172	0.46	-2.0
2,522,162	+		ABIE53_006172	0.46	-1.7
2,522,162	+		ABIE53_006172	0.46	-1.7