Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4554

Experiment: BHIS with Antimycin A 0.2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Antimycin A 0.2 mM
5,975,287	+				+1.1
5,975,291	-				-1.7
5,975,336	-				+1.4
5,975,360	-				-0.9
5,975,408	+				-0.6
5,975,472	-				-2.0
5,975,477	+				-0.6
5,975,501	-				-2.0
5,975,562	+				+1.0
5,975,563	-				-0.0
5,975,601	+		BT4553	0.15	-2.0
5,975,602	-		BT4553	0.15	-2.1
5,975,750	-		BT4553	0.38	-0.4
5,975,753	+		BT4553	0.38	-2.2
5,975,754	-		BT4553	0.38	-1.6
5,975,774	+		BT4553	0.41	-0.0
5,975,782	+		BT4553	0.43	-1.2
5,975,782	+		BT4553	0.43	-1.6
5,975,783	-		BT4553	0.43	-1.8
5,975,900	-		BT4553	0.60	-0.0
5,975,973	+		BT4553	0.72	-1.1
5,975,995	+		BT4553	0.75	-1.1
5,975,996	-		BT4553	0.75	-1.0
5,976,009	+		BT4553	0.77	+0.6
5,976,056	-		BT4553	0.84	-2.8
5,976,073	+		BT4553	0.87	-0.3
5,976,073	+		BT4553	0.87	+1.3
5,976,145	+				-0.0
5,976,186	+				-2.0
5,976,187	-				-3.0
5,976,222	+				-0.0
5,976,223	-				-2.8
5,976,224	+				-0.0
5,976,225	-				-2.2
5,976,233	-				-0.0
5,976,235	-				-1.6
5,976,279	-				-0.7
5,976,279	-				-0.4
5,976,342	-		BT4554	0.13	-2.2
5,976,414	-		BT4554	0.21	-2.8
5,976,522	+		BT4554	0.33	-2.0
5,976,759	-		BT4554	0.60	-2.3
5,976,769	-		BT4554	0.61	-0.0
5,976,769	-		BT4554	0.61	-2.2
5,976,769	-		BT4554	0.61	-2.3
5,976,771	+		BT4554	0.61	-0.9
5,976,771	+		BT4554	0.61	-2.8
5,976,908	+		BT4554	0.77	-2.3
5,976,908	+		BT4554	0.77	-2.0
5,976,908	+		BT4554	0.77	-3.1
5,976,908	+		BT4554	0.77	-0.6
5,976,908	+		BT4554	0.77	-1.3
5,976,909	-		BT4554	0.77	-1.1
5,976,915	-		BT4554	0.78	-3.2
5,977,020	-		BT4554	0.90	-1.9
5,977,145	+				-1.9
5,977,147	+				-2.3
5,977,149	+				-1.2
5,977,149	+				+1.0
5,977,274	-				-0.2
5,977,378	-		BT4555	0.11	-0.6
5,977,470	-		BT4555	0.20	-0.0
5,977,607	+		BT4555	0.33	-1.0
5,977,673	+		BT4555	0.40	-0.8
5,977,674	-		BT4555	0.40	-0.0
5,977,674	-		BT4555	0.40	-0.4
5,977,743	+		BT4555	0.47	+1.0
5,977,887	+		BT4555	0.61	-1.5
5,977,983	+		BT4555	0.71	-1.2
5,977,995	+		BT4555	0.72	-1.6
5,977,995	+				-1.6
5,978,103	-		BT4555	0.83	-1.6
5,978,103	-		BT4555	0.83	-0.7
5,978,104	+		BT4555	0.83	-0.6
5,978,105	-		BT4555	0.83	+1.0