Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1767

Experiment: BHIS with Antimycin A 0.2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Antimycin A 0.2 mM
2,187,449	+		BT1766	0.49	-0.6
2,187,461	-		BT1766	0.50	-1.9
2,187,488	+		BT1766	0.52	-1.6
2,187,489	-		BT1766	0.52	-2.3
2,187,530	-		BT1766	0.55	-1.6
2,187,599	-		BT1766	0.59	-1.0
2,187,634	+		BT1766	0.62	-0.6
2,187,635	-		BT1766	0.62	-2.3
2,187,662	+		BT1766	0.64	+1.8
2,187,756	+		BT1766	0.70	-1.0
2,187,756	+		BT1766	0.70	-2.3
2,187,757	+		BT1766	0.70	-1.4
2,188,140	+				-1.0
2,188,198	+				-1.4
2,188,336	-				-1.4
2,188,437	+				-0.8
2,188,437	+				-1.2
2,188,437	+				-2.3
2,188,438	-				+0.0
2,188,461	-		BT1767	0.11	+0.0
2,188,516	-		BT1767	0.17	-1.9
2,188,580	+		BT1767	0.23	-3.0
2,188,581	-		BT1767	0.23	-3.4
2,188,587	-		BT1767	0.24	-1.6
2,188,601	+		BT1767	0.25	-2.0
2,188,823	+		BT1767	0.47	-1.2
2,188,823	+		BT1767	0.47	-1.0
2,188,823	+		BT1767	0.47	-1.0
2,188,823	+		BT1767	0.47	-1.0
2,188,858	+		BT1767	0.50	-1.0
2,188,904	+		BT1767	0.55	+0.0
2,188,911	-		BT1767	0.55	-2.3
2,189,226	+		BT1767	0.86	+0.0
2,189,259	+		BT1767	0.89	-1.9
2,189,284	-				-0.4
2,189,284	-				-2.0
2,189,331	+				-1.0
2,189,392	+				-0.6
2,189,447	-				+0.1
2,189,544	-				-1.0
2,189,607	-				-0.1
2,189,658	+				+0.0
2,189,659	-				+1.6
2,189,792	+				-1.0
2,189,807	-				-0.2
2,189,846	+				+0.6
2,189,920	-		BT1768	0.12	-3.0
2,189,920	-		BT1768	0.12	-0.4
2,189,920	-		BT1768	0.12	-1.7
2,190,055	+		BT1768	0.16	-1.5
2,190,148	+		BT1768	0.19	+0.3
2,190,160	+		BT1768	0.19	-0.7
2,190,248	+		BT1768	0.22	+0.0
2,190,262	+		BT1768	0.22	+0.3
2,190,262	+		BT1768	0.22	+1.3
2,190,262	+		BT1768	0.22	+0.0
2,190,263	-		BT1768	0.22	-1.6
2,190,265	-		BT1768	0.22	-0.6
2,190,265	-		BT1768	0.22	-2.5
2,190,265	-		BT1768	0.22	-1.0
2,190,308	-		BT1768	0.23	-1.2
2,190,308	-		BT1768	0.23	+0.5
2,190,320	-		BT1768	0.24	-0.7
2,190,340	+		BT1768	0.24	-0.6
2,190,347	-		BT1768	0.25	-1.4
2,190,347	-		BT1768	0.25	-1.6
2,190,347	-		BT1768	0.25	-1.3