Experiment: Nitrate/ lactate media with Nitrate 20mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2459 and Psest_2460 are separated by 60 nucleotides Psest_2460 and Psest_2461 are separated by 30 nucleotides
Psest_2459: Psest_2459 - ATPase, P-type (transporting), HAD superfamily, subfamily IC, at 2,628,727 to 2,631,417
_2459
Psest_2460: Psest_2460 - hypothetical protein, at 2,631,478 to 2,631,756
_2460
Psest_2461: Psest_2461 - tRNA 2-selenouridine synthase, at 2,631,787 to 2,632,893
_2461
Position (kb)
2631
2632 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2630.786 kb on - strand, within Psest_2459 at 2630.786 kb on - strand, within Psest_2459 at 2631.240 kb on - strand at 2631.240 kb on - strand at 2631.479 kb on + strand at 2631.506 kb on + strand, within Psest_2460 at 2631.603 kb on - strand, within Psest_2460 at 2631.789 kb on - strand at 2631.789 kb on - strand at 2631.822 kb on - strand at 2631.890 kb on + strand at 2631.891 kb on - strand at 2631.891 kb on - strand at 2631.891 kb on - strand at 2631.891 kb on - strand at 2631.891 kb on - strand at 2631.891 kb on - strand at 2631.891 kb on - strand at 2631.891 kb on - strand at 2631.891 kb on - strand at 2631.891 kb on - strand at 2631.891 kb on - strand at 2631.891 kb on - strand at 2631.891 kb on - strand at 2631.902 kb on + strand, within Psest_2461 at 2631.989 kb on - strand, within Psest_2461 at 2632.128 kb on - strand, within Psest_2461 at 2632.408 kb on + strand, within Psest_2461 at 2632.409 kb on - strand, within Psest_2461 at 2632.524 kb on - strand, within Psest_2461 at 2632.613 kb on + strand, within Psest_2461 at 2632.613 kb on + strand, within Psest_2461 at 2632.614 kb on - strand, within Psest_2461 at 2632.619 kb on + strand, within Psest_2461 at 2632.619 kb on + strand, within Psest_2461 at 2632.620 kb on - strand, within Psest_2461 at 2632.620 kb on - strand, within Psest_2461 at 2632.736 kb on + strand, within Psest_2461 at 2632.736 kb on + strand, within Psest_2461 at 2632.736 kb on + strand, within Psest_2461 at 2632.736 kb on + strand, within Psest_2461 at 2632.737 kb on - strand, within Psest_2461 at 2632.737 kb on - strand, within Psest_2461
Per-strain Table
Position Strand Gene LocusTag Fraction Nitrate/ lactate media with Nitrate 20mM remove 2,630,786 - Psest_2459 0.77 +0.6 2,630,786 - Psest_2459 0.77 -0.2 2,631,240 - +0.4 2,631,240 - -0.5 2,631,479 + +1.6 2,631,506 + Psest_2460 0.10 -3.0 2,631,603 - Psest_2460 0.45 -0.8 2,631,789 - +0.8 2,631,789 - -1.0 2,631,822 - -0.2 2,631,890 + -0.5 2,631,891 - +0.6 2,631,891 - -0.1 2,631,891 - -0.7 2,631,891 - -0.7 2,631,891 - -0.2 2,631,891 - +1.0 2,631,891 - -0.2 2,631,891 - +0.5 2,631,891 - -1.1 2,631,891 - +1.0 2,631,891 - +0.1 2,631,891 - -1.8 2,631,891 - -0.5 2,631,902 + Psest_2461 0.10 -1.3 2,631,989 - Psest_2461 0.18 -0.0 2,632,128 - Psest_2461 0.31 +0.8 2,632,408 + Psest_2461 0.56 -0.5 2,632,409 - Psest_2461 0.56 -0.3 2,632,524 - Psest_2461 0.67 +0.1 2,632,613 + Psest_2461 0.75 +0.6 2,632,613 + Psest_2461 0.75 -0.8 2,632,614 - Psest_2461 0.75 +0.5 2,632,619 + Psest_2461 0.75 +1.5 2,632,619 + Psest_2461 0.75 -1.5 2,632,620 - Psest_2461 0.75 -1.3 2,632,620 - Psest_2461 0.75 +0.8 2,632,736 + Psest_2461 0.86 -0.1 2,632,736 + Psest_2461 0.86 +1.8 2,632,736 + Psest_2461 0.86 -0.1 2,632,736 + Psest_2461 0.86 -0.5 2,632,737 - Psest_2461 0.86 -0.8 2,632,737 - Psest_2461 0.86 +0.6
Or see this region's nucleotide sequence