Experiment: Nitrate/ lactate media with Nitrate 20mM and .05mM Tungsten
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2651 and Psest_2652 are separated by 288 nucleotides Psest_2652 and Psest_2653 are separated by 131 nucleotides
Psest_2651: Psest_2651 - DNA topoisomerase I, bacterial, at 2,832,197 to 2,834,800
_2651
Psest_2652: Psest_2652 - Protein of unknown function (DUF1653)., at 2,835,089 to 2,835,322
_2652
Psest_2653: Psest_2653 - fatty oxidation complex, beta subunit FadA, at 2,835,454 to 2,836,629
_2653
Position (kb)
2835
2836 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2834.823 kb on - strand at 2835.009 kb on + strand at 2835.010 kb on - strand at 2835.010 kb on - strand at 2835.033 kb on - strand at 2835.033 kb on - strand at 2835.033 kb on - strand at 2835.033 kb on - strand at 2835.034 kb on + strand at 2835.034 kb on + strand at 2835.034 kb on + strand at 2835.034 kb on + strand at 2835.034 kb on + strand at 2835.034 kb on + strand at 2835.034 kb on + strand at 2835.034 kb on + strand at 2835.034 kb on + strand at 2835.034 kb on + strand at 2835.034 kb on + strand at 2835.034 kb on + strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.035 kb on - strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.036 kb on + strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.037 kb on - strand at 2835.038 kb on + strand at 2835.038 kb on + strand at 2835.039 kb on - strand at 2835.039 kb on - strand at 2835.039 kb on - strand at 2835.039 kb on - strand at 2835.039 kb on - strand at 2835.039 kb on - strand at 2835.211 kb on - strand, within Psest_2652 at 2835.223 kb on - strand, within Psest_2652 at 2835.223 kb on - strand, within Psest_2652 at 2835.291 kb on + strand, within Psest_2652 at 2835.291 kb on + strand, within Psest_2652 at 2835.291 kb on + strand, within Psest_2652 at 2835.291 kb on + strand, within Psest_2652 at 2835.292 kb on - strand, within Psest_2652 at 2835.292 kb on - strand, within Psest_2652 at 2835.396 kb on + strand at 2835.396 kb on + strand at 2835.397 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nitrate/ lactate media with Nitrate 20mM and .05mM Tungsten remove 2,834,823 - +1.5 2,835,009 + +0.1 2,835,010 - -1.5 2,835,010 - +0.1 2,835,033 - +1.5 2,835,033 - +0.3 2,835,033 - -2.0 2,835,033 - +0.9 2,835,034 + +1.5 2,835,034 + +0.5 2,835,034 + +1.5 2,835,034 + -0.5 2,835,034 + +0.5 2,835,034 + +0.5 2,835,034 + +1.5 2,835,034 + +0.1 2,835,034 + +1.5 2,835,034 + +1.5 2,835,034 + -0.9 2,835,034 + -1.1 2,835,035 - +0.5 2,835,035 - -0.0 2,835,035 - -0.6 2,835,035 - +0.5 2,835,035 - +1.1 2,835,035 - -0.1 2,835,035 - +1.5 2,835,035 - +0.1 2,835,035 - +0.5 2,835,035 - -1.6 2,835,035 - +1.1 2,835,035 - +0.3 2,835,035 - +0.9 2,835,035 - -0.5 2,835,035 - -0.1 2,835,035 - -0.9 2,835,035 - -0.1 2,835,035 - -0.7 2,835,035 - -0.1 2,835,035 - +0.3 2,835,035 - +0.7 2,835,035 - -0.9 2,835,035 - +0.1 2,835,035 - -2.3 2,835,035 - -1.7 2,835,035 - -1.5 2,835,035 - -2.1 2,835,035 - +1.3 2,835,035 - +0.6 2,835,036 + -0.5 2,835,036 + +0.1 2,835,036 + +1.5 2,835,036 + -1.1 2,835,036 + +1.5 2,835,036 + +2.5 2,835,036 + +1.5 2,835,036 + +2.1 2,835,036 + +1.5 2,835,036 + +1.5 2,835,036 + +0.5 2,835,036 + +1.5 2,835,036 + +2.1 2,835,036 + -1.7 2,835,036 + -0.1 2,835,036 + -0.5 2,835,036 + +1.1 2,835,036 + -0.5 2,835,036 + +2.5 2,835,036 + -0.1 2,835,036 + +0.2 2,835,037 - +0.2 2,835,037 - -0.1 2,835,037 - -0.8 2,835,037 - -0.1 2,835,037 - -0.1 2,835,037 - -0.9 2,835,037 - +0.9 2,835,037 - +0.9 2,835,037 - +0.2 2,835,037 - +0.1 2,835,037 - -0.6 2,835,037 - +0.5 2,835,037 - +0.0 2,835,037 - +0.1 2,835,037 - -0.7 2,835,037 - -0.5 2,835,037 - -0.4 2,835,037 - -0.5 2,835,037 - -0.6 2,835,037 - +0.5 2,835,037 - -1.1 2,835,037 - -0.9 2,835,037 - -0.3 2,835,037 - +0.8 2,835,038 + +0.9 2,835,038 + +1.5 2,835,039 - +0.5 2,835,039 - +0.8 2,835,039 - +1.5 2,835,039 - -0.2 2,835,039 - -0.7 2,835,039 - -0.4 2,835,211 - Psest_2652 0.52 -0.9 2,835,223 - Psest_2652 0.57 +0.5 2,835,223 - Psest_2652 0.57 -1.3 2,835,291 + Psest_2652 0.86 -1.1 2,835,291 + Psest_2652 0.86 +0.6 2,835,291 + Psest_2652 0.86 -2.6 2,835,291 + Psest_2652 0.86 -2.1 2,835,292 - Psest_2652 0.87 -0.1 2,835,292 - Psest_2652 0.87 -0.0 2,835,396 + +0.2 2,835,396 + -1.3 2,835,397 - -0.9
Or see this region's nucleotide sequence