Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2294

Experiment: Nitrite/ lactate media with Nitrite 20mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrite/ lactate media with Nitrite 20mM
2,444,240	+		Psest_2292	0.12	-1.3
2,444,240	+		Psest_2292	0.12	-0.5
2,444,240	+		Psest_2292	0.12	-1.2
2,444,240	+		Psest_2292	0.12	-0.4
2,444,240	+		Psest_2292	0.12	-2.0
2,444,240	+		Psest_2292	0.12	-1.1
2,444,240	+		Psest_2292	0.12	-1.4
2,444,241	-		Psest_2292	0.12	+0.5
2,444,294	+		Psest_2292	0.18	-0.2
2,444,532	+		Psest_2292	0.47	-0.0
2,444,693	+		Psest_2292	0.66	+0.4
2,444,694	-		Psest_2292	0.66	-2.9
2,444,694	-		Psest_2292	0.66	+0.0
2,444,694	-		Psest_2292	0.66	-0.4
2,444,716	-		Psest_2292	0.68	-1.2
2,444,717	+		Psest_2292	0.68	-0.6
2,444,717	+		Psest_2292	0.68	+0.5
2,444,717	+		Psest_2292	0.68	-0.2
2,444,717	+		Psest_2292	0.68	-0.2
2,444,718	-		Psest_2292	0.69	-0.4
2,444,718	-		Psest_2292	0.69	+0.4
2,444,718	-		Psest_2292	0.69	+0.2
2,444,718	-		Psest_2292	0.69	-0.0
2,444,718	-		Psest_2292	0.69	-0.5
2,444,718	-		Psest_2292	0.69	-0.6
2,444,718	-		Psest_2292	0.69	+0.1
2,444,718	-		Psest_2292	0.69	-0.2
2,444,774	+		Psest_2292	0.75	-0.7
2,444,774	+		Psest_2292	0.75	+1.0
2,444,775	-		Psest_2292	0.75	-0.7
2,444,777	+		Psest_2292	0.76	-0.8
2,444,778	-		Psest_2292	0.76	+1.1
2,444,778	-		Psest_2292	0.76	+2.6
2,444,819	+		Psest_2292	0.81	-1.1
2,444,819	+		Psest_2292	0.81	+2.0
2,444,819	+		Psest_2292	0.81	+1.0
2,444,819	+		Psest_2292	0.81	-1.5
2,444,819	+		Psest_2292	0.81	+0.0
2,444,819	+		Psest_2292	0.81	+0.9
2,444,819	+		Psest_2292	0.81	-0.7
2,444,819	+		Psest_2292	0.81	-0.7
2,444,819	+		Psest_2292	0.81	-1.0
2,444,819	+		Psest_2292	0.81	+0.5
2,444,819	+		Psest_2292	0.81	-1.8
2,444,819	+		Psest_2292	0.81	-0.9
2,444,819	+		Psest_2292	0.81	-1.0
2,444,819	+		Psest_2292	0.81	+0.4
2,444,819	+		Psest_2292	0.81	-1.1
2,444,820	-		Psest_2292	0.81	+0.6
2,444,820	-		Psest_2292	0.81	-1.0
2,444,820	-		Psest_2292	0.81	+0.1
2,444,820	-		Psest_2292	0.81	+0.5
2,444,820	-		Psest_2292	0.81	+1.0
2,444,820	-		Psest_2292	0.81	+0.0
2,444,820	-		Psest_2292	0.81	-0.7
2,444,823	+		Psest_2292	0.81	+0.0
2,444,824	-		Psest_2292	0.81	+0.5
2,444,824	-		Psest_2292	0.81	+0.0
2,444,824	-		Psest_2292	0.81	-0.6
2,444,824	-		Psest_2292	0.81	-1.5
2,444,824	-		Psest_2292	0.81	-0.7
2,444,824	-		Psest_2292	0.81	+1.6
2,444,824	-		Psest_2292	0.81	-0.4
2,444,824	-		Psest_2292	0.81	-1.2
2,445,038	+		Psest_2293	0.37	-1.9
2,445,288	+				+1.6
2,445,288	+				+3.2
2,445,288	+				-0.4
2,445,288	+				+0.0
2,445,288	+				+0.5
2,445,289	-				-0.2
2,445,289	-				+1.6
2,445,289	-				+0.1
2,445,289	-				-0.5
2,445,289	-				+0.3
2,445,289	-				+0.2
2,445,289	-				-0.4
2,445,289	-				-1.1
2,445,289	-				-1.2
2,445,289	-				-0.7
2,445,289	-				-1.3
2,445,289	-				-1.3
2,445,502	+		Psest_2294	0.25	-0.2
2,445,503	-		Psest_2294	0.25	-0.8
2,445,508	+		Psest_2294	0.25	-1.4
2,445,526	+		Psest_2294	0.26	+0.0
2,445,542	+		Psest_2294	0.28	-1.0
2,445,542	+		Psest_2294	0.28	-0.0
2,445,542	+		Psest_2294	0.28	-2.7
2,445,542	+		Psest_2294	0.28	-0.4
2,445,542	+		Psest_2294	0.28	+0.6
2,445,542	+		Psest_2294	0.28	-1.0
2,445,542	+		Psest_2294	0.28	-1.5
2,445,542	+		Psest_2294	0.28	+0.3
2,445,542	+		Psest_2294	0.28	+0.2
2,445,543	-		Psest_2294	0.28	-1.8
2,445,543	-		Psest_2294	0.28	-0.8
2,445,543	-		Psest_2294	0.28	+1.2
2,445,621	+		Psest_2294	0.33	+1.3
2,445,642	+		Psest_2294	0.35	+1.6
2,445,642	+		Psest_2294	0.35	+1.0
2,445,643	-		Psest_2294	0.35	-0.5
2,445,643	-		Psest_2294	0.35	-1.0
2,445,643	-		Psest_2294	0.35	+1.0
2,445,699	+		Psest_2294	0.39	-0.5
2,445,699	+		Psest_2294	0.39	-0.7
2,445,699	+		Psest_2294	0.39	+1.9
2,445,699	+		Psest_2294	0.39	+0.1
2,445,699	+		Psest_2294	0.39	-1.2
2,445,699	+		Psest_2294	0.39	+0.3
2,445,700	-		Psest_2294	0.39	-1.0
2,445,700	-		Psest_2294	0.39	+1.2
2,445,700	-		Psest_2294	0.39	+0.3
2,445,700	-		Psest_2294	0.39	+0.0
2,445,700	-		Psest_2294	0.39	+1.0
2,445,700	-		Psest_2294	0.39	+1.6
2,445,700	-		Psest_2294	0.39	-0.7
2,445,700	-		Psest_2294	0.39	+1.6
2,445,700	-		Psest_2294	0.39	+0.4
2,445,700	-		Psest_2294	0.39	+0.3
2,445,700	-		Psest_2294	0.39	+0.2
2,445,700	-		Psest_2294	0.39	+0.6
2,445,747	+		Psest_2294	0.42	+0.0
2,445,748	-		Psest_2294	0.43	+0.6
2,445,753	+		Psest_2294	0.43	-0.6
2,445,753	+		Psest_2294	0.43	+1.6
2,445,753	+		Psest_2294	0.43	+0.8
2,445,753	+		Psest_2294	0.43	-0.4
2,445,753	+		Psest_2294	0.43	-2.2
2,445,753	+		Psest_2294	0.43	+0.2
2,445,753	+		Psest_2294	0.43	-0.1
2,445,753	+		Psest_2294	0.43	-0.5
2,445,753	+		Psest_2294	0.43	+0.6
2,445,753	+		Psest_2294	0.43	-0.7
2,445,753	+		Psest_2294	0.43	+1.0
2,445,753	+		Psest_2294	0.43	+3.2
2,445,754	-		Psest_2294	0.43	-1.0
2,445,754	-		Psest_2294	0.43	+0.6
2,445,754	-		Psest_2294	0.43	+0.0
2,445,754	-		Psest_2294	0.43	-1.5
2,445,754	-		Psest_2294	0.43	-0.0
2,445,754	-		Psest_2294	0.43	+0.6
2,445,754	-		Psest_2294	0.43	+0.0
2,445,754	-		Psest_2294	0.43	+0.0
2,445,754	-		Psest_2294	0.43	-2.0
2,445,754	-		Psest_2294	0.43	-1.8
2,445,755	+		Psest_2294	0.43	-0.4
2,445,755	+		Psest_2294	0.43	-0.6
2,445,756	-		Psest_2294	0.43	+0.6
2,445,950	-		Psest_2294	0.57	+0.6
2,445,972	+		Psest_2294	0.59	-1.2
2,445,972	+		Psest_2294	0.59	+0.9
2,445,973	-		Psest_2294	0.59	+0.1
2,445,973	-		Psest_2294	0.59	-1.0
2,446,179	+		Psest_2294	0.74	-0.1
2,446,179	+		Psest_2294	0.74	+0.6
2,446,180	-		Psest_2294	0.74	+1.4
2,446,322	+		Psest_2294	0.84	-0.7
2,446,322	+		Psest_2294	0.84	-0.4
2,446,322	+		Psest_2294	0.84	+1.4
2,446,323	-		Psest_2294	0.84	-0.1
2,446,323	-		Psest_2294	0.84	-0.1
2,446,323	-		Psest_2294	0.84	-1.2
2,446,323	-		Psest_2294	0.84	-0.3
2,446,359	-		Psest_2294	0.87	-0.4
2,446,359	-		Psest_2294	0.87	+0.6
2,446,392	+		Psest_2294	0.89	+1.0
2,446,392	+		Psest_2294	0.89	+0.6
2,446,393	-		Psest_2294	0.89	+0.3
2,446,424	+				+0.0
2,446,425	-				-0.3
2,446,425	-				+1.6
2,446,505	+				-0.3
2,446,505	+				-0.2
2,446,505	+				-0.4
2,446,526	-				+0.3
2,446,529	+				+0.5
2,446,529	+				-0.2
2,446,529	+				-0.4
2,446,529	+				-0.4
2,446,530	-				-2.5
2,446,530	-				+1.4
2,446,530	-				+0.3
2,446,530	-				+1.6
2,446,553	-				+1.2
2,446,564	+				-1.3
2,446,782	+				+1.9
2,446,808	+				-0.4
2,446,832	+				+0.0
2,446,845	-				-0.4
2,446,880	+				-0.7
2,446,881	-				-1.2
2,446,911	+				-0.1
2,446,934	+				+0.0
2,446,993	-				-0.5
2,447,017	-				+0.9
2,447,023	+				-0.7
2,447,023	+				+0.8
2,447,023	+				-0.8
2,447,024	-				+0.0
2,447,024	-				-0.6
2,447,024	-				-0.5
2,447,152	+				-1.3
2,447,152	+				+0.2
2,447,152	+				-0.4
2,447,153	-				-0.8
2,447,153	-				-0.4
2,447,153	-				-1.4
2,447,153	-				+0.2
2,447,295	+		Psest_2295	0.22	+0.3
2,447,295	+		Psest_2295	0.22	+0.6
2,447,295	+		Psest_2295	0.22	-0.2
2,447,295	+		Psest_2295	0.22	-1.8
2,447,296	-		Psest_2295	0.22	-0.1
2,447,296	-		Psest_2295	0.22	+0.6
2,447,296	-		Psest_2295	0.22	-0.8
2,447,298	-		Psest_2295	0.23	+0.0
2,447,298	-		Psest_2295	0.23	+0.1
2,447,298	-		Psest_2295	0.23	+0.5
2,447,298	-		Psest_2295	0.23	+0.3
2,447,298	-		Psest_2295	0.23	-1.2
2,447,424	+		Psest_2295	0.39	+2.6
2,447,433	+		Psest_2295	0.40	+0.6
2,447,435	+		Psest_2295	0.41	+0.2
2,447,435	+		Psest_2295	0.41	-0.6
2,447,435	+		Psest_2295	0.41	+0.6
2,447,436	-		Psest_2295	0.41	-1.2