Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3709

Experiment: Nitrite/ lactate media with Nitrite 20mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrite/ lactate media with Nitrite 20mM
3,871,397	+		Psest_3708	0.34	-0.5
3,871,397	+		Psest_3708	0.34	+1.1
3,871,397	+		Psest_3708	0.34	+0.5
3,871,398	-		Psest_3708	0.34	-0.5
3,871,398	-		Psest_3708	0.34	-1.5
3,871,398	-		Psest_3708	0.34	-0.2
3,871,398	-		Psest_3708	0.34	-1.6
3,871,448	+		Psest_3708	0.38	-1.5
3,871,448	+		Psest_3708	0.38	-0.6
3,871,448	+		Psest_3708	0.38	-0.8
3,871,448	+		Psest_3708	0.38	-0.7
3,871,448	+		Psest_3708	0.38	-0.9
3,871,448	+		Psest_3708	0.38	+0.1
3,871,448	+		Psest_3708	0.38	-1.9
3,871,449	-		Psest_3708	0.38	+0.4
3,871,449	-		Psest_3708	0.38	-0.4
3,871,449	-		Psest_3708	0.38	-2.5
3,871,449	-		Psest_3708	0.38	+0.8
3,871,449	-		Psest_3708	0.38	-0.1
3,871,449	-		Psest_3708	0.38	-2.0
3,871,449	-		Psest_3708	0.38	+0.3
3,871,511	+		Psest_3708	0.43	+0.7
3,871,511	+		Psest_3708	0.43	-1.6
3,871,511	+		Psest_3708	0.43	+1.7
3,871,511	+		Psest_3708	0.43	+0.7
3,871,511	+		Psest_3708	0.43	-0.2
3,871,511	+		Psest_3708	0.43	+0.4
3,871,511	+		Psest_3708	0.43	-1.1
3,871,511	+		Psest_3708	0.43	-0.1
3,871,512	-		Psest_3708	0.43	+0.8
3,871,512	-		Psest_3708	0.43	-2.0
3,871,728	-		Psest_3708	0.60	+1.1
3,871,733	+		Psest_3708	0.61	-1.8
3,871,733	+		Psest_3708	0.61	+0.3
3,871,733	+		Psest_3708	0.61	+1.9
3,871,733	+		Psest_3708	0.61	-0.6
3,871,733	+		Psest_3708	0.61	+1.1
3,871,733	+		Psest_3708	0.61	+1.3
3,871,733	+		Psest_3708	0.61	+0.1
3,871,733	+		Psest_3708	0.61	-0.3
3,871,733	+		Psest_3708	0.61	+0.4
3,871,733	+		Psest_3708	0.61	-0.9
3,871,734	-		Psest_3708	0.61	-0.6
3,871,734	-		Psest_3708	0.61	-0.2
3,871,734	-		Psest_3708	0.61	+0.3
3,871,734	-		Psest_3708	0.61	-0.4
3,871,734	-		Psest_3708	0.61	-1.0
3,871,734	-		Psest_3708	0.61	+1.0
3,871,734	-		Psest_3708	0.61	-1.8
3,871,734	-		Psest_3708	0.61	-1.5
3,871,734	-		Psest_3708	0.61	-2.5
3,871,806	-		Psest_3708	0.66	+1.0
3,871,806	-		Psest_3708	0.66	-1.9
3,871,806	-		Psest_3708	0.66	+0.5
3,871,806	-		Psest_3708	0.66	+0.0
3,871,820	+		Psest_3708	0.68	+0.3
3,871,820	+		Psest_3708	0.68	+2.7
3,871,820	+		Psest_3708	0.68	+0.1
3,871,820	+		Psest_3708	0.68	+0.4
3,871,820	+		Psest_3708	0.68	+0.1
3,871,820	+		Psest_3708	0.68	+0.3
3,871,820	+		Psest_3708	0.68	-0.2
3,871,820	+		Psest_3708	0.68	+0.7
3,871,821	-		Psest_3708	0.68	+0.3
3,871,908	+		Psest_3708	0.74	-0.3
3,872,051	+		Psest_3708	0.86	+0.2
3,872,052	-		Psest_3708	0.86	-0.6
3,872,052	-		Psest_3708	0.86	-0.3
3,872,063	+		Psest_3708	0.87	-0.4
3,872,063	+		Psest_3708	0.87	+0.4
3,872,063	+		Psest_3708	0.87	-0.2
3,872,066	+		Psest_3708	0.87	+0.3
3,872,066	+		Psest_3708	0.87	-1.7
3,872,066	+		Psest_3708	0.87	-0.4
3,872,066	+		Psest_3708	0.87	-0.5
3,872,066	+		Psest_3708	0.87	-1.3
3,872,066	+		Psest_3708	0.87	-0.4
3,872,067	-		Psest_3708	0.87	-0.1
3,872,067	-		Psest_3708	0.87	+2.0
3,872,067	-		Psest_3708	0.87	-0.2
3,872,157	+				-1.0
3,872,157	+				-0.6
3,873,369	-				+1.2
3,873,369	-				+0.6
3,873,429	+				+1.1
3,873,429	+				-0.6
3,873,430	-				-0.6
3,873,430	-				-0.3
3,873,430	-				+0.6
3,873,505	+				-1.0
3,873,626	+				-0.6
3,873,900	-		Psest_3710	0.29	-1.2
3,873,900	-		Psest_3710	0.29	+0.3
3,874,029	+		Psest_3710	0.38	+0.8
3,874,130	-		Psest_3710	0.45	-0.9
3,874,171	+		Psest_3710	0.48	-0.4
3,874,171	+		Psest_3710	0.48	-0.5
3,874,171	+		Psest_3710	0.48	+0.3
3,874,171	+		Psest_3710	0.48	+0.4
3,874,171	+		Psest_3710	0.48	+0.1
3,874,171	+		Psest_3710	0.48	-0.9
3,874,171	+		Psest_3710	0.48	+0.1
3,874,171	+		Psest_3710	0.48	-0.8
3,874,171	+		Psest_3710	0.48	+0.7
3,874,171	+		Psest_3710	0.48	-0.6
3,874,171	+		Psest_3710	0.48	+0.1
3,874,171	+		Psest_3710	0.48	-0.2
3,874,171	+		Psest_3710	0.48	+0.0
3,874,172	-		Psest_3710	0.48	-0.4
3,874,172	-		Psest_3710	0.48	+0.2
3,874,172	-		Psest_3710	0.48	-1.1
3,874,172	-		Psest_3710	0.48	-0.6
3,874,172	-		Psest_3710	0.48	-0.0
3,874,172	-		Psest_3710	0.48	+0.2
3,874,172	-		Psest_3710	0.48	+0.7
3,874,172	-		Psest_3710	0.48	+1.1
3,874,172	-		Psest_3710	0.48	-1.5
3,874,172	-		Psest_3710	0.48	-1.3
3,874,172	-		Psest_3710	0.48	-1.7
3,874,172	-		Psest_3710	0.48	-0.6
3,874,172	-		Psest_3710	0.48	+0.1
3,874,172	-		Psest_3710	0.48	+0.9
3,874,175	+		Psest_3710	0.48	+0.4
3,874,175	+		Psest_3710	0.48	-1.1
3,874,175	+		Psest_3710	0.48	-0.5
3,874,175	+		Psest_3710	0.48	+0.1
3,874,175	+		Psest_3710	0.48	-1.1
3,874,175	+		Psest_3710	0.48	+1.0
3,874,176	-		Psest_3710	0.48	-0.4
3,874,176	-		Psest_3710	0.48	-0.3
3,874,176	-		Psest_3710	0.48	+0.2
3,874,176	-		Psest_3710	0.48	-0.5
3,874,177	+		Psest_3710	0.48	-1.2
3,874,177	+		Psest_3710	0.48	-0.0
3,874,177	+		Psest_3710	0.48	-0.8
3,874,177	+		Psest_3710	0.48	-0.1
3,874,177	+		Psest_3710	0.48	+1.7
3,874,177	+		Psest_3710	0.48	-0.6
3,874,177	+		Psest_3710	0.48	+0.1
3,874,177	+		Psest_3710	0.48	-1.1
3,874,177	+		Psest_3710	0.48	-0.0
3,874,177	+		Psest_3710	0.48	+1.3
3,874,177	+		Psest_3710	0.48	-0.6
3,874,177	+		Psest_3710	0.48	+0.7
3,874,177	+		Psest_3710	0.48	-0.2
3,874,177	+		Psest_3710	0.48	+0.2
3,874,177	+		Psest_3710	0.48	+1.7
3,874,177	+		Psest_3710	0.48	+0.7
3,874,177	+		Psest_3710	0.48	+0.7
3,874,177	+		Psest_3710	0.48	-0.5
3,874,177	+		Psest_3710	0.48	-0.5
3,874,178	-		Psest_3710	0.48	-1.6
3,874,178	-		Psest_3710	0.48	-0.5
3,874,178	-		Psest_3710	0.48	+3.7
3,874,178	-		Psest_3710	0.48	-0.6
3,874,178	-		Psest_3710	0.48	+1.1
3,874,178	-		Psest_3710	0.48	+0.7
3,874,178	-		Psest_3710	0.48	-1.3
3,874,178	-		Psest_3710	0.48	-1.0
3,874,178	-		Psest_3710	0.48	+0.5
3,874,178	-		Psest_3710	0.48	-0.5
3,874,178	-		Psest_3710	0.48	+1.5
3,874,178	-		Psest_3710	0.48	-0.5
3,874,178	-		Psest_3710	0.48	+0.5
3,874,178	-		Psest_3710	0.48	-0.3
3,874,308	+		Psest_3710	0.58	+0.1
3,874,308	+		Psest_3710	0.58	+0.5
3,874,308	+		Psest_3710	0.58	-0.9
3,874,309	-		Psest_3710	0.58	-1.2
3,874,309	-		Psest_3710	0.58	+0.7