Experiment: Nitrate/ lactate media with Nitrate 20mM and .05mM Tungsten
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2746 and Psest_2747 are separated by 254 nucleotides Psest_2747 and Psest_2748 are separated by 69 nucleotides Psest_2748 and Psest_2749 overlap by 4 nucleotides
Psest_2746: Psest_2746 - Protein of unknown function (DUF2855)., at 2,936,966 to 2,938,069
_2746
Psest_2747: Psest_2747 - Putative NADPH-quinone reductase (modulator of drug activity B), at 2,938,324 to 2,939,106
_2747
Psest_2748: Psest_2748 - Transcriptional regulator, at 2,939,176 to 2,940,081
_2748
Psest_2749: Psest_2749 - Predicted transcriptional regulators, at 2,940,078 to 2,940,461
_2749
Position (kb)
2938
2939
2940 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2937.356 kb on + strand, within Psest_2746 at 2937.356 kb on + strand, within Psest_2746 at 2937.357 kb on - strand, within Psest_2746 at 2937.366 kb on - strand, within Psest_2746 at 2937.586 kb on + strand, within Psest_2746 at 2937.587 kb on - strand, within Psest_2746 at 2937.587 kb on - strand, within Psest_2746 at 2937.613 kb on - strand, within Psest_2746 at 2937.613 kb on - strand, within Psest_2746 at 2937.689 kb on + strand, within Psest_2746 at 2937.717 kb on + strand, within Psest_2746 at 2937.717 kb on + strand, within Psest_2746 at 2937.718 kb on - strand, within Psest_2746 at 2937.795 kb on - strand, within Psest_2746 at 2937.839 kb on + strand, within Psest_2746 at 2937.839 kb on + strand, within Psest_2746 at 2937.928 kb on + strand, within Psest_2746 at 2937.939 kb on + strand, within Psest_2746 at 2938.020 kb on + strand at 2938.020 kb on + strand at 2938.020 kb on + strand at 2938.030 kb on + strand at 2938.030 kb on + strand at 2938.092 kb on + strand at 2938.111 kb on - strand at 2938.139 kb on - strand at 2938.336 kb on + strand at 2938.336 kb on + strand at 2938.336 kb on + strand at 2938.336 kb on + strand at 2938.336 kb on + strand at 2938.337 kb on - strand at 2938.337 kb on - strand at 2938.337 kb on - strand at 2938.337 kb on - strand at 2938.337 kb on - strand at 2938.579 kb on + strand, within Psest_2747 at 2938.579 kb on + strand, within Psest_2747 at 2938.579 kb on + strand, within Psest_2747 at 2938.579 kb on + strand, within Psest_2747 at 2938.580 kb on - strand, within Psest_2747 at 2938.580 kb on - strand, within Psest_2747 at 2938.580 kb on - strand, within Psest_2747 at 2938.580 kb on - strand, within Psest_2747 at 2938.580 kb on - strand, within Psest_2747 at 2938.629 kb on - strand, within Psest_2747 at 2938.740 kb on - strand, within Psest_2747 at 2938.740 kb on - strand, within Psest_2747 at 2938.758 kb on - strand, within Psest_2747 at 2938.758 kb on - strand, within Psest_2747 at 2938.758 kb on - strand, within Psest_2747 at 2938.758 kb on - strand, within Psest_2747 at 2938.988 kb on + strand, within Psest_2747 at 2938.988 kb on + strand, within Psest_2747 at 2938.988 kb on + strand, within Psest_2747 at 2938.988 kb on + strand, within Psest_2747 at 2938.989 kb on - strand, within Psest_2747 at 2938.989 kb on - strand, within Psest_2747 at 2939.087 kb on + strand at 2939.088 kb on - strand at 2939.088 kb on - strand at 2939.159 kb on + strand at 2939.172 kb on + strand at 2939.354 kb on + strand, within Psest_2748 at 2939.704 kb on + strand, within Psest_2748 at 2940.072 kb on + strand at 2940.072 kb on + strand at 2940.072 kb on + strand at 2940.079 kb on + strand at 2940.079 kb on + strand at 2940.080 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nitrate/ lactate media with Nitrate 20mM and .05mM Tungsten remove 2,937,356 + Psest_2746 0.35 +0.2 2,937,356 + Psest_2746 0.35 +0.3 2,937,357 - Psest_2746 0.35 -0.0 2,937,366 - Psest_2746 0.36 +0.4 2,937,586 + Psest_2746 0.56 -0.9 2,937,587 - Psest_2746 0.56 -0.1 2,937,587 - Psest_2746 0.56 +0.3 2,937,613 - Psest_2746 0.59 +0.1 2,937,613 - Psest_2746 0.59 -1.0 2,937,689 + Psest_2746 0.65 -0.6 2,937,717 + Psest_2746 0.68 +0.8 2,937,717 + Psest_2746 0.68 +0.4 2,937,718 - Psest_2746 0.68 -0.3 2,937,795 - Psest_2746 0.75 +0.4 2,937,839 + Psest_2746 0.79 +0.3 2,937,839 + Psest_2746 0.79 -0.6 2,937,928 + Psest_2746 0.87 -0.1 2,937,939 + Psest_2746 0.88 -0.0 2,938,020 + -1.4 2,938,020 + -1.6 2,938,020 + +1.4 2,938,030 + -0.0 2,938,030 + -0.0 2,938,092 + +0.7 2,938,111 - -0.7 2,938,139 - +1.0 2,938,336 + +0.3 2,938,336 + -0.0 2,938,336 + +1.2 2,938,336 + -0.7 2,938,336 + -0.8 2,938,337 - +2.0 2,938,337 - +2.0 2,938,337 - -0.0 2,938,337 - +0.5 2,938,337 - +0.7 2,938,579 + Psest_2747 0.33 -0.1 2,938,579 + Psest_2747 0.33 +0.0 2,938,579 + Psest_2747 0.33 +1.0 2,938,579 + Psest_2747 0.33 -0.5 2,938,580 - Psest_2747 0.33 +2.0 2,938,580 - Psest_2747 0.33 -1.9 2,938,580 - Psest_2747 0.33 +0.1 2,938,580 - Psest_2747 0.33 +0.2 2,938,580 - Psest_2747 0.33 -0.3 2,938,629 - Psest_2747 0.39 -0.6 2,938,740 - Psest_2747 0.53 -1.3 2,938,740 - Psest_2747 0.53 -0.3 2,938,758 - Psest_2747 0.55 +0.7 2,938,758 - Psest_2747 0.55 -0.0 2,938,758 - Psest_2747 0.55 -0.6 2,938,758 - Psest_2747 0.55 -0.8 2,938,988 + Psest_2747 0.85 -0.8 2,938,988 + Psest_2747 0.85 -0.7 2,938,988 + Psest_2747 0.85 +2.0 2,938,988 + Psest_2747 0.85 +1.0 2,938,989 - Psest_2747 0.85 -1.0 2,938,989 - Psest_2747 0.85 -0.9 2,939,087 + +0.3 2,939,088 - +1.4 2,939,088 - -0.0 2,939,159 + +0.1 2,939,172 + -1.0 2,939,354 + Psest_2748 0.20 +0.3 2,939,704 + Psest_2748 0.58 +0.3 2,940,072 + -0.8 2,940,072 + -0.3 2,940,072 + +0.7 2,940,079 + +0.1 2,940,079 + +0.7 2,940,080 - +0.4
Or see this region's nucleotide sequence