Experiment: Nitrate/ lactate media with Nitrate 20mM and .05mM Tungsten
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1915 and Psest_1916 are separated by 39 nucleotides Psest_1916 and Psest_1917 are separated by 215 nucleotides
Psest_1915: Psest_1915 - chromate transporter, chromate ion transporter (CHR) family, at 2,022,193 to 2,023,413
_1915
Psest_1916: Psest_1916 - Uncharacterized protein conserved in bacteria, at 2,023,453 to 2,024,433
_1916
Psest_1917: Psest_1917 - Predicted sugar kinase, at 2,024,649 to 2,025,536
_1917
Position (kb)
2023
2024
2025 Strain fitness (log2 ratio)
-2
-1
0
1 at 2022.659 kb on - strand, within Psest_1915 at 2022.661 kb on + strand, within Psest_1915 at 2022.661 kb on + strand, within Psest_1915 at 2022.661 kb on + strand, within Psest_1915 at 2022.662 kb on - strand, within Psest_1915 at 2022.698 kb on + strand, within Psest_1915 at 2022.817 kb on + strand, within Psest_1915 at 2022.830 kb on - strand, within Psest_1915 at 2022.830 kb on - strand, within Psest_1915 at 2023.096 kb on + strand, within Psest_1915 at 2023.096 kb on + strand, within Psest_1915 at 2023.125 kb on + strand, within Psest_1915 at 2024.173 kb on + strand, within Psest_1916 at 2024.174 kb on - strand, within Psest_1916 at 2024.183 kb on + strand, within Psest_1916 at 2024.183 kb on + strand, within Psest_1916 at 2024.183 kb on + strand, within Psest_1916 at 2024.183 kb on + strand, within Psest_1916 at 2024.183 kb on + strand, within Psest_1916 at 2024.183 kb on + strand, within Psest_1916 at 2024.186 kb on + strand, within Psest_1916 at 2024.186 kb on + strand, within Psest_1916 at 2024.186 kb on + strand, within Psest_1916 at 2024.187 kb on - strand, within Psest_1916 at 2024.187 kb on - strand, within Psest_1916 at 2024.356 kb on + strand at 2024.357 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Nitrate/ lactate media with Nitrate 20mM and .05mM Tungsten remove 2,022,659 - Psest_1915 0.38 -0.4 2,022,661 + Psest_1915 0.38 -1.3 2,022,661 + Psest_1915 0.38 -0.1 2,022,661 + Psest_1915 0.38 -0.5 2,022,662 - Psest_1915 0.38 -0.2 2,022,698 + Psest_1915 0.41 +1.2 2,022,817 + Psest_1915 0.51 +1.7 2,022,830 - Psest_1915 0.52 +0.4 2,022,830 - Psest_1915 0.52 +0.7 2,023,096 + Psest_1915 0.74 -1.9 2,023,096 + Psest_1915 0.74 -0.6 2,023,125 + Psest_1915 0.76 +0.5 2,024,173 + Psest_1916 0.73 -0.4 2,024,174 - Psest_1916 0.73 -1.6 2,024,183 + Psest_1916 0.74 -0.4 2,024,183 + Psest_1916 0.74 +0.7 2,024,183 + Psest_1916 0.74 -1.7 2,024,183 + Psest_1916 0.74 -0.1 2,024,183 + Psest_1916 0.74 +0.7 2,024,183 + Psest_1916 0.74 -2.1 2,024,186 + Psest_1916 0.75 -2.4 2,024,186 + Psest_1916 0.75 -1.3 2,024,186 + Psest_1916 0.75 -1.2 2,024,187 - Psest_1916 0.75 -0.9 2,024,187 - Psest_1916 0.75 +0.1 2,024,356 + -0.1 2,024,357 - +1.1
Or see this region's nucleotide sequence