Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3793

Experiment: Nitrite/ lactate media with Nitrite 20mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrite/ lactate media with Nitrite 20mM
3,960,675	-		Psest_3791	0.16	+0.5
3,960,675	-		Psest_3791	0.16	-1.3
3,960,677	+		Psest_3791	0.17	+0.2
3,960,677	+		Psest_3791	0.17	+0.3
3,960,677	+		Psest_3791	0.17	-0.7
3,960,677	+		Psest_3791	0.17	-0.8
3,960,677	+		Psest_3791	0.17	-0.5
3,960,677	+		Psest_3791	0.17	-0.4
3,960,677	+		Psest_3791	0.17	-1.2
3,960,701	+		Psest_3791	0.21	-0.5
3,960,701	+		Psest_3791	0.21	+0.2
3,960,701	+		Psest_3791	0.21	+1.9
3,960,701	+		Psest_3791	0.21	-0.2
3,960,701	+		Psest_3791	0.21	-0.1
3,960,701	+		Psest_3791	0.21	+0.6
3,960,701	+		Psest_3791	0.21	+1.4
3,960,701	+		Psest_3791	0.21	+0.0
3,960,701	+		Psest_3791	0.21	+0.4
3,960,701	+		Psest_3791	0.21	-0.3
3,960,701	+		Psest_3791	0.21	+1.5
3,960,701	+		Psest_3791	0.21	-0.6
3,960,701	+		Psest_3791	0.21	+0.4
3,960,701	+		Psest_3791	0.21	-1.1
3,960,701	+		Psest_3791	0.21	+0.2
3,960,701	+		Psest_3791	0.21	+1.9
3,960,701	+		Psest_3791	0.21	+0.9
3,960,701	+		Psest_3791	0.21	+0.6
3,960,701	+		Psest_3791	0.21	-0.6
3,960,701	+		Psest_3791	0.21	-0.1
3,960,701	+		Psest_3791	0.21	+0.7
3,960,701	+		Psest_3791	0.21	-1.2
3,960,701	+		Psest_3791	0.21	+0.1
3,960,702	-		Psest_3791	0.21	+0.9
3,960,702	-		Psest_3791	0.21	-1.2
3,960,702	-		Psest_3791	0.21	-1.2
3,960,702	-		Psest_3791	0.21	-0.1
3,960,702	-		Psest_3791	0.21	-1.1
3,960,702	-		Psest_3791	0.21	-0.3
3,960,702	-		Psest_3791	0.21	-0.5
3,960,702	-		Psest_3791	0.21	+0.7
3,960,703	+		Psest_3791	0.21	+0.1
3,960,703	+		Psest_3791	0.21	+0.7
3,960,703	+		Psest_3791	0.21	-0.7
3,960,703	+		Psest_3791	0.21	-0.3
3,960,703	+		Psest_3791	0.21	-0.4
3,960,703	+		Psest_3791	0.21	+1.1
3,960,703	+		Psest_3791	0.21	+1.4
3,960,703	+		Psest_3791	0.21	+0.9
3,960,703	+		Psest_3791	0.21	+1.2
3,960,703	+		Psest_3791	0.21	-0.1
3,960,703	+		Psest_3791	0.21	+0.3
3,960,703	+		Psest_3791	0.21	-1.0
3,960,703	+		Psest_3791	0.21	-1.8
3,960,703	+		Psest_3791	0.21	+0.4
3,960,704	-		Psest_3791	0.21	+0.6
3,960,704	-		Psest_3791	0.21	+0.9
3,960,704	-		Psest_3791	0.21	+0.1
3,960,704	-		Psest_3791	0.21	-1.8
3,960,704	-		Psest_3791	0.21	-0.6
3,960,704	-		Psest_3791	0.21	-0.5
3,960,704	-		Psest_3791	0.21	-0.4
3,960,704	-		Psest_3791	0.21	-0.1
3,960,704	-		Psest_3791	0.21	-0.8
3,960,704	-		Psest_3791	0.21	-0.5
3,960,704	-		Psest_3791	0.21	-1.6
3,960,704	-		Psest_3791	0.21	-0.3
3,960,704	-		Psest_3791	0.21	+0.4
3,960,704	-		Psest_3791	0.21	-0.1
3,960,704	-		Psest_3791	0.21	+1.2
3,960,704	-		Psest_3791	0.21	-0.9
3,960,704	-		Psest_3791	0.21	+0.4
3,960,704	-		Psest_3791	0.21	+0.9
3,960,807	-		Psest_3791	0.40	-0.7
3,960,908	+		Psest_3791	0.59	-0.1
3,960,908	+		Psest_3791	0.59	+0.2
3,960,908	+		Psest_3791	0.59	-0.1
3,960,908	+		Psest_3791	0.59	-0.9
3,960,908	+		Psest_3791	0.59	-0.6
3,960,908	+		Psest_3791	0.59	-1.1
3,960,908	+		Psest_3791	0.59	-0.2
3,960,908	+		Psest_3791	0.59	-0.6
3,960,909	-		Psest_3791	0.59	+0.9
3,960,909	-		Psest_3791	0.59	+0.0
3,960,909	-		Psest_3791	0.59	-2.0
3,960,909	-		Psest_3791	0.59	+0.1
3,961,183	+				+0.7
3,961,200	-				+0.8
3,961,200	-				+0.2
3,961,200	-				-2.2
3,961,323	+		Psest_3792	0.19	+1.9
3,961,323	+		Psest_3792	0.19	-0.9
3,961,324	-		Psest_3792	0.19	+0.5
3,961,324	-		Psest_3792	0.19	+0.2
3,961,324	-		Psest_3792	0.19	+0.4
3,961,324	-		Psest_3792	0.19	-1.8
3,961,631	+				+0.9
3,961,631	+				+0.5
3,961,631	+				-1.1
3,961,631	+				-0.2
3,961,631	+				-0.4
3,961,632	-				+1.4
3,961,632	-				+0.4
3,961,632	-				-0.5
3,961,632	-				-0.6
3,961,632	-				+0.4
3,961,632	-				-1.6
3,961,632	-				-0.3
3,961,632	-				-0.6
3,961,632	-				-0.1
3,961,664	+				-0.4
3,961,665	-				+0.9
3,961,665	-				+1.3
3,961,777	+		Psest_3793	0.13	-0.8
3,961,778	-		Psest_3793	0.14	-2.1
3,961,851	+		Psest_3793	0.19	-0.4
3,961,852	-		Psest_3793	0.19	-2.6
3,962,008	+		Psest_3793	0.31	-1.7
3,962,008	+		Psest_3793	0.31	-0.1
3,962,008	+		Psest_3793	0.31	-1.0
3,962,008	+		Psest_3793	0.31	-2.0
3,962,009	-		Psest_3793	0.31	+0.4
3,962,009	-		Psest_3793	0.31	-0.8
3,962,134	+		Psest_3793	0.41	+0.1
3,962,135	-		Psest_3793	0.41	-0.4
3,962,156	-		Psest_3793	0.43	+1.5
3,962,156	-		Psest_3793	0.43	+1.9
3,962,513	-		Psest_3793	0.70	-0.4
3,962,560	+		Psest_3793	0.74	-1.3
3,962,560	+		Psest_3793	0.74	-1.0
3,962,644	+		Psest_3793	0.80	+1.9
3,962,750	-		Psest_3793	0.88	-0.4
3,962,848	+				-1.1
3,962,848	+				-1.0
3,962,848	+				+0.4
3,962,848	+				-0.4
3,962,848	+				+1.5
3,962,849	-				+0.0
3,962,849	-				-1.1
3,962,849	-				-0.4
3,962,849	-				+2.9
3,962,849	-				-0.9
3,962,852	-				+1.0
3,962,852	-				-0.0
3,962,893	-				+1.2
3,962,942	-				+0.4
3,962,957	-				+0.2
3,962,988	-				+0.7
3,963,106	+		Psest_3794	0.12	-0.9
3,963,106	+		Psest_3794	0.12	-0.1
3,963,106	+		Psest_3794	0.12	-1.1
3,963,387	-		Psest_3794	0.70	-0.2
3,963,387	-		Psest_3794	0.70	+0.5
3,963,482	+		Psest_3794	0.89	-0.2
3,963,482	+		Psest_3794	0.89	-0.9
3,963,482	+		Psest_3794	0.89	+0.6
3,963,482	+		Psest_3794	0.89	-0.1
3,963,482	+		Psest_3794	0.89	-0.6
3,963,482	+		Psest_3794	0.89	-1.0
3,963,482	+		Psest_3794	0.89	-0.4
3,963,482	+		Psest_3794	0.89	+0.3
3,963,482	+		Psest_3794	0.89	-0.2
3,963,482	+		Psest_3794	0.89	-0.3
3,963,482	+		Psest_3794	0.89	-0.9
3,963,482	+		Psest_3794	0.89	-0.8
3,963,482	+		Psest_3794	0.89	+1.5
3,963,482	+		Psest_3794	0.89	+0.7
3,963,482	+		Psest_3794	0.89	+0.2
3,963,482	+		Psest_3794	0.89	+0.4
3,963,482	+		Psest_3794	0.89	+0.5
3,963,482	+		Psest_3794	0.89	-0.8
3,963,482	+		Psest_3794	0.89	-0.6
3,963,482	+		Psest_3794	0.89	-0.6
3,963,482	+		Psest_3794	0.89	+0.7
3,963,482	+		Psest_3794	0.89	-0.4
3,963,482	+		Psest_3794	0.89	+0.4
3,963,482	+		Psest_3794	0.89	-0.9
3,963,482	+		Psest_3794	0.89	+1.7
3,963,482	+		Psest_3794	0.89	+1.2
3,963,482	+		Psest_3794	0.89	-0.6
3,963,483	-		Psest_3794	0.89	-1.4
3,963,483	-		Psest_3794	0.89	-0.9
3,963,483	-		Psest_3794	0.89	-0.0
3,963,483	-		Psest_3794	0.89	+0.4
3,963,483	-		Psest_3794	0.89	-2.0
3,963,483	-		Psest_3794	0.89	-0.5
3,963,483	-		Psest_3794	0.89	-0.2
3,963,483	-		Psest_3794	0.89	-0.2
3,963,483	-		Psest_3794	0.89	+0.1
3,963,483	-		Psest_3794	0.89	-0.8
3,963,483	-		Psest_3794	0.89	-0.2
3,963,483	-		Psest_3794	0.89	+0.2
3,963,483	-		Psest_3794	0.89	-0.2
3,963,483	-		Psest_3794	0.89	+0.7
3,963,483	-		Psest_3794	0.89	-1.1
3,963,483	-		Psest_3794	0.89	-0.6
3,963,483	-		Psest_3794	0.89	+1.2
3,963,483	-		Psest_3794	0.89	-0.6
3,963,483	-		Psest_3794	0.89	-0.1
3,963,483	-		Psest_3794	0.89	-0.4
3,963,483	-		Psest_3794	0.89	-0.2
3,963,483	-		Psest_3794	0.89	-0.6
3,963,627	+				+0.7
3,963,633	-				+1.2
3,963,711	+				+0.1
3,963,712	-				+0.5
3,963,712	-				-0.6
3,963,712	-				+0.9
3,963,812	+		Psest_3795	0.13	-0.6
3,963,812	+		Psest_3795	0.13	-1.4
3,963,813	-		Psest_3795	0.13	+0.9
3,963,813	-		Psest_3795	0.13	+1.9