Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS10340

Experiment: D-Glucose (C) and 20 AA mix; 30C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) and 20 AA mix; 30C
2,277,653	+		LRK54_RS10335	0.31	-2.2
2,277,653	+		LRK54_RS10335	0.31	-0.5
2,277,653	+		LRK54_RS10335	0.31	-1.2
2,277,653	+		LRK54_RS10335	0.31	-1.5
2,277,653	+		LRK54_RS10335	0.31	-1.2
2,277,653	+		LRK54_RS10335	0.31	-1.0
2,277,653	+		LRK54_RS10335	0.31	-1.8
2,277,653	+		LRK54_RS10335	0.31	-2.9
2,277,653	+		LRK54_RS10335	0.31	-3.5
2,277,653	+		LRK54_RS10335	0.31	-1.5
2,277,654	-		LRK54_RS10335	0.31	-1.5
2,277,654	-		LRK54_RS10335	0.31	-1.9
2,277,654	-		LRK54_RS10335	0.31	-0.9
2,277,654	-		LRK54_RS10335	0.31	-3.6
2,277,654	-		LRK54_RS10335	0.31	-2.2
2,277,654	-		LRK54_RS10335	0.31	+0.1
2,277,654	-		LRK54_RS10335	0.31	+0.1
2,277,654	-		LRK54_RS10335	0.31	-1.1
2,277,654	-		LRK54_RS10335	0.31	-0.9
2,277,654	-		LRK54_RS10335	0.31	-1.5
2,277,654	-		LRK54_RS10335	0.31	-2.5
2,277,654	-		LRK54_RS10335	0.31	-0.9
2,277,736	+		LRK54_RS10335	0.37	-1.5
2,277,737	+		LRK54_RS10335	0.37	-0.6
2,277,737	+		LRK54_RS10335	0.37	+0.1
2,277,737	+		LRK54_RS10335	0.37	-0.9
2,277,737	+		LRK54_RS10335	0.37	-0.9
2,277,737	+		LRK54_RS10335	0.37	+0.4
2,277,737	+		LRK54_RS10335	0.37	+1.1
2,277,737	+		LRK54_RS10335	0.37	-2.7
2,277,737	+		LRK54_RS10335	0.37	-3.5
2,277,737	+		LRK54_RS10335	0.37	-2.2
2,277,737	+		LRK54_RS10335	0.37	-3.2
2,277,738	-		LRK54_RS10335	0.37	-2.2
2,277,738	-		LRK54_RS10335	0.37	-3.6
2,277,738	-		LRK54_RS10335	0.37	-1.5
2,277,738	-		LRK54_RS10335	0.37	-1.9
2,277,738	-		LRK54_RS10335	0.37	-0.9
2,277,738	-		LRK54_RS10335	0.37	-1.9
2,277,738	-		LRK54_RS10335	0.37	-2.1
2,277,738	-		LRK54_RS10335	0.37	-2.9
2,277,738	-		LRK54_RS10335	0.37	-2.9
2,277,738	-		LRK54_RS10335	0.37	+0.1
2,277,738	-		LRK54_RS10335	0.37	-3.4
2,277,738	-		LRK54_RS10335	0.37	+0.1
2,277,747	+		LRK54_RS10335	0.38	-2.7
2,277,747	+		LRK54_RS10335	0.38	-1.9
2,277,747	+		LRK54_RS10335	0.38	+0.1
2,277,747	+		LRK54_RS10335	0.38	-2.7
2,277,747	+		LRK54_RS10335	0.38	-2.0
2,277,747	+		LRK54_RS10335	0.38	-3.2
2,277,747	+		LRK54_RS10335	0.38	-1.2
2,277,747	+		LRK54_RS10335	0.38	-2.1
2,277,748	-		LRK54_RS10335	0.38	-2.5
2,277,748	-		LRK54_RS10335	0.38	-2.1
2,277,748	-		LRK54_RS10335	0.38	-2.7
2,277,775	+		LRK54_RS10335	0.40	+0.1
2,277,776	-		LRK54_RS10335	0.40	-4.6
2,277,776	-		LRK54_RS10335	0.40	-0.9
2,277,776	-		LRK54_RS10335	0.40	-2.2
2,277,789	-		LRK54_RS10335	0.41	-3.2
2,278,386	-		LRK54_RS10335	0.83	-2.4
2,278,541	+				-1.5
2,278,541	+				+0.1
2,278,541	+				-1.5
2,278,541	+				-1.2
2,278,541	+				-3.5
2,278,542	-				-1.9
2,278,542	-				-2.5
2,278,542	-				-0.9
2,278,542	-				-0.9
2,278,542	-				-1.5
2,278,542	-				-1.8
2,278,542	-				+0.1
2,278,891	+		LRK54_RS10340	0.27	-1.9
2,278,892	-		LRK54_RS10340	0.27	+1.7
2,278,892	-		LRK54_RS10340	0.27	-2.5
2,278,892	-		LRK54_RS10340	0.27	-2.2
2,278,892	-		LRK54_RS10340	0.27	+1.1
2,279,140	+		LRK54_RS10340	0.52	-0.5
2,279,140	+		LRK54_RS10340	0.52	-1.6
2,279,140	+		LRK54_RS10340	0.52	-0.5
2,279,140	+		LRK54_RS10340	0.52	-2.2
2,279,140	+		LRK54_RS10340	0.52	-1.7
2,279,140	+		LRK54_RS10340	0.52	-2.2
2,279,140	+		LRK54_RS10340	0.52	-2.5
2,279,140	+		LRK54_RS10340	0.52	-0.1
2,279,140	+		LRK54_RS10340	0.52	-1.7
2,279,140	+		LRK54_RS10340	0.52	-3.4
2,279,140	+		LRK54_RS10340	0.52	+0.1
2,279,140	+		LRK54_RS10340	0.52	-1.9
2,279,140	+		LRK54_RS10340	0.52	-1.4
2,279,140	+		LRK54_RS10340	0.52	-3.4
2,279,140	+		LRK54_RS10340	0.52	-2.8
2,279,140	+		LRK54_RS10340	0.52	-2.9
2,279,140	+		LRK54_RS10340	0.52	-2.6
2,279,140	+		LRK54_RS10340	0.52	-2.7
2,279,140	+		LRK54_RS10340	0.52	-0.9
2,279,140	+		LRK54_RS10340	0.52	-0.6
2,279,140	+		LRK54_RS10340	0.52	-0.7
2,279,140	+		LRK54_RS10340	0.52	-3.1
2,279,140	+		LRK54_RS10340	0.52	-0.2
2,279,140	+		LRK54_RS10340	0.52	-1.5
2,279,141	-		LRK54_RS10340	0.52	-2.9
2,279,141	-		LRK54_RS10340	0.52	+0.1
2,279,141	-		LRK54_RS10340	0.52	-1.2
2,279,141	-		LRK54_RS10340	0.52	-0.5
2,279,141	-		LRK54_RS10340	0.52	+0.1
2,279,141	-		LRK54_RS10340	0.52	-2.0
2,279,141	-		LRK54_RS10340	0.52	+0.1
2,279,141	-		LRK54_RS10340	0.52	-1.5
2,279,141	-		LRK54_RS10340	0.52	-1.2
2,279,141	-		LRK54_RS10340	0.52	-2.6
2,279,141	-		LRK54_RS10340	0.52	-3.4
2,279,141	-		LRK54_RS10340	0.52	-2.1
2,279,141	-		LRK54_RS10340	0.52	-1.5
2,279,141	-		LRK54_RS10340	0.52	-1.4
2,279,141	-		LRK54_RS10340	0.52	-2.2
2,279,141	-		LRK54_RS10340	0.52	-1.4
2,279,141	-		LRK54_RS10340	0.52	-1.9
2,279,141	-		LRK54_RS10340	0.52	+1.1
2,279,141	-		LRK54_RS10340	0.52	-1.9
2,279,141	-		LRK54_RS10340	0.52	-0.3
2,279,141	-		LRK54_RS10340	0.52	-0.9
2,279,243	-		LRK54_RS10340	0.62	-1.8
2,279,344	+		LRK54_RS10340	0.72	-2.9
2,279,344	+		LRK54_RS10340	0.72	-2.5
2,279,344	+		LRK54_RS10340	0.72	-1.9
2,279,344	+		LRK54_RS10340	0.72	-3.0
2,279,344	+		LRK54_RS10340	0.72	-0.9
2,279,344	+		LRK54_RS10340	0.72	-2.6
2,279,344	+		LRK54_RS10340	0.72	-2.1
2,279,344	+		LRK54_RS10340	0.72	-1.2
2,279,344	+		LRK54_RS10340	0.72	-2.7
2,279,344	+		LRK54_RS10340	0.72	-1.7
2,279,344	+		LRK54_RS10340	0.72	-0.7
2,279,344	+		LRK54_RS10340	0.72	-2.5
2,279,345	-		LRK54_RS10340	0.72	-2.0
2,279,345	-		LRK54_RS10340	0.72	-3.1
2,279,345	-		LRK54_RS10340	0.72	-0.9
2,279,345	-		LRK54_RS10340	0.72	-2.3
2,279,345	-		LRK54_RS10340	0.72	-0.9
2,279,345	-		LRK54_RS10340	0.72	-1.9
2,279,411	-		LRK54_RS10340	0.79	-2.2
2,279,411	-		LRK54_RS10340	0.79	-2.2
2,279,428	+		LRK54_RS10340	0.81	-1.9
2,279,429	-		LRK54_RS10340	0.81	+1.1
2,279,429	-		LRK54_RS10340	0.81	-1.1
2,279,429	-		LRK54_RS10340	0.81	-0.9
2,279,479	+		LRK54_RS10340	0.86	-1.9
2,279,479	+		LRK54_RS10340	0.86	-2.4
2,279,480	-		LRK54_RS10340	0.86	-1.4
2,279,480	-		LRK54_RS10340	0.86	-0.9
2,279,504	-		LRK54_RS10340	0.88	+0.4
2,279,504	-		LRK54_RS10340	0.88	-2.2
2,279,504	-		LRK54_RS10340	0.88	-1.5
2,279,536	+				-1.9
2,279,537	-				-0.6
2,279,537	-				-1.3
2,280,116	+		LRK54_RS10345	0.30	-1.9
2,280,116	+		LRK54_RS10345	0.30	-3.1
2,280,116	+		LRK54_RS10345	0.30	-0.5
2,280,117	-		LRK54_RS10345	0.30	-1.9
2,280,117	-		LRK54_RS10345	0.30	-1.9
2,280,294	+		LRK54_RS10345	0.41	-1.9
2,280,294	+		LRK54_RS10345	0.41	-2.2
2,280,294	+		LRK54_RS10345	0.41	-1.2
2,280,295	-		LRK54_RS10345	0.41	+0.1
2,280,295	-		LRK54_RS10345	0.41	-1.9
2,280,295	-		LRK54_RS10345	0.41	+2.1
2,280,295	-		LRK54_RS10345	0.41	-2.9
2,280,295	-		LRK54_RS10345	0.41	+0.1
2,280,427	-		LRK54_RS10345	0.49	-0.9
2,280,427	-		LRK54_RS10345	0.49	-2.6
2,280,427	-		LRK54_RS10345	0.49	-0.5