Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS07940

Experiment: D-Glucose (C); 30C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C); 30C
1,736,469	+				-0.0
1,736,469	+				+0.1
1,736,469	+				+0.6
1,736,469	+				-0.3
1,736,469	+				-1.5
1,736,469	+				-0.9
1,736,469	+				+0.7
1,736,469	+				-1.1
1,736,469	+				+0.1
1,736,469	+				-0.5
1,736,469	+				+0.4
1,736,469	+				-0.5
1,736,469	+				-0.9
1,736,469	+				+0.3
1,736,469	+				-1.0
1,736,469	+				-0.0
1,736,469	+				-1.2
1,736,469	+				+0.1
1,736,469	+				-2.0
1,736,469	+				-0.7
1,736,469	+				+1.1
1,736,469	+				+0.9
1,736,469	+				-0.4
1,736,469	+				+1.3
1,736,469	+				+0.4
1,736,469	+				+0.2
1,736,469	+				-0.1
1,736,469	+				-0.6
1,736,469	+				-1.9
1,736,469	+				-1.2
1,736,470	-				+0.1
1,736,470	-				+0.0
1,736,470	-				+0.4
1,736,470	-				-0.9
1,736,470	-				-1.6
1,736,470	-				-0.3
1,736,470	-				-0.4
1,736,470	-				-1.3
1,736,470	-				+1.1
1,736,470	-				+1.1
1,736,470	-				+0.1
1,736,470	-				+0.5
1,736,470	-				-0.2
1,736,470	-				-0.6
1,736,559	+				-1.1
1,736,611	+				+1.0
1,736,612	-				+0.8
1,736,612	-				+1.7
1,736,612	-				-0.6
1,736,612	-				-0.5
1,736,612	-				+1.3
1,736,612	-				+1.5
1,736,612	-				+0.7
1,736,621	-				-0.2
1,736,621	-				-0.3
1,736,621	-				+0.1
1,736,621	-				-0.3
1,736,693	+				+0.1
1,736,693	+				+0.1
1,736,693	+				-0.9
1,736,693	+				-0.7
1,736,693	+				+0.3
1,736,693	+				+0.7
1,736,694	-				+0.6
1,736,694	-				-0.9
1,736,694	-				-0.9
1,736,694	-				-0.0
1,736,694	-				+0.2
1,736,722	+				-0.3
1,736,722	+				-2.7
1,736,722	+				-1.2
1,736,722	+				-0.7
1,736,722	+				-0.6
1,736,722	+				-0.3
1,736,723	-				-0.5
1,736,723	-				-0.9
1,736,723	-				+0.3
1,736,723	-				-0.5
1,736,723	-				-0.1
1,736,723	-				-0.3
1,736,754	+				+1.1
1,736,754	+				-0.6
1,736,754	+				-0.6
1,736,754	+				+0.1
1,736,754	+				+0.5
1,736,754	+				-1.7
1,736,754	+				+1.3
1,736,755	-				-0.2
1,736,755	-				+0.3
1,736,755	-				-0.9
1,736,803	+				-1.2
1,736,803	+				+0.1
1,736,804	-				-0.9
1,736,804	-				+0.3
1,736,966	-		LRK54_RS07935	0.31	+1.1
1,736,966	-		LRK54_RS07935	0.31	+0.1
1,736,966	-		LRK54_RS07935	0.31	-1.6
1,736,966	-		LRK54_RS07935	0.31	-0.1
1,737,181	+		LRK54_RS07935	0.64	-1.1
1,737,181	+		LRK54_RS07935	0.64	-0.7
1,737,181	+		LRK54_RS07935	0.64	-0.2
1,737,181	+		LRK54_RS07935	0.64	-2.2
1,737,181	+		LRK54_RS07935	0.64	-0.3
1,737,182	-		LRK54_RS07935	0.64	+0.1
1,737,182	-		LRK54_RS07935	0.64	-0.5
1,737,182	-		LRK54_RS07935	0.64	-1.2
1,737,182	-		LRK54_RS07935	0.64	-1.1
1,737,182	-		LRK54_RS07935	0.64	-1.2
1,737,182	-		LRK54_RS07935	0.64	-0.8
1,737,182	-		LRK54_RS07935	0.64	+1.1
1,737,346	+		LRK54_RS07935	0.89	-1.9
1,737,346	+		LRK54_RS07935	0.89	-0.1
1,737,346	+		LRK54_RS07935	0.89	+1.7
1,737,347	-		LRK54_RS07935	0.89	+0.3
1,737,349	-		LRK54_RS07935	0.89	+0.1
1,737,418	+				+1.7
1,737,418	+				-1.1
1,737,419	-				+1.1
1,737,440	+				-0.1
1,737,440	+				+1.1
1,737,440	+				+0.1
1,737,440	+				+0.5
1,737,440	+				+1.1
1,737,440	+				-0.5
1,737,440	+				-0.3
1,737,440	+				-1.5
1,737,440	+				-0.9
1,737,440	+				-0.7
1,737,441	-				+1.4
1,737,441	-				-0.4
1,737,441	-				-0.9
1,737,441	-				+1.1
1,737,441	-				+0.1
1,737,441	-				-1.5
1,737,441	-				-0.2
1,737,441	-				-0.1
1,737,441	-				+0.1
1,737,612	+		LRK54_RS07940	0.15	+1.2
1,737,612	+		LRK54_RS07940	0.15	-0.9
1,737,613	-		LRK54_RS07940	0.15	+0.3
1,737,613	-		LRK54_RS07940	0.15	+0.7
1,737,714	+		LRK54_RS07940	0.25	+1.4
1,737,714	+		LRK54_RS07940	0.25	+0.4
1,737,714	+		LRK54_RS07940	0.25	+0.3
1,737,714	+		LRK54_RS07940	0.25	+0.1
1,737,714	+		LRK54_RS07940	0.25	+0.3
1,737,714	+		LRK54_RS07940	0.25	-1.5
1,737,714	+		LRK54_RS07940	0.25	+1.7
1,737,714	+		LRK54_RS07940	0.25	+0.3
1,737,714	+		LRK54_RS07940	0.25	+0.1
1,737,714	+		LRK54_RS07940	0.25	+0.4
1,737,714	+		LRK54_RS07940	0.25	-0.3
1,737,714	+		LRK54_RS07940	0.25	+0.9
1,737,715	-		LRK54_RS07940	0.25	+0.8
1,737,715	-		LRK54_RS07940	0.25	+1.9
1,737,715	-		LRK54_RS07940	0.25	+0.6
1,737,715	-		LRK54_RS07940	0.25	+0.5
1,737,715	-		LRK54_RS07940	0.25	+0.2
1,737,715	-		LRK54_RS07940	0.25	+1.1
1,737,715	-		LRK54_RS07940	0.25	+0.1
1,737,715	-		LRK54_RS07940	0.25	+0.8
1,737,715	-		LRK54_RS07940	0.25	-0.9
1,737,824	-		LRK54_RS07940	0.36	-0.6
1,737,824	-		LRK54_RS07940	0.36	+1.3
1,737,879	+		LRK54_RS07940	0.41	-1.8
1,737,879	+		LRK54_RS07940	0.41	-0.1
1,737,879	+		LRK54_RS07940	0.41	+0.4
1,737,879	+		LRK54_RS07940	0.41	+0.3
1,737,879	+		LRK54_RS07940	0.41	+1.1
1,737,880	-		LRK54_RS07940	0.41	+0.8
1,737,880	-		LRK54_RS07940	0.41	+0.4
1,737,880	-		LRK54_RS07940	0.41	+1.3
1,737,885	+		LRK54_RS07940	0.41	+1.2
1,737,885	+		LRK54_RS07940	0.41	-0.9
1,737,885	+		LRK54_RS07940	0.41	+1.1
1,737,885	+		LRK54_RS07940	0.41	-0.5
1,737,885	+		LRK54_RS07940	0.41	+0.7
1,737,885	+		LRK54_RS07940	0.41	-0.3
1,737,885	+		LRK54_RS07940	0.41	+0.5
1,737,885	+		LRK54_RS07940	0.41	+0.7
1,737,885	+		LRK54_RS07940	0.41	-0.9
1,737,885	+		LRK54_RS07940	0.41	+1.6
1,737,886	-		LRK54_RS07940	0.41	+0.9
1,737,886	-		LRK54_RS07940	0.41	+0.8
1,737,886	-		LRK54_RS07940	0.41	+0.4
1,737,886	-		LRK54_RS07940	0.41	-0.4
1,737,886	-		LRK54_RS07940	0.41	+0.6
1,737,886	-		LRK54_RS07940	0.41	+0.5
1,738,131	+		LRK54_RS07940	0.65	+0.7
1,738,131	+		LRK54_RS07940	0.65	+0.5
1,738,131	+		LRK54_RS07940	0.65	-3.0
1,738,131	+		LRK54_RS07940	0.65	+0.9
1,738,132	-		LRK54_RS07940	0.65	+2.3
1,738,132	-		LRK54_RS07940	0.65	+3.0
1,738,635	+		LRK54_RS07945	0.19	+1.1
1,738,745	+		LRK54_RS07945	0.34	-0.1
1,738,745	+		LRK54_RS07945	0.34	+0.7
1,738,746	-		LRK54_RS07945	0.35	+1.0
1,738,790	+		LRK54_RS07945	0.41	+1.5
1,738,790	+		LRK54_RS07945	0.41	+0.5
1,738,790	+		LRK54_RS07945	0.41	+0.8
1,738,791	-		LRK54_RS07945	0.41	+0.6
1,738,791	-		LRK54_RS07945	0.41	+2.4
1,738,791	-		LRK54_RS07945	0.41	-0.6
1,738,791	-		LRK54_RS07945	0.41	-0.2
1,738,883	+		LRK54_RS07945	0.54	+0.4
1,738,884	-		LRK54_RS07945	0.54	-0.6
1,738,884	-		LRK54_RS07945	0.54	+0.5
1,738,884	-		LRK54_RS07945	0.54	+1.4
1,738,884	-		LRK54_RS07945	0.54	+0.1
1,738,890	-		LRK54_RS07945	0.55	+0.7
1,738,890	-		LRK54_RS07945	0.55	+0.1
1,738,890	-		LRK54_RS07945	0.55	+0.2
1,738,890	-		LRK54_RS07945	0.55	+0.2
1,738,914	+		LRK54_RS07945	0.58	+0.5
1,738,914	+		LRK54_RS07945	0.58	+1.5
1,738,914	+		LRK54_RS07945	0.58	+0.7
1,738,914	+		LRK54_RS07945	0.58	-1.2
1,738,914	+		LRK54_RS07945	0.58	-1.9
1,738,914	+		LRK54_RS07945	0.58	+0.5
1,738,914	+		LRK54_RS07945	0.58	-0.2
1,738,914	+		LRK54_RS07945	0.58	-0.0
1,738,914	+		LRK54_RS07945	0.58	+0.4
1,738,915	-		LRK54_RS07945	0.59	+0.7
1,738,915	-		LRK54_RS07945	0.59	+0.6
1,738,915	-		LRK54_RS07945	0.59	-0.6
1,738,915	-		LRK54_RS07945	0.59	+0.8
1,738,915	-		LRK54_RS07945	0.59	-1.5
1,738,915	-		LRK54_RS07945	0.59	+0.9
1,738,961	+		LRK54_RS07945	0.65	+1.3
1,738,961	+		LRK54_RS07945	0.65	+0.5
1,738,961	+		LRK54_RS07945	0.65	+1.0
1,738,961	+		LRK54_RS07945	0.65	+0.5
1,738,961	+		LRK54_RS07945	0.65	-0.9
1,738,962	-		LRK54_RS07945	0.65	+1.0
1,738,962	-		LRK54_RS07945	0.65	+0.1
1,738,962	-		LRK54_RS07945	0.65	-0.2
1,738,962	-		LRK54_RS07945	0.65	+1.1
1,738,962	-		LRK54_RS07945	0.65	+0.1
1,738,962	-		LRK54_RS07945	0.65	+1.1
1,738,962	-		LRK54_RS07945	0.65	+0.4
1,739,030	+		LRK54_RS07945	0.75	+1.1
1,739,204	+				-0.8
1,739,204	+				-3.1
1,739,205	-				+0.7
1,739,218	+				+0.1
1,739,218	+				-0.5
1,739,218	+				-0.1
1,739,219	-				+0.5
1,739,254	+				-0.8
1,739,254	+				+0.6
1,739,254	+				-0.9
1,739,255	-				+0.1
1,739,255	-				+0.1
1,739,255	-				-0.9
1,739,255	-				-1.4
1,739,255	-				-0.5
1,739,255	-				-0.9
1,739,276	+				-0.6
1,739,276	+				+0.4
1,739,276	+				-0.6
1,739,276	+				+0.1
1,739,277	-				-0.1
1,739,277	-				+0.2
1,739,303	+				-1.5
1,739,303	+				-0.9
1,739,303	+				-2.1
1,739,303	+				-1.5
1,739,304	-				+0.5
1,739,304	-				-1.5
1,739,304	-				-1.9
1,739,415	+				-1.0
1,739,415	+				+0.4
1,739,415	+				-0.1
1,739,415	+				-1.9
1,739,415	+				-1.1
1,739,415	+				+0.7
1,739,416	-				-0.2
1,739,416	-				+0.4
1,739,416	-				+0.3
1,739,416	-				-0.9
1,739,416	-				-1.4
1,739,416	-				-1.9
1,739,416	-				+0.1
1,739,417	+				+0.1
1,739,417	+				+0.1
1,739,417	+				-0.5
1,739,417	+				-1.1
1,739,417	+				+0.1
1,739,418	-				-0.9
1,739,436	+				-1.9
1,739,437	-				-0.1
1,739,437	-				+1.1
1,739,439	+				+0.1
1,739,439	+				+0.2
1,739,439	+				+2.4
1,739,440	-				-1.1
1,739,440	-				+0.1
1,739,440	-				+0.1
1,739,440	-				-0.5
1,739,440	-				+0.7
1,739,440	-				+0.1
1,739,440	-				+0.1
1,739,469	+				+0.1
1,739,488	-				+0.7