Strain Fitness in Pantoea sp. MT58 around IAI47_13475

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,859,087	+				+1.9
2,859,092	+				-0.4
2,859,093	-				-0.3
2,859,093	-				-1.8
2,859,093	-				+0.2
2,859,093	-				-0.2
2,859,093	-				+1.0
2,859,093	-				+1.0
2,859,131	+				+0.0
2,859,131	+				-0.8
2,859,131	+				+1.2
2,859,131	+				+1.1
2,859,131	+				+0.1
2,859,131	+				-1.0
2,859,131	+				+0.7
2,859,131	+				-1.1
2,859,131	+				-0.6
2,859,131	+				+0.6
2,859,131	+				-1.6
2,859,132	-				-0.4
2,859,132	-				+0.9
2,859,132	-				-1.1
2,859,132	-				+0.1
2,859,132	-				+0.5
2,859,132	-				-1.1
2,859,132	-				+0.9
2,859,132	-				-0.5
2,859,132	-				-0.1
2,859,138	-				+0.7
2,859,138	-				-1.1
2,859,146	+				-1.2
2,859,153	-				+0.2
2,859,162	+				+0.1
2,859,162	+				-0.5
2,859,162	+				-0.6
2,859,162	+				-0.6
2,859,163	-				+0.4
2,859,163	-				+0.8
2,859,163	-				-0.4
2,859,163	-				-0.6
2,859,163	-				-0.5
2,859,163	-				+0.2
2,859,171	+				-1.0
2,859,203	+				+0.1
2,859,203	+				-1.2
2,859,204	-				-1.1
2,859,204	-				+0.8
2,859,206	+				-0.6
2,859,225	+				-2.3
2,859,226	-				+0.3
2,859,226	-				+1.4
2,859,228	+				+0.0
2,859,229	-				-1.3
2,859,229	-				+0.3
2,859,229	-				+0.7
2,859,229	-				+0.0
2,859,229	-				+1.1
2,859,229	-				-2.0
2,859,229	-				+1.2
2,859,276	+		IAI47_13470	0.14	+1.1
2,859,276	+		IAI47_13470	0.14	+0.9
2,859,276	+		IAI47_13470	0.14	+0.8
2,859,276	+		IAI47_13470	0.14	+0.6
2,859,276	+		IAI47_13470	0.14	-0.2
2,859,277	-		IAI47_13470	0.14	+0.0
2,859,277	-		IAI47_13470	0.14	+1.0
2,859,277	-		IAI47_13470	0.14	-0.4
2,859,321	+		IAI47_13470	0.20	+0.7
2,859,333	+		IAI47_13470	0.21	-1.3
2,859,333	+		IAI47_13470	0.21	-1.5
2,859,334	-		IAI47_13470	0.21	-1.7
2,859,340	+		IAI47_13470	0.22	-0.6
2,859,340	+		IAI47_13470	0.22	-0.8
2,859,340	+		IAI47_13470	0.22	+1.4
2,859,340	+		IAI47_13470	0.22	+1.3
2,859,340	+		IAI47_13470	0.22	-0.1
2,859,340	+		IAI47_13470	0.22	+0.7
2,859,341	-		IAI47_13470	0.22	-0.9
2,859,341	-		IAI47_13470	0.22	+2.7
2,859,341	-		IAI47_13470	0.22	-1.4
2,859,341	-		IAI47_13470	0.22	-0.5
2,859,361	+		IAI47_13470	0.25	+2.2
2,859,362	-		IAI47_13470	0.25	-1.5
2,859,363	+		IAI47_13470	0.25	+1.2
2,859,400	+		IAI47_13470	0.30	-0.3
2,859,400	+		IAI47_13470	0.30	+0.6
2,859,400	+		IAI47_13470	0.30	-0.1
2,859,400	+		IAI47_13470	0.30	+0.1
2,859,400	+		IAI47_13470	0.30	-1.8
2,859,400	+		IAI47_13470	0.30	+0.2
2,859,400	+		IAI47_13470	0.30	+0.9
2,859,400	+		IAI47_13470	0.30	-1.9
2,859,400	+		IAI47_13470	0.30	-1.1
2,859,401	-		IAI47_13470	0.30	-0.3
2,859,401	-		IAI47_13470	0.30	-1.4
2,859,401	-		IAI47_13470	0.30	+0.3
2,859,401	-		IAI47_13470	0.30	+0.9
2,859,401	-		IAI47_13470	0.30	-1.0
2,859,401	-		IAI47_13470	0.30	+0.6
2,859,401	-		IAI47_13470	0.30	-0.2
2,859,442	+		IAI47_13470	0.35	+0.4
2,859,443	-		IAI47_13470	0.35	-0.5
2,859,453	+		IAI47_13470	0.37	+0.1
2,859,454	-		IAI47_13470	0.37	-1.1
2,859,454	-		IAI47_13470	0.37	-1.8
2,859,484	+		IAI47_13470	0.40	-1.9
2,859,484	+		IAI47_13470	0.40	+0.1
2,859,484	+		IAI47_13470	0.40	-2.0
2,859,484	+		IAI47_13470	0.40	+0.3
2,859,484	+		IAI47_13470	0.40	+1.1
2,859,484	+		IAI47_13470	0.40	+0.8
2,859,485	-		IAI47_13470	0.41	-1.0
2,859,489	+		IAI47_13470	0.41	-2.0
2,859,490	-		IAI47_13470	0.41	-0.4
2,859,490	-		IAI47_13470	0.41	+0.2
2,859,490	-		IAI47_13470	0.41	+1.2
2,859,490	-		IAI47_13470	0.41	+1.8
2,859,507	+		IAI47_13470	0.43	+0.5
2,859,508	-		IAI47_13470	0.44	-2.6
2,859,553	+		IAI47_13470	0.49	+0.3
2,859,553	+		IAI47_13470	0.49	+2.1
2,859,553	+		IAI47_13470	0.49	+2.2
2,859,553	+		IAI47_13470	0.49	+0.1
2,859,553	+		IAI47_13470	0.49	+0.7
2,859,553	+		IAI47_13470	0.49	+2.0
2,859,553	+		IAI47_13470	0.49	+1.1
2,859,553	+		IAI47_13470	0.49	-1.3
2,859,553	+		IAI47_13470	0.49	-1.0
2,859,553	+		IAI47_13470	0.49	+1.7
2,859,553	+		IAI47_13470	0.49	-0.6
2,859,554	-		IAI47_13470	0.49	+0.7
2,859,554	-		IAI47_13470	0.49	-0.4
2,859,637	+		IAI47_13470	0.60	-0.4
2,859,637	+		IAI47_13470	0.60	-0.5
2,859,637	+		IAI47_13470	0.60	-0.6
2,859,638	-		IAI47_13470	0.60	-3.3
2,859,675	+		IAI47_13470	0.65	-0.7
2,859,717	+		IAI47_13470	0.70	-1.4
2,859,717	+		IAI47_13470	0.70	-1.2
2,859,717	+		IAI47_13470	0.70	+0.4
2,859,717	+		IAI47_13470	0.70	-2.5
2,859,718	-		IAI47_13470	0.70	+0.0
2,859,783	+		IAI47_13470	0.78	-0.7
2,859,783	+		IAI47_13470	0.78	-1.5
2,859,784	-		IAI47_13470	0.79	-1.1
2,859,784	-		IAI47_13470	0.79	+1.8
2,859,816	-		IAI47_13470	0.83	-0.4
2,859,816	-		IAI47_13470	0.83	-1.0
2,859,816	-		IAI47_13470	0.83	+0.6
2,859,865	-		IAI47_13470	0.89	-0.0
2,859,865	-		IAI47_13470	0.89	+0.1
2,859,938	+				+0.6
2,859,938	+				+0.5
2,859,938	+				-1.2
2,859,939	-				+1.9
2,859,939	-				+1.8
2,859,939	-				-0.1
2,859,950	-				-0.5
2,859,961	+				-1.3
2,859,961	+				+2.4
2,859,961	+				-1.0
2,859,961	+				-0.1
2,859,961	+				-0.4
2,859,961	+				+0.2
2,859,961	+				-2.0
2,859,961	+				+1.1
2,859,962	-				-2.0
2,859,962	-				-0.6
2,859,962	-				-0.1
2,859,991	+				-0.6
2,859,991	+				+0.4
2,859,992	-				-0.3
2,859,992	-				+0.7
2,860,041	-				-1.0
2,860,051	+				-1.4
2,860,051	+				+0.1
2,860,156	+		IAI47_13475	0.23	-2.5
2,860,157	-		IAI47_13475	0.24	-1.0
2,860,163	+		IAI47_13475	0.25	-0.4
2,860,163	+		IAI47_13475	0.25	-0.6
2,860,268	+		IAI47_13475	0.48	-1.4
2,860,343	-		IAI47_13475	0.65	-0.4
2,860,370	+		IAI47_13475	0.71	-0.4
2,860,371	-		IAI47_13475	0.71	-0.6
2,860,450	+		IAI47_13475	0.88	-0.2
2,860,463	+				-0.2
2,860,653	+		IAI47_13480	0.61	-0.2
2,860,653	+		IAI47_13480	0.61	+0.5
2,860,654	-		IAI47_13480	0.61	-0.1
2,860,654	-		IAI47_13480	0.61	+0.6
2,860,743	+				-3.1
2,860,743	+				-1.5
2,860,743	+				+0.2
2,860,743	+				+0.2
2,860,743	+				+0.1
2,860,743	+				+0.4
2,860,744	-				-1.1
2,860,744	-				-2.4
2,860,744	-				+1.2
2,860,744	-				+0.1
2,860,744	-				+0.9
2,860,744	-				-1.6
2,860,819	+		IAI47_13485	0.16	-0.1
2,860,819	+		IAI47_13485	0.16	-0.5
2,860,820	-		IAI47_13485	0.16	-0.5
2,860,829	+		IAI47_13485	0.18	-2.0
2,860,829	+		IAI47_13485	0.18	+0.5
2,860,848	+		IAI47_13485	0.22	+0.2
2,860,848	+		IAI47_13485	0.22	+0.0
2,860,848	+		IAI47_13485	0.22	+0.8
2,860,848	+		IAI47_13485	0.22	-0.4
2,860,849	-		IAI47_13485	0.22	+0.4
2,860,849	-		IAI47_13485	0.22	-1.0
2,860,849	-		IAI47_13485	0.22	-0.6
2,860,849	-		IAI47_13485	0.22	+0.6
2,860,849	-		IAI47_13485	0.22	+0.1
2,860,849	-		IAI47_13485	0.22	-1.8
2,860,849	-		IAI47_13485	0.22	-1.2
2,860,930	+		IAI47_13485	0.39	-0.5
2,860,931	-		IAI47_13485	0.39	-0.9
2,860,946	-		IAI47_13485	0.42	+0.0
2,861,095	+		IAI47_13485	0.73	-0.9
2,861,095	+		IAI47_13485	0.73	+0.1
2,861,095	+		IAI47_13485	0.73	+0.0
2,861,096	-		IAI47_13485	0.73	-0.4
2,861,227	+				-0.6
2,861,227	+				+0.5
2,861,227	+				-1.2
2,861,227	+				-1.6
2,861,227	+				+1.9
2,861,227	+				-0.4
2,861,227	+				-0.2
2,861,227	+				-0.6
2,861,227	+				-1.7
2,861,227	+				+0.6
2,861,227	+				-1.1
2,861,227	+				+0.5
2,861,227	+				+0.6
2,861,227	+				+0.3
2,861,227	+				-0.8
2,861,227	+				-0.4
2,861,228	-				-0.4
2,861,228	-				+0.4
2,861,228	-				-0.5
2,861,228	-				+0.4
2,861,228	-				-1.7
2,861,228	-				-1.2
2,861,228	-				-0.8
2,861,228	-				+0.3
2,861,228	-				-1.4
2,861,228	-				-1.9
2,861,228	-				-0.4
2,861,228	-				+1.3
2,861,231	+				-1.5
2,861,231	+				-0.5
2,861,231	+				-0.8
2,861,232	-				+0.4
2,861,232	-				+0.2
2,861,232	-				+1.4
2,861,232	-				+0.3
2,861,232	-				+0.3
2,861,232	-				-1.0
2,861,232	-				-0.2
2,861,240	+				-1.9
2,861,268	+				-0.4
2,861,269	-				+2.3
2,861,304	+		IAI47_13490	0.13	-0.7
2,861,304	+		IAI47_13490	0.13	-0.6
2,861,305	-		IAI47_13490	0.13	-2.7
2,861,305	-		IAI47_13490	0.13	+1.1
2,861,323	-		IAI47_13490	0.16	-0.6
2,861,359	-		IAI47_13490	0.23	-1.6
2,861,423	+		IAI47_13490	0.36	+0.3
2,861,423	+		IAI47_13490	0.36	-0.7
2,861,423	+		IAI47_13490	0.36	-0.4
2,861,423	+		IAI47_13490	0.36	-1.1
2,861,423	+		IAI47_13490	0.36	-0.7
2,861,423	+		IAI47_13490	0.36	-2.3
2,861,423	+		IAI47_13490	0.36	-0.4
2,861,424	-		IAI47_13490	0.36	+1.4