Strain Fitness in Pantoea sp. MT58 around IAI47_11870

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,513,465	+				+2.0
2,513,465	+				+0.2
2,513,466	-				+0.3
2,513,593	+		IAI47_11865	0.15	+1.2
2,513,593	+		IAI47_11865	0.15	-0.8
2,513,593	+		IAI47_11865	0.15	-0.6
2,513,593	+		IAI47_11865	0.15	+0.4
2,513,594	-		IAI47_11865	0.15	-0.7
2,513,594	-		IAI47_11865	0.15	-0.1
2,513,613	+		IAI47_11865	0.17	-1.8
2,513,613	+		IAI47_11865	0.17	-1.5
2,513,613	+		IAI47_11865	0.17	+1.2
2,513,650	+		IAI47_11865	0.21	+0.8
2,513,651	-		IAI47_11865	0.21	-1.2
2,513,667	-		IAI47_11865	0.23	+1.3
2,513,667	-		IAI47_11865	0.23	-1.3
2,513,686	+		IAI47_11865	0.24	+1.1
2,513,701	+		IAI47_11865	0.26	+1.2
2,513,702	-		IAI47_11865	0.26	+1.5
2,513,903	+		IAI47_11865	0.46	+0.1
2,513,903	+		IAI47_11865	0.46	+1.1
2,513,903	+		IAI47_11865	0.46	+1.7
2,513,903	+		IAI47_11865	0.46	-0.5
2,513,903	+		IAI47_11865	0.46	+2.3
2,513,903	+		IAI47_11865	0.46	-0.9
2,513,903	+		IAI47_11865	0.46	+0.3
2,513,903	+		IAI47_11865	0.46	-0.1
2,513,903	+		IAI47_11865	0.46	+0.4
2,513,903	+		IAI47_11865	0.46	-2.6
2,513,904	-		IAI47_11865	0.46	+0.2
2,513,904	-		IAI47_11865	0.46	+0.4
2,513,904	-		IAI47_11865	0.46	+0.9
2,513,904	-		IAI47_11865	0.46	-2.5
2,513,907	+		IAI47_11865	0.46	-1.2
2,513,908	-		IAI47_11865	0.46	+1.8
2,513,932	+		IAI47_11865	0.49	+2.5
2,513,933	-		IAI47_11865	0.49	+0.7
2,513,933	-		IAI47_11865	0.49	-1.2
2,513,933	-		IAI47_11865	0.49	-0.7
2,514,012	+		IAI47_11865	0.57	+0.7
2,514,012	+		IAI47_11865	0.57	+0.8
2,514,012	+		IAI47_11865	0.57	+0.3
2,514,012	+		IAI47_11865	0.57	-0.9
2,514,012	+		IAI47_11865	0.57	+0.9
2,514,012	+		IAI47_11865	0.57	+1.1
2,514,013	-		IAI47_11865	0.57	-0.5
2,514,013	-		IAI47_11865	0.57	+0.6
2,514,013	-		IAI47_11865	0.57	-0.7
2,514,013	-		IAI47_11865	0.57	+0.8
2,514,013	-		IAI47_11865	0.57	-1.5
2,514,013	-		IAI47_11865	0.57	+0.2
2,514,013	-		IAI47_11865	0.57	-0.1
2,514,021	-		IAI47_11865	0.58	-1.3
2,514,021	-		IAI47_11865	0.58	+0.0
2,514,041	-		IAI47_11865	0.60	+0.7
2,514,050	+		IAI47_11865	0.60	-0.9
2,514,071	+		IAI47_11865	0.63	-0.3
2,514,071	+		IAI47_11865	0.63	-0.0
2,514,141	+		IAI47_11865	0.69	+0.7
2,514,170	+		IAI47_11865	0.72	+1.1
2,514,170	+		IAI47_11865	0.72	-1.5
2,514,171	-		IAI47_11865	0.72	+1.1
2,514,171	-		IAI47_11865	0.72	+0.9
2,514,215	-		IAI47_11865	0.77	-0.2
2,514,241	+		IAI47_11865	0.79	+0.7
2,514,261	+		IAI47_11865	0.81	+0.6
2,514,263	+		IAI47_11865	0.82	+0.5
2,514,264	-		IAI47_11865	0.82	+0.7
2,514,264	-		IAI47_11865	0.82	+0.5
2,514,264	-		IAI47_11865	0.82	-2.3
2,514,277	+		IAI47_11865	0.83	+0.7
2,514,277	+		IAI47_11865	0.83	-0.1
2,514,277	+		IAI47_11865	0.83	+1.0
2,514,277	+		IAI47_11865	0.83	-0.9
2,514,278	-		IAI47_11865	0.83	-1.7
2,514,278	-		IAI47_11865	0.83	-0.6
2,514,278	-		IAI47_11865	0.83	-0.8
2,514,278	-		IAI47_11865	0.83	+0.1
2,514,333	+		IAI47_11865	0.88	-0.9
2,514,361	+				-0.0
2,514,362	-				+1.4
2,514,377	+				+0.6
2,514,378	-				+0.6
2,514,394	+				+1.6
2,514,447	+				-1.9
2,514,466	+				-0.9
2,514,467	-				-3.4
2,514,467	-				+2.0
2,514,467	-				+2.5
2,514,467	-				+1.1
2,514,468	+				+0.6
2,514,468	+				-1.1
2,514,468	+				-1.6
2,514,468	+				+1.3
2,514,468	+				-0.4
2,514,468	+				+1.4
2,514,468	+				+0.9
2,514,468	+				+1.5
2,514,468	+				+0.8
2,514,468	+				-0.1
2,514,469	-				+1.1
2,514,469	-				+3.0
2,514,469	-				+2.5
2,514,469	-				+1.5
2,514,469	-				+1.7
2,514,469	-				+1.4
2,514,469	-				+1.1
2,514,469	-				-1.6
2,514,469	-				+1.4
2,514,469	-				+2.5
2,514,528	-		IAI47_11870	0.30	-1.7
2,514,528	-		IAI47_11870	0.30	-0.9
2,514,548	+		IAI47_11870	0.39	+2.2
2,514,555	+		IAI47_11870	0.42	-0.6
2,514,565	+		IAI47_11870	0.47	-1.8
2,514,566	-		IAI47_11870	0.47	-1.6
2,514,566	-		IAI47_11870	0.47	+0.1
2,514,646	+		IAI47_11870	0.85	+2.3
2,514,646	+		IAI47_11870	0.85	-0.6
2,514,647	-		IAI47_11870	0.85	-0.8
2,514,647	-		IAI47_11870	0.85	-0.9
2,514,665	+				+1.4
2,514,666	-				-1.1
2,514,666	-				-0.0
2,514,666	-				+1.4
2,514,666	-				+1.3
2,514,760	+				-1.6
2,514,787	+				+3.0
2,514,817	+				+0.1
2,514,818	-				+0.7
2,514,826	+				-0.0
2,514,849	-				+0.1
2,514,862	+				-0.3
2,514,862	+				-0.3
2,514,862	+				-0.6
2,514,862	+				+1.0
2,514,863	-				-0.5
2,514,863	-				+2.7
2,514,885	+				+0.0
2,514,886	-				+1.3
2,514,886	-				-0.8
2,514,890	+		IAI47_11875	0.10	-0.5
2,514,890	+		IAI47_11875	0.10	-0.1
2,514,976	+		IAI47_11875	0.45	+0.2
2,514,976	+		IAI47_11875	0.45	-0.9
2,514,977	-		IAI47_11875	0.45	+0.6
2,514,994	+		IAI47_11875	0.52	-1.0
2,514,994	+		IAI47_11875	0.52	-1.0
2,514,994	+		IAI47_11875	0.52	-1.3
2,514,994	+		IAI47_11875	0.52	-0.6
2,514,994	+		IAI47_11875	0.52	+0.7
2,514,994	+		IAI47_11875	0.52	-0.3
2,514,994	+		IAI47_11875	0.52	-1.2
2,514,994	+		IAI47_11875	0.52	-0.0
2,514,995	-		IAI47_11875	0.52	-1.3
2,514,995	-		IAI47_11875	0.52	-0.9
2,514,995	-		IAI47_11875	0.52	+0.5
2,514,995	-		IAI47_11875	0.52	-1.3
2,514,995	-		IAI47_11875	0.52	+0.6
2,514,995	-		IAI47_11875	0.52	+0.8
2,514,995	-		IAI47_11875	0.52	-0.3
2,514,995	-		IAI47_11875	0.52	-1.3
2,514,995	-		IAI47_11875	0.52	-0.6
2,514,995	-		IAI47_11875	0.52	+2.8
2,514,995	-		IAI47_11875	0.52	+0.7
2,514,995	-		IAI47_11875	0.52	+1.0
2,514,995	-		IAI47_11875	0.52	-1.5
2,515,020	+		IAI47_11875	0.62	+0.9
2,515,020	+		IAI47_11875	0.62	+0.7
2,515,021	-		IAI47_11875	0.63	+2.5
2,515,041	+		IAI47_11875	0.71	+0.9
2,515,041	+		IAI47_11875	0.71	+1.7
2,515,042	-		IAI47_11875	0.71	-0.5
2,515,042	-		IAI47_11875	0.71	+1.0
2,515,082	+		IAI47_11875	0.87	-0.1
2,515,082	+		IAI47_11875	0.87	-0.4
2,515,082	+		IAI47_11875	0.87	-0.3
2,515,112	-				-0.4
2,515,112	-				-0.8
2,515,112	-				+0.8
2,515,188	+				-0.6
2,515,188	+				+2.7
2,515,189	-				-1.2
2,515,189	-				+1.2
2,515,189	-				+0.5
2,515,189	-				-0.1
2,515,191	-				+0.5
2,515,244	+				-0.7
2,515,245	-				-2.5
2,515,245	-				+0.4
2,515,277	+				+0.6
2,515,319	+		IAI47_11880	0.24	+1.0
2,515,320	-		IAI47_11880	0.25	-0.1
2,515,409	+		IAI47_11880	0.77	+0.7
2,515,446	+				-1.2
2,515,446	+				+1.1
2,515,467	-				+0.9
2,515,493	-				+1.4
2,515,493	-				-0.8
2,515,493	-				-0.9
2,515,493	-				-1.5
2,515,493	-				+0.5
2,515,495	+				-1.1
2,515,495	+				+0.7
2,515,532	-				+1.1
2,515,559	-				-0.9
2,515,559	-				+0.4
2,515,570	-				+1.5
2,515,616	-				-1.3