Strain Fitness in Pantoea sp. MT58 around IAI47_09520

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,007,952	+		IAI47_09510	0.83	+0.4
2,007,952	+		IAI47_09510	0.83	+3.6
2,007,952	+		IAI47_09510	0.83	-1.4
2,007,952	+		IAI47_09510	0.83	-0.2
2,007,952	+		IAI47_09510	0.83	-0.9
2,007,953	-		IAI47_09510	0.83	+1.0
2,007,953	-		IAI47_09510	0.83	+0.6
2,007,953	-		IAI47_09510	0.83	-1.0
2,007,953	-		IAI47_09510	0.83	+0.8
2,007,953	-		IAI47_09510	0.83	-0.5
2,007,953	-		IAI47_09510	0.83	+0.7
2,007,953	-		IAI47_09510	0.83	-0.0
2,007,966	+		IAI47_09510	0.87	+1.7
2,007,967	-		IAI47_09510	0.88	+1.1
2,008,095	+				-1.5
2,008,211	+		IAI47_09515	0.23	+0.7
2,008,211	+		IAI47_09515	0.23	+2.1
2,008,212	-		IAI47_09515	0.23	+0.8
2,008,212	-		IAI47_09515	0.23	+0.9
2,008,212	-		IAI47_09515	0.23	+1.0
2,008,212	-		IAI47_09515	0.23	-2.9
2,008,236	+		IAI47_09515	0.27	-0.0
2,008,266	+		IAI47_09515	0.32	+1.0
2,008,266	+		IAI47_09515	0.32	+1.0
2,008,287	+		IAI47_09515	0.36	-0.0
2,008,356	-		IAI47_09515	0.47	-2.4
2,008,371	+		IAI47_09515	0.50	+1.8
2,008,371	+		IAI47_09515	0.50	-0.1
2,008,371	+		IAI47_09515	0.50	+0.1
2,008,388	+		IAI47_09515	0.53	+0.5
2,008,388	+		IAI47_09515	0.53	+1.1
2,008,388	+		IAI47_09515	0.53	+0.2
2,008,389	-		IAI47_09515	0.53	-1.0
2,008,489	-		IAI47_09515	0.69	+1.0
2,008,513	+		IAI47_09515	0.73	-1.9
2,008,514	-		IAI47_09515	0.74	-1.8
2,008,514	-		IAI47_09515	0.74	-0.6
2,008,514	-		IAI47_09515	0.74	+1.2
2,008,514	-		IAI47_09515	0.74	-0.9
2,008,558	+		IAI47_09515	0.81	-0.8
2,008,558	+		IAI47_09515	0.81	-1.4
2,008,558	+		IAI47_09515	0.81	+1.6
2,008,559	-		IAI47_09515	0.81	+0.2
2,008,559	-		IAI47_09515	0.81	+0.1
2,008,559	-		IAI47_09515	0.81	-1.1
2,008,559	-		IAI47_09515	0.81	-1.1
2,008,559	-		IAI47_09515	0.81	-1.4
2,008,559	-		IAI47_09515	0.81	-0.3
2,008,572	+		IAI47_09515	0.83	-0.3
2,008,572	+		IAI47_09515	0.83	+1.1
2,008,598	+		IAI47_09515	0.88	-0.0
2,008,598	+		IAI47_09515	0.88	+2.1
2,008,598	+		IAI47_09515	0.88	+0.3
2,008,598	+		IAI47_09515	0.88	+0.9
2,008,598	+		IAI47_09515	0.88	+1.3
2,008,599	-		IAI47_09515	0.88	-2.1
2,008,628	+				+0.6
2,008,657	+				+1.0
2,008,718	-				+0.2
2,008,724	+				+0.9
2,008,724	+				+0.6
2,008,724	+				-0.3
2,008,725	-				-0.5
2,008,725	-				-1.2
2,008,725	-				-0.4
2,008,725	-				-1.0
2,008,779	+				-0.7
2,008,779	+				-1.0
2,008,786	+				-0.6
2,008,786	+				-0.0
2,008,829	+				-0.9
2,008,829	+				-0.8
2,008,829	+				-0.0
2,008,834	+				+1.4
2,008,834	+				+0.1
2,008,835	-				+0.6
2,008,844	+				+2.6
2,008,844	+				+0.1
2,008,849	+				-0.5
2,008,889	+				+1.3
2,008,890	-				+0.2
2,008,890	-				+1.6
2,008,890	-				-2.1
2,008,890	-				+0.9
2,008,894	-				+0.8
2,008,911	-				-0.1
2,008,915	+				+0.6
2,008,915	+				-0.8
2,008,916	-				-0.9
2,008,916	-				+0.8
2,008,916	-				+1.1
2,008,926	+				-0.2
2,008,926	+				-0.4
2,008,926	+				-1.8
2,008,926	+				+0.3
2,008,926	+				-1.1
2,008,926	+				-1.4
2,008,927	-				-1.2
2,008,927	-				+1.2
2,008,941	+				-0.4
2,008,982	+				-0.3
2,008,982	+				-0.6
2,008,983	-				-1.8
2,009,139	+				+1.4
2,009,140	-				+2.4
2,009,181	+				+1.0
2,009,182	-				-0.4
2,009,182	-				-0.8
2,009,242	-				-0.3
2,009,307	+				+0.4
2,009,497	+		IAI47_09520	0.15	+1.5
2,009,497	+		IAI47_09520	0.15	-0.3
2,009,497	+		IAI47_09520	0.15	+0.6
2,009,497	+		IAI47_09520	0.15	-1.9
2,009,497	+		IAI47_09520	0.15	+1.1
2,009,686	+		IAI47_09520	0.19	-0.4
2,009,686	+		IAI47_09520	0.19	+1.2
2,009,686	+		IAI47_09520	0.19	+0.6
2,009,686	+		IAI47_09520	0.19	+2.6
2,009,814	+		IAI47_09520	0.23	-0.6
2,009,814	+		IAI47_09520	0.23	+1.8
2,009,815	-		IAI47_09520	0.23	-1.1
2,009,815	-		IAI47_09520	0.23	+3.1
2,009,815	-		IAI47_09520	0.23	-0.9
2,009,834	+		IAI47_09520	0.23	-0.6
2,009,835	-		IAI47_09520	0.23	+0.2
2,009,896	+		IAI47_09520	0.25	-1.6
2,009,897	-		IAI47_09520	0.25	-0.0
2,010,006	+		IAI47_09520	0.28	+0.8
2,010,007	-		IAI47_09520	0.28	-2.1
2,010,007	-		IAI47_09520	0.28	+0.2
2,010,010	+		IAI47_09520	0.28	-0.5
2,010,010	+		IAI47_09520	0.28	+2.0
2,010,010	+		IAI47_09520	0.28	-1.3
2,010,011	-		IAI47_09520	0.28	-0.2
2,010,011	-		IAI47_09520	0.28	+0.5
2,010,036	+		IAI47_09520	0.28	-2.0
2,010,037	-		IAI47_09520	0.28	+1.6
2,010,090	-		IAI47_09520	0.30	-0.0
2,010,114	+		IAI47_09520	0.30	+0.9
2,010,114	+		IAI47_09520	0.30	-0.6
2,010,115	-		IAI47_09520	0.30	+0.7
2,010,145	-		IAI47_09520	0.31	+0.8
2,010,145	-		IAI47_09520	0.31	+0.2
2,010,150	+		IAI47_09520	0.31	+4.1
2,010,151	-		IAI47_09520	0.31	+3.2
2,010,267	+		IAI47_09520	0.34	-1.1
2,010,310	-		IAI47_09520	0.35	+0.7
2,010,376	+		IAI47_09520	0.37	+1.3
2,010,377	-		IAI47_09520	0.37	+1.0
2,010,377	-		IAI47_09520	0.37	+0.3
2,010,486	+		IAI47_09520	0.40	-2.2
2,010,486	+		IAI47_09520	0.40	+1.3
2,010,486	+		IAI47_09520	0.40	-1.2
2,010,486	+		IAI47_09520	0.40	-0.6
2,010,486	+		IAI47_09520	0.40	+2.4
2,010,487	-		IAI47_09520	0.40	+0.6
2,010,487	-		IAI47_09520	0.40	+1.8
2,010,577	-		IAI47_09520	0.42	-0.3
2,010,598	+		IAI47_09520	0.43	-1.0
2,010,598	+		IAI47_09520	0.43	-0.4
2,010,598	+		IAI47_09520	0.43	+2.1
2,010,598	+		IAI47_09520	0.43	+0.7
2,010,616	+		IAI47_09520	0.43	+1.6
2,010,616	+		IAI47_09520	0.43	-2.0
2,010,684	+		IAI47_09520	0.45	+0.4
2,010,684	+		IAI47_09520	0.45	-0.4
2,010,684	+		IAI47_09520	0.45	+0.8
2,010,684	+		IAI47_09520	0.45	-1.6
2,010,685	-		IAI47_09520	0.45	+1.2
2,010,685	-		IAI47_09520	0.45	+0.6
2,010,685	-		IAI47_09520	0.45	+0.4
2,010,685	-		IAI47_09520	0.45	+1.3
2,010,685	-		IAI47_09520	0.45	+0.6
2,010,688	+		IAI47_09520	0.45	+0.3
2,010,688	+		IAI47_09520	0.45	+2.8
2,010,688	+		IAI47_09520	0.45	-0.6
2,010,689	-		IAI47_09520	0.45	+0.7
2,010,689	-		IAI47_09520	0.45	+1.4
2,010,689	-		IAI47_09520	0.45	+2.6
2,010,714	+		IAI47_09520	0.46	-0.7
2,010,714	+		IAI47_09520	0.46	-0.2
2,010,714	+		IAI47_09520	0.46	+0.4
2,010,714	+		IAI47_09520	0.46	+1.1
2,010,714	+		IAI47_09520	0.46	+2.2
2,010,715	-		IAI47_09520	0.46	+2.0
2,010,718	+		IAI47_09520	0.46	+0.3
2,010,718	+		IAI47_09520	0.46	-0.6
2,010,718	+		IAI47_09520	0.46	-0.2
2,010,718	+		IAI47_09520	0.46	+0.4
2,010,718	+		IAI47_09520	0.46	-1.1
2,010,718	+		IAI47_09520	0.46	+0.8
2,010,718	+		IAI47_09520	0.46	+1.0
2,010,718	+		IAI47_09520	0.46	-0.4
2,010,718	+		IAI47_09520	0.46	+1.7
2,010,718	+		IAI47_09520	0.46	+0.3
2,010,719	-		IAI47_09520	0.46	-0.8
2,010,719	-		IAI47_09520	0.46	+1.9
2,010,719	-		IAI47_09520	0.46	-0.4
2,010,719	-		IAI47_09520	0.46	-1.9
2,010,719	-		IAI47_09520	0.46	+2.1
2,010,719	-		IAI47_09520	0.46	+0.6
2,010,719	-		IAI47_09520	0.46	-1.0
2,010,719	-		IAI47_09520	0.46	-0.2
2,010,856	+		IAI47_09520	0.49	+0.6
2,010,856	+		IAI47_09520	0.49	+0.1
2,010,856	+		IAI47_09520	0.49	-1.0
2,010,856	+		IAI47_09520	0.49	+1.9
2,010,857	-		IAI47_09520	0.49	-0.7
2,010,857	-		IAI47_09520	0.49	-0.5
2,010,857	-		IAI47_09520	0.49	-0.0
2,010,857	-		IAI47_09520	0.49	+1.6
2,010,858	+		IAI47_09520	0.49	-0.0
2,010,858	+		IAI47_09520	0.49	-1.9
2,010,858	+		IAI47_09520	0.49	-2.1
2,010,859	-		IAI47_09520	0.50	+1.3
2,011,026	+		IAI47_09520	0.54	+0.5
2,011,027	-		IAI47_09520	0.54	+4.1
2,011,037	-		IAI47_09520	0.54	+0.7
2,011,099	+		IAI47_09520	0.56	+1.9
2,011,099	+		IAI47_09520	0.56	+0.9
2,011,100	-		IAI47_09520	0.56	+0.8
2,011,100	-		IAI47_09520	0.56	-1.3
2,011,100	-		IAI47_09520	0.56	-1.3
2,011,100	-		IAI47_09520	0.56	-0.8
2,011,135	+		IAI47_09520	0.57	-0.3
2,011,135	+		IAI47_09520	0.57	-0.9
2,011,136	-		IAI47_09520	0.57	-1.8
2,011,152	+		IAI47_09520	0.57	+0.2
2,011,152	+		IAI47_09520	0.57	+0.4
2,011,153	-		IAI47_09520	0.57	+0.1
2,011,230	+		IAI47_09520	0.59	-0.6
2,011,321	+		IAI47_09520	0.61	+1.6
2,011,322	-		IAI47_09520	0.61	+0.8
2,011,322	-		IAI47_09520	0.61	-0.0
2,011,425	+		IAI47_09520	0.64	+1.1
2,011,425	+		IAI47_09520	0.64	-0.1
2,011,425	+		IAI47_09520	0.64	+0.2
2,011,425	+		IAI47_09520	0.64	+1.3
2,011,425	+		IAI47_09520	0.64	+1.3
2,011,425	+		IAI47_09520	0.64	-1.1
2,011,425	+		IAI47_09520	0.64	-0.9
2,011,425	+		IAI47_09520	0.64	+1.1
2,011,425	+		IAI47_09520	0.64	-0.1
2,011,425	+		IAI47_09520	0.64	+0.1
2,011,425	+		IAI47_09520	0.64	-1.0
2,011,425	+		IAI47_09520	0.64	+0.0
2,011,425	+		IAI47_09520	0.64	+0.4
2,011,425	+		IAI47_09520	0.64	+0.8
2,011,425	+		IAI47_09520	0.64	+0.5
2,011,426	-		IAI47_09520	0.64	+1.6
2,011,426	-		IAI47_09520	0.64	-0.3
2,011,426	-		IAI47_09520	0.64	-1.1
2,011,426	-		IAI47_09520	0.64	+0.1
2,011,426	-		IAI47_09520	0.64	+0.6
2,011,426	-		IAI47_09520	0.64	+0.4
2,011,426	-		IAI47_09520	0.64	-1.1
2,011,426	-		IAI47_09520	0.64	+0.2
2,011,426	-		IAI47_09520	0.64	-0.9
2,011,426	-		IAI47_09520	0.64	+0.6
2,011,426	-		IAI47_09520	0.64	+0.3
2,011,426	-		IAI47_09520	0.64	+0.2
2,011,426	-		IAI47_09520	0.64	-1.4
2,011,426	-		IAI47_09520	0.64	+1.2
2,011,426	-		IAI47_09520	0.64	+0.6
2,011,431	+		IAI47_09520	0.64	-1.2
2,011,431	+		IAI47_09520	0.64	+0.0
2,011,431	+		IAI47_09520	0.64	+2.0
2,011,432	-		IAI47_09520	0.64	-0.1
2,011,432	-		IAI47_09520	0.64	-0.7
2,011,513	+		IAI47_09520	0.66	+2.3
2,011,513	+		IAI47_09520	0.66	+1.6
2,011,558	-		IAI47_09520	0.67	-0.4
2,011,558	-		IAI47_09520	0.67	-1.8
2,011,558	-		IAI47_09520	0.67	+0.6
2,011,558	-		IAI47_09520	0.67	-1.1
2,011,558	-		IAI47_09520	0.67	+0.3
2,011,648	-		IAI47_09520	0.70	+1.0
2,011,696	+		IAI47_09520	0.71	+2.3
2,011,696	+		IAI47_09520	0.71	+0.6
2,011,697	-		IAI47_09520	0.71	+1.0
2,011,697	-		IAI47_09520	0.71	+0.2
2,011,853	+		IAI47_09520	0.75	-1.1
2,011,884	+		IAI47_09520	0.76	-1.5
2,011,884	+		IAI47_09520	0.76	-0.2
2,011,920	+		IAI47_09520	0.77	-0.1
2,011,920	+		IAI47_09520	0.77	+0.2
2,011,920	+		IAI47_09520	0.77	-1.4
2,011,921	-		IAI47_09520	0.77	+0.8
2,012,011	+		IAI47_09520	0.79	+1.0
2,012,011	+		IAI47_09520	0.79	+0.8
2,012,011	+		IAI47_09520	0.79	+1.9
2,012,011	+		IAI47_09520	0.79	+1.6
2,012,012	-		IAI47_09520	0.79	+0.8
2,012,012	-		IAI47_09520	0.79	-0.4
2,012,032	+		IAI47_09520	0.80	-0.1
2,012,032	+		IAI47_09520	0.80	+1.6
2,012,033	-		IAI47_09520	0.80	-0.4
2,012,033	-		IAI47_09520	0.80	+0.6
2,012,033	-		IAI47_09520	0.80	+0.2
2,012,172	+		IAI47_09520	0.83	+1.9
2,012,176	+		IAI47_09520	0.83	+0.7
2,012,177	-		IAI47_09520	0.83	+0.7
2,012,177	-		IAI47_09520	0.83	-1.2
2,012,218	+		IAI47_09520	0.84	+2.0
2,012,218	+		IAI47_09520	0.84	+0.5
2,012,218	+		IAI47_09520	0.84	-0.9
2,012,219	-		IAI47_09520	0.84	-2.0
2,012,224	-		IAI47_09520	0.84	+0.6
2,012,231	-		IAI47_09520	0.85	+0.4
2,012,262	+		IAI47_09520	0.85	-1.6
2,012,262	+		IAI47_09520	0.85	+0.6
2,012,262	+		IAI47_09520	0.85	-1.3
2,012,263	-		IAI47_09520	0.85	+1.6
2,012,263	-		IAI47_09520	0.85	-1.1
2,012,280	+		IAI47_09520	0.86	+3.0
2,012,280	+		IAI47_09520	0.86	-0.9
2,012,280	+		IAI47_09520	0.86	+1.0
2,012,281	-		IAI47_09520	0.86	-0.1
2,012,288	+		IAI47_09520	0.86	+0.2
2,012,288	+		IAI47_09520	0.86	+1.0
2,012,288	+		IAI47_09520	0.86	+0.1
2,012,289	-		IAI47_09520	0.86	-2.7
2,012,427	+		IAI47_09520	0.90	-0.5
2,012,427	+		IAI47_09520	0.90	-1.3
2,012,427	+		IAI47_09520	0.90	+2.0
2,012,427	+		IAI47_09520	0.90	-1.8
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