Strain Fitness in Pantoea sp. MT58 around IAI47_08790

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,857,941	+		IAI47_08785	0.41	+1.5
1,857,941	+		IAI47_08785	0.41	+2.4
1,857,941	+		IAI47_08785	0.41	-1.9
1,857,941	+		IAI47_08785	0.41	+1.7
1,857,941	+		IAI47_08785	0.41	+0.8
1,857,941	+		IAI47_08785	0.41	+0.5
1,857,941	+		IAI47_08785	0.41	-1.4
1,857,941	+		IAI47_08785	0.41	+0.4
1,857,941	+		IAI47_08785	0.41	+0.7
1,857,941	+		IAI47_08785	0.41	-0.4
1,857,941	+		IAI47_08785	0.41	-0.5
1,857,942	-		IAI47_08785	0.41	-0.1
1,857,942	-		IAI47_08785	0.41	+2.3
1,857,942	-		IAI47_08785	0.41	-1.3
1,857,942	-		IAI47_08785	0.41	+0.6
1,857,942	-		IAI47_08785	0.41	-1.5
1,857,942	-		IAI47_08785	0.41	-0.9
1,857,942	-		IAI47_08785	0.41	-0.7
1,857,942	-		IAI47_08785	0.41	+1.3
1,857,942	-		IAI47_08785	0.41	+1.1
1,857,942	-		IAI47_08785	0.41	+1.4
1,857,945	+		IAI47_08785	0.42	-0.0
1,857,945	+		IAI47_08785	0.42	+0.9
1,857,945	+		IAI47_08785	0.42	-0.1
1,857,945	+		IAI47_08785	0.42	+0.1
1,857,945	+		IAI47_08785	0.42	+1.0
1,857,945	+		IAI47_08785	0.42	-0.7
1,857,945	+		IAI47_08785	0.42	+0.7
1,857,946	-		IAI47_08785	0.42	+1.4
1,857,946	-		IAI47_08785	0.42	-2.1
1,857,946	-		IAI47_08785	0.42	+0.6
1,857,946	-		IAI47_08785	0.42	+0.8
1,857,946	-		IAI47_08785	0.42	-1.5
1,857,946	-		IAI47_08785	0.42	-0.8
1,857,946	-		IAI47_08785	0.42	+0.2
1,857,946	-		IAI47_08785	0.42	+0.5
1,857,946	-		IAI47_08785	0.42	+0.4
1,857,946	-		IAI47_08785	0.42	-1.4
1,857,946	-		IAI47_08785	0.42	+0.7
1,857,946	-		IAI47_08785	0.42	-0.8
1,857,948	+		IAI47_08785	0.42	-1.4
1,857,949	-		IAI47_08785	0.42	-1.5
1,857,987	+		IAI47_08785	0.45	+0.9
1,857,987	+		IAI47_08785	0.45	-0.1
1,857,988	-		IAI47_08785	0.45	+1.1
1,858,118	+		IAI47_08785	0.54	+0.5
1,858,118	+		IAI47_08785	0.54	+0.6
1,858,118	+		IAI47_08785	0.54	+0.4
1,858,119	-		IAI47_08785	0.54	-0.6
1,858,124	+		IAI47_08785	0.55	+1.2
1,858,124	+		IAI47_08785	0.55	-0.1
1,858,124	+		IAI47_08785	0.55	-0.1
1,858,124	+		IAI47_08785	0.55	+0.4
1,858,124	+		IAI47_08785	0.55	-0.5
1,858,124	+		IAI47_08785	0.55	+1.9
1,858,124	+		IAI47_08785	0.55	-1.4
1,858,124	+		IAI47_08785	0.55	+1.9
1,858,124	+		IAI47_08785	0.55	+0.6
1,858,125	-		IAI47_08785	0.55	-2.5
1,858,125	-		IAI47_08785	0.55	+1.9
1,858,125	-		IAI47_08785	0.55	+0.3
1,858,125	-		IAI47_08785	0.55	-0.4
1,858,125	-		IAI47_08785	0.55	-1.5
1,858,125	-		IAI47_08785	0.55	+1.2
1,858,125	-		IAI47_08785	0.55	+0.4
1,858,125	-		IAI47_08785	0.55	+0.3
1,858,125	-		IAI47_08785	0.55	-0.7
1,858,310	+		IAI47_08785	0.68	+0.3
1,858,310	+		IAI47_08785	0.68	+2.1
1,858,311	-		IAI47_08785	0.68	+2.1
1,858,311	-		IAI47_08785	0.68	+1.5
1,858,311	-		IAI47_08785	0.68	-2.4
1,858,313	+		IAI47_08785	0.69	+0.2
1,858,313	+		IAI47_08785	0.69	+0.8
1,858,313	+		IAI47_08785	0.69	+1.3
1,858,313	+		IAI47_08785	0.69	-0.8
1,858,313	+		IAI47_08785	0.69	-0.7
1,858,313	+		IAI47_08785	0.69	+0.6
1,858,313	+		IAI47_08785	0.69	+0.8
1,858,313	+		IAI47_08785	0.69	+0.7
1,858,313	+		IAI47_08785	0.69	+0.4
1,858,313	+		IAI47_08785	0.69	-0.3
1,858,313	+		IAI47_08785	0.69	+2.5
1,858,313	+		IAI47_08785	0.69	+0.0
1,858,313	+		IAI47_08785	0.69	-0.7
1,858,314	-		IAI47_08785	0.69	-0.9
1,858,314	-		IAI47_08785	0.69	-0.8
1,858,314	-		IAI47_08785	0.69	+1.7
1,858,314	-		IAI47_08785	0.69	-0.6
1,858,314	-		IAI47_08785	0.69	-0.7
1,858,314	-		IAI47_08785	0.69	+1.1
1,858,314	-		IAI47_08785	0.69	-1.5
1,858,314	-		IAI47_08785	0.69	-0.4
1,858,314	-		IAI47_08785	0.69	-0.6
1,858,314	-		IAI47_08785	0.69	+0.7
1,858,314	-		IAI47_08785	0.69	-1.7
1,858,314	-		IAI47_08785	0.69	+0.9
1,858,314	-		IAI47_08785	0.69	+0.9
1,858,314	-		IAI47_08785	0.69	-0.6
1,858,314	-		IAI47_08785	0.69	+0.1
1,858,314	-		IAI47_08785	0.69	+1.4
1,858,479	+		IAI47_08785	0.81	-0.9
1,858,479	+		IAI47_08785	0.81	+1.5
1,858,479	+		IAI47_08785	0.81	-1.4
1,858,480	-		IAI47_08785	0.81	+0.5
1,858,480	-		IAI47_08785	0.81	-0.2
1,858,482	+		IAI47_08785	0.81	+0.9
1,858,482	+		IAI47_08785	0.81	-1.2
1,858,482	+		IAI47_08785	0.81	+0.8
1,858,482	+		IAI47_08785	0.81	+1.2
1,858,483	-		IAI47_08785	0.81	+1.0
1,858,503	+		IAI47_08785	0.83	-1.4
1,858,504	-		IAI47_08785	0.83	-0.8
1,858,504	-		IAI47_08785	0.83	-0.7
1,858,556	+		IAI47_08785	0.86	+2.6
1,858,557	+		IAI47_08785	0.87	-0.5
1,858,557	+		IAI47_08785	0.87	-0.3
1,858,557	+		IAI47_08785	0.87	-0.9
1,858,592	+		IAI47_08785	0.89	+2.5
1,858,592	+		IAI47_08785	0.89	+1.7
1,858,592	+		IAI47_08785	0.89	+0.6
1,858,593	-		IAI47_08785	0.89	-0.2
1,858,593	-		IAI47_08785	0.89	+0.8
1,858,593	-		IAI47_08785	0.89	+1.5
1,858,593	-		IAI47_08785	0.89	+0.7
1,858,593	-		IAI47_08785	0.89	+0.7
1,858,600	+		IAI47_08785	0.90	+0.8
1,858,600	+		IAI47_08785	0.90	-0.9
1,858,600	+		IAI47_08785	0.90	+0.2
1,858,601	-		IAI47_08785	0.90	-0.3
1,858,662	+				-1.1
1,858,664	-				-2.5
1,858,686	+				-0.1
1,858,735	-				+1.7
1,858,735	-				-0.5
1,858,760	+				+0.4
1,858,761	-				+0.7
1,858,784	+				-0.3
1,858,795	+				-0.8
1,858,795	+				+0.1
1,858,795	+				+0.7
1,858,795	+				+3.4
1,858,795	+				-0.3
1,858,796	-				+1.1
1,858,796	-				-1.2
1,858,798	+				+0.4
1,858,798	+				-2.0
1,858,798	+				+0.6
1,858,798	+				-0.1
1,858,798	+				-1.4
1,858,798	+				-1.6
1,858,798	+				-0.7
1,858,798	+				+3.2
1,858,798	+				+0.1
1,858,799	-				+1.5
1,858,799	-				+0.7
1,858,801	+				+0.5
1,858,801	+				+1.8
1,858,801	+				+0.6
1,858,801	+				-0.1
1,858,801	+				-1.9
1,858,801	+				+1.0
1,858,802	-				-0.8
1,858,802	-				-0.7
1,858,802	-				-1.3
1,858,840	-				+1.5
1,858,846	-				+0.2
1,858,846	-				+1.0
1,858,846	-				+0.4
1,858,986	+		IAI47_08790	0.11	+0.5
1,858,986	+		IAI47_08790	0.11	-0.5
1,859,021	+		IAI47_08790	0.17	+2.7
1,859,021	+		IAI47_08790	0.17	-1.7
1,859,021	+		IAI47_08790	0.17	-0.4
1,859,022	-		IAI47_08790	0.17	-1.0
1,859,022	-		IAI47_08790	0.17	-0.9
1,859,022	-		IAI47_08790	0.17	+0.7
1,859,022	-		IAI47_08790	0.17	+0.5
1,859,060	+		IAI47_08790	0.24	+0.3
1,859,060	+		IAI47_08790	0.24	+1.5
1,859,060	+		IAI47_08790	0.24	-0.1
1,859,060	+		IAI47_08790	0.24	+0.1
1,859,060	+		IAI47_08790	0.24	+1.0
1,859,061	-		IAI47_08790	0.24	+0.3
1,859,061	-		IAI47_08790	0.24	+0.2
1,859,061	-		IAI47_08790	0.24	+0.5
1,859,116	+		IAI47_08790	0.34	+1.5
1,859,116	+		IAI47_08790	0.34	+1.6
1,859,122	+		IAI47_08790	0.35	+0.4
1,859,122	+		IAI47_08790	0.35	+1.0
1,859,122	+		IAI47_08790	0.35	+0.9
1,859,122	+		IAI47_08790	0.35	+0.3
1,859,122	+		IAI47_08790	0.35	-0.2
1,859,123	-		IAI47_08790	0.35	-1.2
1,859,123	-		IAI47_08790	0.35	+1.0
1,859,123	-		IAI47_08790	0.35	+1.2
1,859,123	-		IAI47_08790	0.35	+1.5
1,859,123	-		IAI47_08790	0.35	+1.1
1,859,123	-		IAI47_08790	0.35	-0.6
1,859,130	-		IAI47_08790	0.36	-0.6
1,859,143	+		IAI47_08790	0.39	+3.2
1,859,143	+		IAI47_08790	0.39	+0.8
1,859,143	+		IAI47_08790	0.39	+3.3
1,859,207	+		IAI47_08790	0.50	+0.0
1,859,207	+		IAI47_08790	0.50	+3.3
1,859,208	-		IAI47_08790	0.50	+2.0
1,859,208	-		IAI47_08790	0.50	+1.3
1,859,208	-		IAI47_08790	0.50	-0.0
1,859,386	+		IAI47_08790	0.82	-0.5
1,859,386	+		IAI47_08790	0.82	-0.5
1,859,386	+		IAI47_08790	0.82	-0.1
1,859,387	-		IAI47_08790	0.82	-0.3
1,859,387	-		IAI47_08790	0.82	+1.2
1,859,517	+				-0.5
1,859,518	-				+1.5
1,859,518	-				+0.2
1,859,551	+				-1.0
1,859,552	-				+0.7
1,859,602	+				-0.1
1,859,602	+				-1.3
1,859,648	+		IAI47_08795	0.13	+0.9
1,859,648	+		IAI47_08795	0.13	+0.1
1,859,649	-		IAI47_08795	0.13	-0.2
1,859,672	+		IAI47_08795	0.14	-0.1
1,859,672	+		IAI47_08795	0.14	+1.0
1,859,673	-		IAI47_08795	0.15	+0.7
1,859,673	-		IAI47_08795	0.15	-0.1
1,859,673	-		IAI47_08795	0.15	-2.4
1,859,674	+		IAI47_08795	0.15	-2.0
1,859,674	+		IAI47_08795	0.15	+0.6
1,859,674	+		IAI47_08795	0.15	-1.6
1,859,675	-		IAI47_08795	0.15	+1.4
1,859,726	+		IAI47_08795	0.18	+0.7
1,859,726	+		IAI47_08795	0.18	-0.0
1,859,726	+		IAI47_08795	0.18	-0.5
1,859,726	+		IAI47_08795	0.18	+1.4
1,859,726	+		IAI47_08795	0.18	+2.7
1,859,726	+		IAI47_08795	0.18	+1.1
1,859,726	+		IAI47_08795	0.18	-0.6
1,859,726	+		IAI47_08795	0.18	+0.9
1,859,726	+		IAI47_08795	0.18	-1.0
1,859,727	-		IAI47_08795	0.18	+0.1
1,859,727	-		IAI47_08795	0.18	+2.7
1,859,727	-		IAI47_08795	0.18	-0.0
1,859,727	-		IAI47_08795	0.18	+0.5
1,859,727	-		IAI47_08795	0.18	-0.9
1,859,729	+		IAI47_08795	0.19	+0.9
1,859,729	+		IAI47_08795	0.19	+0.4
1,859,729	+		IAI47_08795	0.19	-2.7
1,859,729	+		IAI47_08795	0.19	-0.2
1,859,730	-		IAI47_08795	0.19	+1.5
1,859,730	-		IAI47_08795	0.19	-0.9
1,859,747	+		IAI47_08795	0.20	-1.0
1,859,747	+		IAI47_08795	0.20	+0.1
1,859,747	+		IAI47_08795	0.20	-0.1
1,859,748	-		IAI47_08795	0.20	+1.0
1,859,748	-		IAI47_08795	0.20	+0.9
1,859,790	+		IAI47_08795	0.23	+0.6
1,859,791	-		IAI47_08795	0.23	-1.0
1,859,817	+		IAI47_08795	0.25	+0.3
1,859,817	+		IAI47_08795	0.25	+0.1
1,859,817	+		IAI47_08795	0.25	-0.1
1,859,817	+		IAI47_08795	0.25	+1.9
1,859,818	-		IAI47_08795	0.25	+0.4
1,859,892	-		IAI47_08795	0.30	+2.2
1,859,922	-		IAI47_08795	0.33	-0.2
1,860,042	-		IAI47_08795	0.41	-0.0
1,860,068	+		IAI47_08795	0.43	+0.8
1,860,069	-		IAI47_08795	0.43	+1.1
1,860,226	-		IAI47_08795	0.55	+1.1
1,860,232	+		IAI47_08795	0.55	+1.2
1,860,233	-		IAI47_08795	0.55	+1.4
1,860,251	+		IAI47_08795	0.56	+0.7
1,860,251	+		IAI47_08795	0.56	+1.0
1,860,251	+		IAI47_08795	0.56	-0.3
1,860,251	+		IAI47_08795	0.56	-1.2
1,860,251	+		IAI47_08795	0.56	-0.4
1,860,252	-		IAI47_08795	0.57	-0.4
1,860,252	-		IAI47_08795	0.57	-1.6
1,860,252	-		IAI47_08795	0.57	-1.4
1,860,252	-		IAI47_08795	0.57	-1.4
1,860,252	-		IAI47_08795	0.57	+0.7
1,860,252	-		IAI47_08795	0.57	-0.3
1,860,252	-		IAI47_08795	0.57	-0.8
1,860,253	+		IAI47_08795	0.57	+0.9
1,860,253	+				-1.1
1,860,253	+		IAI47_08795	0.57	-1.8
1,860,254	-		IAI47_08795	0.57	+1.2
1,860,254	-		IAI47_08795	0.57	-1.5
1,860,254	-		IAI47_08795	0.57	+3.2
1,860,284	-		IAI47_08795	0.59	+0.9
1,860,292	+		IAI47_08795	0.59	-0.3
1,860,292	+		IAI47_08795	0.59	+2.5
1,860,292	+		IAI47_08795	0.59	+0.4
1,860,292	+		IAI47_08795	0.59	+1.0
1,860,293	-		IAI47_08795	0.59	-1.2
1,860,293	-		IAI47_08795	0.59	-1.3
1,860,293	-		IAI47_08795	0.59	+0.1
1,860,293	-		IAI47_08795	0.59	-0.4
1,860,299	+		IAI47_08795	0.60	+0.6
1,860,299	+		IAI47_08795	0.60	+0.9
1,860,299	+		IAI47_08795	0.60	+1.5
1,860,299	+		IAI47_08795	0.60	+0.4
1,860,300	-		IAI47_08795	0.60	+1.7
1,860,300	-		IAI47_08795	0.60	-0.7
1,860,300	-		IAI47_08795	0.60	+0.6
1,860,300	-		IAI47_08795	0.60	+0.0
1,860,300	-		IAI47_08795	0.60	-0.8
1,860,300	-		IAI47_08795	0.60	-0.3
1,860,302	+		IAI47_08795	0.60	+1.2
1,860,302	+		IAI47_08795	0.60	-1.1
1,860,302	+		IAI47_08795	0.60	-0.6
1,860,303	-		IAI47_08795	0.60	-0.1
1,860,303	-		IAI47_08795	0.60	-0.7
1,860,303	-		IAI47_08795	0.60	+0.5
1,860,303	-		IAI47_08795	0.60	+1.5
1,860,303	-		IAI47_08795	0.60	+0.8
1,860,334	-		IAI47_08795	0.62	-0.4
1,860,345	+		IAI47_08795	0.63	-0.7
1,860,346	-		IAI47_08795	0.63	+2.4
1,860,445	+		IAI47_08795	0.71	-0.3
1,860,445	+		IAI47_08795	0.71	+1.5
1,860,445	+		IAI47_08795	0.71	+0.7
1,860,445	+		IAI47_08795	0.71	+0.8
1,860,446	-		IAI47_08795	0.71	+0.0
1,860,446	-		IAI47_08795	0.71	-0.6
1,860,446	-		IAI47_08795	0.71	+0.3
1,860,446	-		IAI47_08795	0.71	+2.2
1,860,471	-		IAI47_08795	0.72	-1.6