Strain Fitness in Pantoea sp. MT58 around IAI47_07670

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,625,597	+		IAI47_07665	0.51	+0.9
1,625,597	+		IAI47_07665	0.51	-1.2
1,625,597	+		IAI47_07665	0.51	+2.4
1,625,597	+		IAI47_07665	0.51	+1.8
1,625,598	-		IAI47_07665	0.51	+0.2
1,625,598	-		IAI47_07665	0.51	-0.9
1,625,700	+		IAI47_07665	0.57	+0.1
1,625,700	+		IAI47_07665	0.57	-0.1
1,625,701	-		IAI47_07665	0.57	+0.6
1,625,701	-		IAI47_07665	0.57	+1.4
1,625,701	-		IAI47_07665	0.57	-2.0
1,625,701	-		IAI47_07665	0.57	+0.1
1,625,701	-		IAI47_07665	0.57	+0.4
1,625,727	+		IAI47_07665	0.58	+0.1
1,625,741	+		IAI47_07665	0.59	-1.0
1,625,742	-		IAI47_07665	0.59	-1.0
1,625,742	-		IAI47_07665	0.59	+1.1
1,625,834	+		IAI47_07665	0.64	+0.5
1,625,946	+		IAI47_07665	0.70	-0.8
1,625,946	+		IAI47_07665	0.70	-1.3
1,626,063	+		IAI47_07665	0.77	+0.9
1,626,063	+		IAI47_07665	0.77	+0.1
1,626,064	-		IAI47_07665	0.77	-0.7
1,626,064	-		IAI47_07665	0.77	-1.8
1,626,073	+		IAI47_07665	0.77	-1.3
1,626,074	-		IAI47_07665	0.77	+0.2
1,626,169	-		IAI47_07665	0.83	-0.3
1,626,212	-		IAI47_07665	0.85	+0.4
1,626,314	+				+0.9
1,626,317	+				-0.8
1,626,317	+				-1.3
1,626,318	-				+0.6
1,626,318	-				+0.3
1,626,318	-				-0.4
1,626,318	-				+0.4
1,626,463	-				+0.1
1,626,463	-				+1.0
1,626,472	+				+0.6
1,626,479	+				+0.8
1,626,479	+				+0.4
1,626,480	-				+0.2
1,626,509	+				-2.3
1,626,510	-				-0.8
1,626,510	-				-0.2
1,626,538	+				+1.1
1,626,538	+				-0.8
1,626,538	+				+1.1
1,626,539	-				+1.9
1,626,539	-				-0.2
1,626,539	-				-0.4
1,626,572	+				+1.6
1,626,572	+				+0.1
1,626,572	+				-1.5
1,626,573	-				-0.2
1,626,573	-				-1.0
1,626,573	-				-0.0
1,626,573	-				-0.2
1,626,601	+				+0.4
1,626,665	+		IAI47_07670	0.11	-1.5
1,626,665	+		IAI47_07670	0.11	-1.6
1,626,666	-		IAI47_07670	0.11	-1.8
1,626,666	-		IAI47_07670	0.11	+2.0
1,626,689	+		IAI47_07670	0.14	+2.7
1,626,767	+		IAI47_07670	0.23	+0.9
1,626,768	-		IAI47_07670	0.23	-0.3
1,626,768	-		IAI47_07670	0.23	+0.9
1,626,768	-		IAI47_07670	0.23	+1.0
1,626,824	-		IAI47_07670	0.30	+1.7
1,626,838	-		IAI47_07670	0.31	-0.9
1,626,980	+		IAI47_07670	0.48	-1.5
1,626,980	+		IAI47_07670	0.48	+1.7
1,626,981	-		IAI47_07670	0.48	+1.1
1,626,981	-		IAI47_07670	0.48	+0.1
1,626,981	-		IAI47_07670	0.48	-1.2
1,626,981	-		IAI47_07670	0.48	+0.1
1,626,981	-		IAI47_07670	0.48	+2.9
1,627,020	+		IAI47_07670	0.53	-0.6
1,627,020	+		IAI47_07670	0.53	-2.1
1,627,023	+		IAI47_07670	0.53	+1.4
1,627,023	+		IAI47_07670	0.53	+0.3
1,627,024	-		IAI47_07670	0.53	+2.6
1,627,024	-		IAI47_07670	0.53	+0.7
1,627,179	+		IAI47_07670	0.72	-0.4
1,627,179	+		IAI47_07670	0.72	+1.0
1,627,179	+		IAI47_07670	0.72	+0.1
1,627,179	+		IAI47_07670	0.72	-2.2
1,627,180	-		IAI47_07670	0.72	-1.1
1,627,221	+		IAI47_07670	0.77	+1.1
1,627,274	+		IAI47_07670	0.83	+1.6
1,627,275	-		IAI47_07670	0.83	+1.1
1,627,275	-		IAI47_07670	0.83	+0.7
1,627,275	-		IAI47_07670	0.83	-0.5
1,627,343	+				+1.9
1,627,343	+				+0.6
1,627,343	+				-1.2
1,627,343	+				+0.9
1,627,343	+				-0.9
1,627,344	-				+0.1
1,627,344	-				+1.4
1,627,344	-				-1.1
1,627,369	+				+2.8
1,627,369	+				+0.6
1,627,370	-				-0.8
1,627,370	-				-2.8
1,627,370	-				+0.1
1,627,413	+				+1.7
1,627,413	+				+2.0
1,627,414	-				+0.1
1,627,414	-				+2.0
1,627,414	-				-0.2
1,627,414	-				-1.0
1,627,463	+				+1.5
1,627,464	-				+2.7
1,627,466	+				-0.5
1,627,466	+				+0.4
1,627,466	+				+1.5
1,627,467	-				-1.2
1,627,504	+				+0.1
1,627,504	+				-0.1
1,627,505	-				+2.7
1,627,600	-		IAI47_07675	0.43	+0.5
1,627,600	-		IAI47_07675	0.43	-3.2
1,627,610	+		IAI47_07675	0.47	+1.4
1,627,611	-		IAI47_07675	0.47	+2.2
1,627,663	-		IAI47_07675	0.70	+0.9
1,627,663	-		IAI47_07675	0.70	+0.9
1,627,663	-		IAI47_07675	0.70	-1.1
1,627,670	+		IAI47_07675	0.73	-0.3
1,627,670	+		IAI47_07675	0.73	-0.6
1,627,670	+		IAI47_07675	0.73	-0.4
1,627,670	+		IAI47_07675	0.73	+0.9
1,627,671	-		IAI47_07675	0.74	+0.1
1,627,671	-		IAI47_07675	0.74	-0.6
1,627,671	-		IAI47_07675	0.74	+0.2
1,627,671	-		IAI47_07675	0.74	-0.5
1,627,671	-		IAI47_07675	0.74	+0.9
1,627,671	-		IAI47_07675	0.74	+0.2
1,627,671	-		IAI47_07675	0.74	+3.0
1,627,671	-		IAI47_07675	0.74	-0.6
1,627,671	-		IAI47_07675	0.74	-0.7
1,627,672	+		IAI47_07675	0.74	-0.2
1,627,673	-		IAI47_07675	0.75	+0.4
1,627,693	-		IAI47_07675	0.83	-0.0
1,627,693	-		IAI47_07675	0.83	-0.4
1,627,715	+				+2.2
1,627,715	+				+2.1
1,627,715	+				-0.7
1,627,716	-				+0.2
1,627,721	-				+0.5
1,627,730	+				-2.0
1,627,730	+				-0.9
1,627,730	+				+0.7
1,627,730	+				+2.0
1,627,730	+				+0.7
1,627,731	-				-0.5
1,627,731	-				+0.1
1,627,731	-				+2.4
1,627,731	-				-0.1
1,627,747	-				+0.8
1,627,747	-				+1.1
1,627,754	-				-1.5
1,627,758	+				-0.0
1,627,758	+				+0.8
1,627,758	+				+0.0
1,627,758	+				+0.9
1,627,759	-				+0.1
1,627,759	-				-0.2
1,627,759	-				+1.3
1,627,759	-				+0.5
1,627,759	-				+0.4
1,627,760	+				+0.5
1,627,760	+				-1.3
1,627,761	-				+0.5
1,627,761	-				-1.0
1,627,761	-				-0.5
1,627,783	+		IAI47_07680	0.12	+2.1
1,627,784	-		IAI47_07680	0.12	-1.5
1,627,826	+		IAI47_07680	0.19	+1.0
1,627,826	+		IAI47_07680	0.19	-1.7
1,627,831	+		IAI47_07680	0.20	+0.1
1,627,831	+		IAI47_07680	0.20	+2.0
1,627,831	+		IAI47_07680	0.20	-1.3
1,627,832	-		IAI47_07680	0.20	+1.0
1,627,832	-		IAI47_07680	0.20	+0.1
1,627,832	-		IAI47_07680	0.20	-1.3
1,627,832	-		IAI47_07680	0.20	+0.7
1,627,862	+		IAI47_07680	0.26	+1.4
1,627,863	-		IAI47_07680	0.26	+1.2
1,627,863	-		IAI47_07680	0.26	+0.6
1,627,863	-		IAI47_07680	0.26	+0.6
1,627,863	-		IAI47_07680	0.26	+0.3
1,627,938	+		IAI47_07680	0.39	+1.3
1,627,939	-		IAI47_07680	0.39	+0.6
1,627,963	+		IAI47_07680	0.43	+1.6
1,627,972	+		IAI47_07680	0.45	-0.8
1,627,972	+		IAI47_07680	0.45	+0.1
1,627,972	+		IAI47_07680	0.45	+1.2
1,627,973	-		IAI47_07680	0.45	-1.4
1,627,973	-		IAI47_07680	0.45	-0.2
1,627,975	+		IAI47_07680	0.46	-0.1
1,627,976	-		IAI47_07680	0.46	+0.4
1,627,976	-		IAI47_07680	0.46	+1.6
1,627,976	-		IAI47_07680	0.46	-0.4
1,627,985	-		IAI47_07680	0.47	+0.4
1,627,985	-		IAI47_07680	0.47	+0.9
1,627,998	+		IAI47_07680	0.50	-2.1
1,628,002	+		IAI47_07680	0.50	+0.5
1,628,002	+		IAI47_07680	0.50	-1.0
1,628,003	-		IAI47_07680	0.50	-2.2
1,628,003	-		IAI47_07680	0.50	-2.4
1,628,003	-		IAI47_07680	0.50	-0.9
1,628,003	-		IAI47_07680	0.50	-0.8
1,628,172	-		IAI47_07680	0.80	-1.9
1,628,172	-		IAI47_07680	0.80	-1.3
1,628,172	-		IAI47_07680	0.80	+1.1
1,628,172	-		IAI47_07680	0.80	+2.7
1,628,172	-		IAI47_07680	0.80	+0.0
1,628,198	+		IAI47_07680	0.85	-1.8
1,628,199	-		IAI47_07680	0.85	+1.8
1,628,199	-		IAI47_07680	0.85	+0.8
1,628,199	-		IAI47_07680	0.85	+0.5
1,628,199	-		IAI47_07680	0.85	-1.8
1,628,199	-		IAI47_07680	0.85	-0.6
1,628,226	+		IAI47_07680	0.90	+1.6
1,628,226	+		IAI47_07680	0.90	-1.7
1,628,227	-				-0.0
1,628,227	-				+2.5
1,628,227	-				+1.6
1,628,261	+				-0.6
1,628,262	-				+0.1
1,628,265	+				+0.8
1,628,265	+				+1.1
1,628,265	+				-1.6
1,628,265	+				-0.4
1,628,266	-				+1.1
1,628,266	-				+0.4
1,628,266	-				+0.7
1,628,266	-				+0.7
1,628,266	-				+0.1
1,628,277	+				-0.8
1,628,299	+				+1.8
1,628,300	-				-1.9
1,628,304	+				+1.4
1,628,304	+				+0.7
1,628,304	+				+0.1
1,628,304	+				-0.0
1,628,304	+				-0.5
1,628,304	+				-0.7
1,628,304	+				-0.1
1,628,304	+				+0.3
1,628,304	+				-1.3
1,628,305	-				+2.1
1,628,305	-				-0.9
1,628,305	-				+0.9
1,628,305	-				+0.2
1,628,305	-				-0.1
1,628,305	-				-0.2
1,628,305	-				+1.2
1,628,305	-				-1.2
1,628,305	-				-1.6
1,628,362	+				-2.2
1,628,374	+				-0.4
1,628,375	-				+2.1
1,628,408	+				-0.8
1,628,409	-				-0.3
1,628,409	-				+0.2