Strain Fitness in Pantoea sp. MT58 around IAI47_14085

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,974,215	-				-0.6
2,974,224	+				-0.2
2,974,239	+				+0.4
2,974,240	-				-1.5
2,974,240	-				-1.6
2,974,240	-				-0.6
2,974,294	+				+1.2
2,974,294	+				-1.6
2,974,295	-				+0.1
2,974,332	-				+0.3
2,974,439	+				-0.4
2,974,439	+				-1.4
2,974,439	+				+0.2
2,974,439	+				+0.0
2,974,440	-				-0.9
2,974,440	-				-0.7
2,974,485	+				-0.6
2,974,485	+				+0.1
2,974,485	+				+2.0
2,974,485	+				+1.8
2,974,486	-				-0.9
2,974,486	-				+2.3
2,974,486	-				-2.6
2,974,486	-				-0.1
2,974,486	-				-1.1
2,974,486	-				-0.9
2,974,566	+				+0.8
2,974,572	+				+0.2
2,974,573	-				-0.2
2,974,573	-				+1.1
2,974,573	-				-1.7
2,974,594	-				-0.4
2,974,622	+				+0.6
2,974,622	+				+1.9
2,974,622	+				-1.9
2,974,622	+				+1.3
2,974,623	-				+2.3
2,974,623	-				-0.0
2,974,623	-				+2.4
2,974,623	-				+1.0
2,974,638	-				+1.2
2,974,644	+				-0.1
2,974,644	+				-0.6
2,974,644	+				+0.1
2,974,644	+				-0.7
2,974,645	-				-0.4
2,974,645	-				+0.6
2,974,645	-				+0.2
2,974,646	+				+1.8
2,974,646	+				-1.2
2,974,647	-				+0.2
2,974,647	-				-0.2
2,974,647	-				+1.0
2,974,647	-				+2.3
2,974,656	+				+0.4
2,974,656	+				+1.8
2,974,656	+				-1.1
2,974,657	-				+0.3
2,974,660	+				+1.5
2,974,661	-				-2.5
2,974,716	+				-0.4
2,974,716	+				-0.4
2,974,716	+				-1.1
2,974,716	+				-2.3
2,974,716	+				+0.8
2,974,716	+				-1.8
2,974,717	-				+1.4
2,974,717	-				-1.5
2,974,717	-				-0.4
2,974,717	-				+1.2
2,974,776	+				-1.2
2,974,777	-				-1.4
2,974,777	-				+1.7
2,974,822	+				+0.6
2,974,822	+				+0.6
2,974,823	-				+0.7
2,974,857	+				+1.6
2,974,857	+				-0.8
2,974,857	+				-1.3
2,974,857	+				+0.3
2,974,857	+				+0.0
2,974,857	+				-1.2
2,974,858	-				-0.2
2,974,858	-				+1.0
2,974,858	-				+0.8
2,974,858	-				+1.0
2,974,869	+				+1.1
2,974,870	-				-1.4
2,974,870	-				-0.2
2,974,870	-				+0.6
2,974,873	-				+0.5
2,974,873	-				+0.8
2,974,873	-				+0.6
2,974,873	-				-0.8
2,974,873	-				+1.2
2,974,873	-				-2.6
2,974,896	+		IAI47_14080	0.15	+1.8
2,974,896	+		IAI47_14080	0.15	+0.5
2,974,896	+		IAI47_14080	0.15	+0.9
2,974,968	+		IAI47_14080	0.45	-0.0
2,974,968	+		IAI47_14080	0.45	+0.5
2,974,969	-		IAI47_14080	0.45	+0.1
2,974,969	-		IAI47_14080	0.45	-0.7
2,974,990	+		IAI47_14080	0.54	+0.3
2,974,990	+		IAI47_14080	0.54	-0.5
2,974,990	+		IAI47_14080	0.54	+1.6
2,974,990	+		IAI47_14080	0.54	+0.8
2,974,990	+		IAI47_14080	0.54	+3.4
2,974,991	-		IAI47_14080	0.54	-0.5
2,975,010	+		IAI47_14080	0.62	-1.9
2,975,011	-		IAI47_14080	0.62	-1.4
2,975,011	-		IAI47_14080	0.62	+1.1
2,975,020	+		IAI47_14080	0.66	-0.8
2,975,101	+				-2.1
2,975,102	-				-0.9
2,975,115	+				+0.5
2,975,115	+				+0.2
2,975,115	+				+0.4
2,975,116	-				+1.3
2,975,150	+				-0.4
2,975,156	+				+1.5
2,975,157	-				+0.5
2,975,157	-				-0.4
2,975,157	-				-1.2
2,975,157	-				+0.9
2,975,216	+				-0.5
2,975,216	+				-0.6
2,975,216	+				+0.3
2,975,217	-				-0.4
2,975,217	-				-0.9
2,975,266	-				+1.6
2,975,321	+				+1.5
2,975,321	+				+0.8
2,975,322	-				+3.5
2,975,322	-				+0.2
2,975,322	-				-0.3
2,975,421	+		IAI47_14085	0.16	+1.1
2,975,421	+		IAI47_14085	0.16	-1.7
2,975,421	+		IAI47_14085	0.16	+0.8
2,975,454	+		IAI47_14085	0.18	-0.9
2,975,465	-		IAI47_14085	0.19	+0.2
2,975,488	-		IAI47_14085	0.21	-0.2
2,975,488	-		IAI47_14085	0.21	+1.2
2,975,488	-		IAI47_14085	0.21	+2.1
2,975,518	-		IAI47_14085	0.23	-0.4
2,975,560	-		IAI47_14085	0.26	+0.6
2,975,561	+		IAI47_14085	0.26	+1.1
2,975,561	+		IAI47_14085	0.26	-1.4
2,975,561	+		IAI47_14085	0.26	-1.1
2,975,561	+		IAI47_14085	0.26	-0.4
2,975,561	+		IAI47_14085	0.26	+1.1
2,975,561	+		IAI47_14085	0.26	+0.7
2,975,561	+		IAI47_14085	0.26	-1.7
2,975,562	-		IAI47_14085	0.26	+1.5
2,975,562	-		IAI47_14085	0.26	+1.9
2,975,562	-		IAI47_14085	0.26	+1.2
2,975,562	-		IAI47_14085	0.26	+0.6
2,975,562	-		IAI47_14085	0.26	+1.0
2,975,562	-		IAI47_14085	0.26	+0.3
2,975,562	-		IAI47_14085	0.26	+1.1
2,975,562	-		IAI47_14085	0.26	+0.8
2,975,562	-		IAI47_14085	0.26	-1.3
2,975,562	-		IAI47_14085	0.26	+0.3
2,975,562	-		IAI47_14085	0.26	+1.3
2,975,565	+		IAI47_14085	0.27	-0.1
2,975,565	+		IAI47_14085	0.27	+0.6
2,975,565	+		IAI47_14085	0.27	+0.6
2,975,565	+		IAI47_14085	0.27	-0.5
2,975,565	+		IAI47_14085	0.27	-0.8
2,975,565	+		IAI47_14085	0.27	+0.3
2,975,565	+		IAI47_14085	0.27	+0.6
2,975,566	-		IAI47_14085	0.27	-1.4
2,975,566	-		IAI47_14085	0.27	+0.6
2,975,566	-		IAI47_14085	0.27	+2.4
2,975,566	-		IAI47_14085	0.27	+1.4
2,975,569	+		IAI47_14085	0.27	+1.7
2,975,570	-		IAI47_14085	0.27	-0.7
2,975,570	-		IAI47_14085	0.27	+0.6
2,975,595	+		IAI47_14085	0.29	-2.2
2,975,596	-		IAI47_14085	0.29	+1.2
2,975,769	-		IAI47_14085	0.42	+0.4
2,975,839	+		IAI47_14085	0.47	+0.6
2,975,839	+		IAI47_14085	0.47	+1.7
2,975,906	+		IAI47_14085	0.52	+0.7
2,975,906	+		IAI47_14085	0.52	+2.2
2,975,906	+		IAI47_14085	0.52	-0.5
2,975,906	+		IAI47_14085	0.52	-1.1
2,975,907	-		IAI47_14085	0.53	-0.0
2,975,907	-		IAI47_14085	0.53	+0.1
2,975,907	-		IAI47_14085	0.53	+0.8
2,975,907	-		IAI47_14085	0.53	+1.4
2,975,907	-		IAI47_14085	0.53	+1.1
2,975,928	+		IAI47_14085	0.54	+0.9
2,975,934	+		IAI47_14085	0.55	-1.6
2,975,986	-		IAI47_14085	0.59	+0.6
2,976,015	+		IAI47_14085	0.61	+0.1
2,976,015	+		IAI47_14085	0.61	+0.8
2,976,015	+		IAI47_14085	0.61	+0.5
2,976,015	+		IAI47_14085	0.61	+0.2
2,976,016	-		IAI47_14085	0.61	-1.5
2,976,016	-		IAI47_14085	0.61	+0.8
2,976,030	+		IAI47_14085	0.62	+1.9
2,976,119	+		IAI47_14085	0.69	+1.1
2,976,119	+		IAI47_14085	0.69	+0.7
2,976,119	+		IAI47_14085	0.69	+3.3
2,976,119	+		IAI47_14085	0.69	+1.9
2,976,119	+		IAI47_14085	0.69	-0.9
2,976,120	-		IAI47_14085	0.69	+0.9
2,976,120	-		IAI47_14085	0.69	+1.2
2,976,120	-		IAI47_14085	0.69	+0.2
2,976,120	-		IAI47_14085	0.69	-0.4
2,976,120	-		IAI47_14085	0.69	+0.9
2,976,157	+		IAI47_14085	0.72	+0.5
2,976,158	-		IAI47_14085	0.72	+0.5
2,976,175	+		IAI47_14085	0.73	-0.7
2,976,175	+		IAI47_14085	0.73	-1.7
2,976,176	-		IAI47_14085	0.73	+2.2
2,976,191	+		IAI47_14085	0.74	-0.7
2,976,191	+		IAI47_14085	0.74	+2.4
2,976,191	+		IAI47_14085	0.74	-0.8
2,976,191	+		IAI47_14085	0.74	-1.2
2,976,191	+		IAI47_14085	0.74	+0.8
2,976,191	+		IAI47_14085	0.74	-0.1
2,976,192	-		IAI47_14085	0.74	+0.0
2,976,192	-		IAI47_14085	0.74	-0.5
2,976,213	+		IAI47_14085	0.76	-0.2
2,976,213	+		IAI47_14085	0.76	+0.6
2,976,213	+		IAI47_14085	0.76	-0.8
2,976,214	-		IAI47_14085	0.76	+1.6
2,976,283	-		IAI47_14085	0.81	-0.2
2,976,370	+		IAI47_14085	0.88	+1.4
2,976,370	+		IAI47_14085	0.88	+2.5
2,976,371	-		IAI47_14085	0.88	-2.1
2,976,371	-		IAI47_14085	0.88	+2.2
2,976,390	+		IAI47_14085	0.89	+1.3
2,976,390	+		IAI47_14085	0.89	+1.6
2,976,390	+		IAI47_14085	0.89	-0.9
2,976,390	+		IAI47_14085	0.89	-1.4
2,976,391	-		IAI47_14085	0.89	-1.3
2,976,393	+		IAI47_14085	0.89	+2.6
2,976,393	+		IAI47_14085	0.89	-0.8
2,976,393	+		IAI47_14085	0.89	+2.0
2,976,393	-		IAI47_14085	0.89	+1.1
2,976,394	-		IAI47_14085	0.90	+1.9
2,976,394	-		IAI47_14085	0.90	-1.8
2,976,394	-		IAI47_14085	0.90	-1.3
2,976,399	+		IAI47_14085	0.90	-0.1
2,976,399	+		IAI47_14085	0.90	-0.8
2,976,400	-				+2.8
2,976,400	-				+1.0
2,976,457	-				+1.4
2,976,457	-				+0.6
2,976,472	-				-1.9
2,976,518	+				-1.8
2,976,518	+				+0.0
2,976,518	+				+1.5
2,976,518	+				+1.6
2,976,519	-				+1.3
2,976,519	-				+3.3
2,976,519	-				+0.5
2,976,519	-				-0.1
2,976,519	-				-0.3
2,976,519	-				-1.8
2,976,519	-				-1.6
2,976,519	-				-0.8
2,976,523	+				+0.8
2,976,523	+				+2.0
2,976,523	+				-2.4
2,976,524	-				-0.6
2,976,524	-				+1.1
2,976,524	-				+0.0
2,976,524	-				+1.6
2,976,531	+				+1.7
2,976,531	+				-0.8
2,976,532	-				+1.6
2,976,532	-				-0.1
2,976,532	-				+3.9
2,976,563	+				+2.7
2,976,563	+				+0.7
2,976,576	+				-1.4
2,976,576	+				+0.7
2,976,577	-				+1.1
2,976,577	-				+2.1
2,976,579	+				-0.5
2,976,617	+				+0.6
2,976,617	+				+1.1
2,976,617	+				+0.2
2,976,617	+				-0.6
2,976,618	-				-0.7
2,976,618	-				-2.9
2,976,618	-				-0.2
2,976,618	-				+0.0
2,976,626	+				+2.8
2,976,626	+				+0.0
2,976,626	+				+0.9
2,976,627	-				+0.6
2,976,627	-				+0.1
2,976,627	-				-2.6
2,976,627	-				-0.8
2,976,668	+				+0.1
2,976,747	-				-1.7
2,976,749	+				-2.4
2,976,750	-				-0.1
2,976,799	-				+0.3
2,976,808	+				-0.7
2,976,808	+				-1.2
2,976,809	-				+0.5
2,976,848	+				-1.7
2,976,848	+				-2.2
2,976,848	+				-1.9
2,976,848	+				-1.4
2,976,848	+				+1.5
2,976,848	+				+2.2
2,976,849	-				+1.2
2,976,849	-				+1.1
2,976,853	+				+0.0
2,976,854	-				-0.7
2,976,854	-				+1.3
2,976,854	-				-1.9
2,976,880	+				-0.8
2,976,889	+				+1.2
2,976,890	-				+1.1
2,976,890	-				-0.9
2,976,925	+				+1.2
2,976,926	-				+0.2
2,976,969	-		IAI47_14090	0.13	-0.7
2,977,003	+		IAI47_14090	0.16	-0.2
2,977,003	+		IAI47_14090	0.16	+0.1
2,977,003	+		IAI47_14090	0.16	+1.8
2,977,003	+		IAI47_14090	0.16	-1.9
2,977,003	+		IAI47_14090	0.16	+0.7
2,977,004	-		IAI47_14090	0.16	-1.3
2,977,004	-		IAI47_14090	0.16	-0.4
2,977,004	-		IAI47_14090	0.16	+0.6
2,977,004	-		IAI47_14090	0.16	+0.4
2,977,004	-		IAI47_14090	0.16	-1.5
2,977,090	-		IAI47_14090	0.23	+0.0
2,977,146	+		IAI47_14090	0.28	+0.8
2,977,146	+				-0.2
2,977,146	+		IAI47_14090	0.28	-0.2
2,977,146	+		IAI47_14090	0.28	-0.8
2,977,146	+		IAI47_14090	0.28	-0.0
2,977,147	-		IAI47_14090	0.28	+1.1
2,977,158	+		IAI47_14090	0.29	+0.1
2,977,158	+		IAI47_14090	0.29	-1.9
2,977,158	+		IAI47_14090	0.29	+0.7
2,977,159	-		IAI47_14090	0.29	+0.1
2,977,159	-		IAI47_14090	0.29	+1.0
2,977,159	-		IAI47_14090	0.29	-0.3
2,977,172	+		IAI47_14090	0.30	+0.1
2,977,237	+		IAI47_14090	0.36	+0.4
2,977,237	+		IAI47_14090	0.36	-1.1
2,977,278	+		IAI47_14090	0.40	-0.4
2,977,415	-		IAI47_14090	0.51	-2.4
2,977,433	+		IAI47_14090	0.53	-0.0
2,977,433	+		IAI47_14090	0.53	+0.7
2,977,433	+				-0.6
2,977,433	+		IAI47_14090	0.53	-2.6
2,977,434	-		IAI47_14090	0.53	+2.6
2,977,434	-		IAI47_14090	0.53	+2.0
2,977,434	-		IAI47_14090	0.53	-0.5
2,977,434	-		IAI47_14090	0.53	+0.7
2,977,434	-		IAI47_14090	0.53	-1.2
2,977,434	-		IAI47_14090	0.53	+2.8
2,977,434	-		IAI47_14090	0.53	+1.3
2,977,434	-		IAI47_14090	0.53	-1.1
2,977,434	-		IAI47_14090	0.53	+0.8
2,977,434	-		IAI47_14090	0.53	+0.6
2,977,495	+		IAI47_14090	0.58	+1.6
2,977,496	-		IAI47_14090	0.58	-2.3