Strain Fitness in Pantoea sp. MT58 around IAI47_13405

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,842,938	+				+2.5
2,842,939	-				-1.5
2,842,963	-				+0.5
2,842,988	+				+0.1
2,842,988	+				-0.2
2,842,988	+				+0.1
2,842,988	+				+0.5
2,842,988	+				+0.8
2,842,988	+				+2.8
2,842,989	-				+1.2
2,842,989	-				+1.6
2,842,989	-				-1.1
2,842,989	-				+0.8
2,842,989	-				+0.7
2,842,989	-				+0.0
2,842,989	-				+0.0
2,842,989	-				+1.7
2,842,990	-				+0.8
2,843,023	+				-0.4
2,843,050	+				+1.0
2,843,055	+				-0.8
2,843,056	-				-0.0
2,843,056	-				-1.4
2,843,062	-				+0.4
2,843,062	-				-0.1
2,843,067	+				+1.8
2,843,137	+				+1.2
2,843,137	+				-2.1
2,843,138	-				-1.0
2,843,178	+				+0.2
2,843,178	+				+1.0
2,843,178	+				+1.8
2,843,178	+				-1.9
2,843,178	+				+1.6
2,843,178	+				+1.8
2,843,179	-				+0.5
2,843,179	-				-0.9
2,843,179	-				+2.1
2,843,179	-				-0.7
2,843,188	-				+1.1
2,843,188	-				-1.1
2,843,188	-				+0.7
2,843,199	+		IAI47_13400	0.10	-0.4
2,843,200	-		IAI47_13400	0.10	+0.8
2,843,200	-		IAI47_13400	0.10	+0.9
2,843,282	+		IAI47_13400	0.24	-0.1
2,843,284	+		IAI47_13400	0.25	-0.6
2,843,284	+		IAI47_13400	0.25	-1.9
2,843,284	+		IAI47_13400	0.25	-0.4
2,843,284	+		IAI47_13400	0.25	-1.0
2,843,284	+		IAI47_13400	0.25	-0.2
2,843,284	+		IAI47_13400	0.25	-0.1
2,843,284	+		IAI47_13400	0.25	-1.2
2,843,285	-		IAI47_13400	0.25	-2.4
2,843,302	+		IAI47_13400	0.28	+0.6
2,843,302	+		IAI47_13400	0.28	+0.8
2,843,303	-		IAI47_13400	0.28	-1.2
2,843,351	-		IAI47_13400	0.36	+0.7
2,843,393	-		IAI47_13400	0.43	+1.2
2,843,393	-		IAI47_13400	0.43	+0.2
2,843,408	+		IAI47_13400	0.46	+1.0
2,843,408	+		IAI47_13400	0.46	-0.0
2,843,409	-		IAI47_13400	0.46	-1.5
2,843,409	-		IAI47_13400	0.46	+0.3
2,843,409	-		IAI47_13400	0.46	-0.5
2,843,492	+		IAI47_13400	0.60	+0.5
2,843,492	+		IAI47_13400	0.60	-0.3
2,843,493	-		IAI47_13400	0.60	+0.4
2,843,500	+		IAI47_13400	0.61	-0.6
2,843,501	-		IAI47_13400	0.62	-1.5
2,843,537	+		IAI47_13400	0.68	-0.5
2,843,537	+		IAI47_13400	0.68	+0.5
2,843,537	+		IAI47_13400	0.68	-0.2
2,843,538	-		IAI47_13400	0.68	-2.1
2,843,548	+		IAI47_13400	0.70	-1.0
2,843,548	+		IAI47_13400	0.70	-1.5
2,843,548	+		IAI47_13400	0.70	+0.4
2,843,548	+		IAI47_13400	0.70	-1.2
2,843,548	+		IAI47_13400	0.70	+0.8
2,843,548	+		IAI47_13400	0.70	+0.6
2,843,548	+		IAI47_13400	0.70	-0.4
2,843,548	+		IAI47_13400	0.70	+0.0
2,843,548	+		IAI47_13400	0.70	-2.7
2,843,548	+		IAI47_13400	0.70	-1.4
2,843,548	+		IAI47_13400	0.70	-0.7
2,843,548	+		IAI47_13400	0.70	-0.1
2,843,549	-		IAI47_13400	0.70	+0.6
2,843,549	-		IAI47_13400	0.70	+0.4
2,843,549	-		IAI47_13400	0.70	-0.1
2,843,591	+		IAI47_13400	0.77	-0.3
2,843,641	+		IAI47_13400	0.85	-2.0
2,843,641	+		IAI47_13400	0.85	+0.0
2,843,641	+		IAI47_13400	0.85	+0.5
2,843,641	+		IAI47_13400	0.85	-0.6
2,843,642	-		IAI47_13400	0.86	+0.2
2,843,642	-		IAI47_13400	0.86	-1.4
2,843,642	-		IAI47_13400	0.86	+0.5
2,843,642	-		IAI47_13400	0.86	+0.2
2,843,675	+				+2.3
2,843,675	+				+1.2
2,843,675	+				+0.9
2,843,676	-				-2.8
2,843,726	+				-0.1
2,843,726	+				+0.0
2,843,726	+				+1.8
2,843,726	+				+0.3
2,843,726	+				-1.3
2,843,727	-				-0.5
2,843,727	-				-1.7
2,843,727	-				-1.0
2,843,727	-				+0.1
2,843,727	-				+1.2
2,843,727	-				+2.6
2,843,727	-				-0.7
2,843,796	+				-0.5
2,843,796	+				-0.7
2,843,796	+				-1.2
2,843,796	+				+1.3
2,843,797	-				+0.0
2,843,799	-				-1.0
2,843,808	+				-1.5
2,843,809	-				+0.6
2,843,843	+				+0.8
2,843,843	+				-1.7
2,843,844	-				+1.7
2,843,844	-				-0.0
2,843,844	-				-0.9
2,843,848	-				+1.5
2,843,848	-				-1.5
2,843,891	+				-0.4
2,843,893	+				-0.5
2,843,894	-				+2.4
2,843,894	-				-0.8
2,843,894	-				+1.7
2,843,894	-				+0.7
2,843,894	-				+0.4
2,843,894	-				+1.3
2,843,894	-				-0.5
2,843,958	+				-0.8
2,843,959	-				-1.4
2,843,959	-				-1.0
2,843,962	+				-1.8
2,843,962	+				+2.5
2,843,962	+				+1.4
2,843,962	+				-0.8
2,843,963	-				+0.9
2,843,969	+				-0.7
2,843,969	+				-2.4
2,843,970	-				-0.1
2,843,975	+				-1.6
2,843,975	+				+0.9
2,843,990	-				-2.0
2,843,998	+		IAI47_13405	0.11	-2.3
2,843,998	+		IAI47_13405	0.11	-1.8
2,843,999	-		IAI47_13405	0.11	-1.1
2,843,999	-		IAI47_13405	0.11	-0.2
2,844,019	+		IAI47_13405	0.14	-0.3
2,844,019	+		IAI47_13405	0.14	-0.8
2,844,019	+		IAI47_13405	0.14	-1.5
2,844,020	-		IAI47_13405	0.14	-1.1
2,844,062	+		IAI47_13405	0.22	+0.0
2,844,062	+		IAI47_13405	0.22	-1.5
2,844,119	+		IAI47_13405	0.31	+1.0
2,844,179	-		IAI47_13405	0.42	-2.0
2,844,228	+		IAI47_13405	0.50	-1.2
2,844,228	+		IAI47_13405	0.50	-1.8
2,844,228	+		IAI47_13405	0.50	+1.0
2,844,228	+		IAI47_13405	0.50	+2.3
2,844,229	-		IAI47_13405	0.50	-1.3
2,844,244	+		IAI47_13405	0.53	-1.7
2,844,245	-		IAI47_13405	0.53	-1.3
2,844,245	-		IAI47_13405	0.53	-1.2
2,844,245	-		IAI47_13405	0.53	+0.2
2,844,245	-		IAI47_13405	0.53	-0.6
2,844,248	+		IAI47_13405	0.54	-0.2
2,844,248	+		IAI47_13405	0.54	-1.0
2,844,249	-		IAI47_13405	0.54	-2.5
2,844,249	-		IAI47_13405	0.54	-0.4
2,844,249	-		IAI47_13405	0.54	-2.5
2,844,249	-		IAI47_13405	0.54	-1.5
2,844,249	-		IAI47_13405	0.54	-2.3
2,844,249	-		IAI47_13405	0.54	-2.4
2,844,249	-		IAI47_13405	0.54	+1.2
2,844,274	+		IAI47_13405	0.58	-0.7
2,844,274	+		IAI47_13405	0.58	-2.0
2,844,274	+		IAI47_13405	0.58	+0.7
2,844,275	-		IAI47_13405	0.58	-1.8
2,844,275	-		IAI47_13405	0.58	-1.4
2,844,275	-		IAI47_13405	0.58	+0.8
2,844,319	+		IAI47_13405	0.66	-1.8
2,844,320	-		IAI47_13405	0.66	-2.0
2,844,515	+				+0.0
2,844,515	+				+1.1
2,844,516	-				-1.1
2,844,516	-				-1.1
2,844,524	+				-0.5
2,844,524	+				-1.1
2,844,673	+				+1.5
2,844,673	+				-1.3
2,844,673	+				+1.0
2,844,673	+				+1.5
2,844,673	+				-0.6
2,844,673	+				+0.0
2,844,673	+				-2.5
2,844,674	-				-0.6
2,844,674	-				-0.9
2,844,674	-				-0.2
2,844,674	-				-1.6
2,844,711	+				+0.5
2,844,711	+				-2.3
2,844,711	+				-0.1
2,844,712	-				+1.8
2,844,712	-				-0.5
2,844,720	+				+0.6
2,844,720	+				+0.4
2,844,720	+				+1.2
2,844,720	+				+0.5
2,844,720	+				-1.1
2,844,720	+				+0.2
2,844,720	+				+1.7
2,844,720	+				+0.9
2,844,721	-				+2.0
2,844,721	-				-1.1
2,844,721	-				-1.5
2,844,721	-				+1.1
2,844,721	-				+1.4
2,844,722	+				-0.6
2,844,722	+				+0.4
2,844,722	+				+0.9
2,844,722	+				+0.8
2,844,722	+				+1.4
2,844,722	+				+2.2
2,844,722	+				+0.2
2,844,722	+				+0.5
2,844,722	+				-0.5
2,844,722	+				+1.0
2,844,723	-				+1.4
2,844,723	-				+1.6
2,844,723	-				-1.1
2,844,723	-				-2.1
2,844,723	-				-0.2
2,844,726	+				-0.9
2,844,726	+				-1.1
2,844,726	+				+1.0
2,844,726	+				-2.8
2,844,726	+				+2.9
2,844,726	+				+0.5
2,844,727	-				+0.6
2,844,727	-				+1.6
2,844,727	-				+0.8
2,844,727	-				-0.1
2,844,759	+				+0.9
2,844,759	+				-0.8
2,844,759	+				-1.0
2,844,760	-				+2.1
2,844,764	+				+0.2
2,844,764	+				+0.4
2,844,764	+				-0.6
2,844,765	-				+0.6
2,844,771	+				+0.2
2,844,772	-				+0.5
2,844,844	+				-1.2
2,844,845	-				-1.5
2,844,845	-				+1.6
2,844,961	+		IAI47_13410	0.11	-0.7
2,844,962	-		IAI47_13410	0.11	-1.4
2,845,030	+		IAI47_13410	0.15	-2.0
2,845,030	+		IAI47_13410	0.15	-0.1
2,845,030	+		IAI47_13410	0.15	+0.2
2,845,030	+		IAI47_13410	0.15	-2.7
2,845,030	+		IAI47_13410	0.15	+1.5
2,845,031	-		IAI47_13410	0.15	-0.7
2,845,031	-		IAI47_13410	0.15	+0.4
2,845,056	+		IAI47_13410	0.17	-2.1
2,845,056	+		IAI47_13410	0.17	-2.0
2,845,057	-		IAI47_13410	0.17	-2.0
2,845,057	-		IAI47_13410	0.17	-0.6
2,845,138	+		IAI47_13410	0.21	+0.4
2,845,138	+		IAI47_13410	0.21	-0.2
2,845,138	+		IAI47_13410	0.21	-2.2
2,845,139	-		IAI47_13410	0.21	-1.3
2,845,139	-		IAI47_13410	0.21	+0.6
2,845,139	-		IAI47_13410	0.21	+0.5
2,845,171	-		IAI47_13410	0.23	+0.8
2,845,275	-		IAI47_13410	0.29	+0.3
2,845,289	-		IAI47_13410	0.29	-0.8
2,845,326	+		IAI47_13410	0.32	-0.5
2,845,372	+		IAI47_13410	0.34	+0.3
2,845,372	+		IAI47_13410	0.34	-3.7
2,845,373	-		IAI47_13410	0.34	-2.5
2,845,402	+		IAI47_13410	0.36	+2.4
2,845,402	+		IAI47_13410	0.36	-0.5
2,845,402	+		IAI47_13410	0.36	-0.6
2,845,402	+		IAI47_13410	0.36	+0.6
2,845,402	+		IAI47_13410	0.36	+0.0
2,845,402	+		IAI47_13410	0.36	+1.0
2,845,402	+		IAI47_13410	0.36	+2.1
2,845,402	+		IAI47_13410	0.36	+0.0
2,845,403	-		IAI47_13410	0.36	-1.8
2,845,403	-		IAI47_13410	0.36	-1.1
2,845,403	-		IAI47_13410	0.36	+0.3
2,845,403	-		IAI47_13410	0.36	+0.1
2,845,403	-		IAI47_13410	0.36	+0.8
2,845,465	+		IAI47_13410	0.39	+0.9
2,845,465	+		IAI47_13410	0.39	+1.9
2,845,466	-		IAI47_13410	0.39	-0.5