Strain Fitness in Pantoea sp. MT58 around IAI47_11785

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,498,944	+		IAI47_11780	0.33	-1.2
2,498,945	-		IAI47_11780	0.34	+0.8
2,498,945	-		IAI47_11780	0.34	+0.6
2,499,077	+		IAI47_11780	0.43	-1.2
2,499,078	-		IAI47_11780	0.43	-0.4
2,499,083	+		IAI47_11780	0.43	+0.9
2,499,084	-		IAI47_11780	0.43	+0.4
2,499,120	+		IAI47_11780	0.46	-0.8
2,499,120	+		IAI47_11780	0.46	+1.1
2,499,120	+		IAI47_11780	0.46	+1.3
2,499,120	+		IAI47_11780	0.46	+0.1
2,499,121	-		IAI47_11780	0.46	-1.6
2,499,121	-		IAI47_11780	0.46	-0.1
2,499,121	-		IAI47_11780	0.46	+0.1
2,499,121	-		IAI47_11780	0.46	+0.4
2,499,121	-		IAI47_11780	0.46	-0.9
2,499,210	-		IAI47_11780	0.52	-0.4
2,499,302	+		IAI47_11780	0.59	-0.3
2,499,302	+		IAI47_11780	0.59	+0.7
2,499,303	-		IAI47_11780	0.59	-1.4
2,499,304	+		IAI47_11780	0.59	-1.2
2,499,304	+		IAI47_11780	0.59	-1.3
2,499,305	-		IAI47_11780	0.59	+1.5
2,499,305	-		IAI47_11780	0.59	-2.2
2,499,305	-		IAI47_11780	0.59	+1.7
2,499,305	-		IAI47_11780	0.59	+1.6
2,499,305	-		IAI47_11780	0.59	+0.5
2,499,305	-		IAI47_11780	0.59	-0.8
2,499,317	+		IAI47_11780	0.60	-1.3
2,499,317	+		IAI47_11780	0.60	+1.6
2,499,318	-		IAI47_11780	0.60	-1.6
2,499,393	-		IAI47_11780	0.65	+0.4
2,499,467	+		IAI47_11780	0.70	-0.3
2,499,467	+		IAI47_11780	0.70	+0.7
2,499,467	+		IAI47_11780	0.70	+0.9
2,499,467	+		IAI47_11780	0.70	+1.0
2,499,468	-		IAI47_11780	0.70	-0.8
2,499,468	-		IAI47_11780	0.70	+0.7
2,499,472	+		IAI47_11780	0.71	+0.5
2,499,472	+		IAI47_11780	0.71	+1.0
2,499,472	+		IAI47_11780	0.71	+1.1
2,499,473	-		IAI47_11780	0.71	+1.4
2,499,473	-		IAI47_11780	0.71	+1.8
2,499,473	-		IAI47_11780	0.71	-0.1
2,499,542	+		IAI47_11780	0.76	-0.6
2,499,542	+		IAI47_11780	0.76	-1.2
2,499,543	-		IAI47_11780	0.76	+1.2
2,499,543	-		IAI47_11780	0.76	-0.3
2,499,551	+		IAI47_11780	0.76	-0.8
2,499,551	+		IAI47_11780	0.76	+0.2
2,499,552	-		IAI47_11780	0.76	+2.1
2,499,552	-		IAI47_11780	0.76	-0.7
2,499,552	-		IAI47_11780	0.76	+0.6
2,499,635	+		IAI47_11780	0.82	-0.0
2,499,635	+		IAI47_11780	0.82	+0.2
2,499,636	-		IAI47_11780	0.82	-0.4
2,499,721	-		IAI47_11780	0.88	-1.0
2,499,761	+				+0.9
2,499,820	+				+0.8
2,499,820	+				-1.0
2,499,820	+				+0.5
2,499,821	-				+0.5
2,499,821	-				+0.9
2,499,864	+				+0.1
2,499,865	-				-0.9
2,499,909	+				-0.5
2,499,909	+				+0.4
2,499,910	-				-0.8
2,499,910	-				-0.9
2,499,910	-				+0.1
2,499,955	+				-2.2
2,499,956	-				-0.3
2,499,956	-				+1.0
2,499,957	+				-0.4
2,499,957	+				-0.4
2,499,970	+				+1.0
2,499,971	-				+1.1
2,499,971	-				-0.7
2,500,016	+				+3.0
2,500,027	+				+0.5
2,500,027	+				-1.2
2,500,027	+				-0.2
2,500,028	-				+0.2
2,500,028	-				-1.5
2,500,028	-				-0.6
2,500,142	+		IAI47_11785	0.16	+0.3
2,500,142	+		IAI47_11785	0.16	+1.0
2,500,159	+		IAI47_11785	0.17	+0.3
2,500,159	+		IAI47_11785	0.17	+1.3
2,500,377	+		IAI47_11785	0.32	-1.5
2,500,377	+		IAI47_11785	0.32	-0.3
2,500,378	-		IAI47_11785	0.32	-0.8
2,500,378	-		IAI47_11785	0.32	-1.9
2,500,378	-		IAI47_11785	0.32	+1.3
2,500,450	+		IAI47_11785	0.36	+1.2
2,500,450	+		IAI47_11785	0.36	-0.7
2,500,504	-		IAI47_11785	0.40	+0.2
2,500,602	+		IAI47_11785	0.47	+2.1
2,500,602	+		IAI47_11785	0.47	-0.9
2,500,602	+		IAI47_11785	0.47	-2.2
2,500,602	+		IAI47_11785	0.47	-0.3
2,500,602	+		IAI47_11785	0.47	+0.5
2,500,603	-		IAI47_11785	0.47	+0.8
2,500,603	-		IAI47_11785	0.47	-0.6
2,500,603	-		IAI47_11785	0.47	-2.7
2,500,603	-		IAI47_11785	0.47	+0.6
2,500,603	-		IAI47_11785	0.47	-2.3
2,500,603	-		IAI47_11785	0.47	-0.4
2,500,603	-		IAI47_11785	0.47	-1.0
2,500,603	-		IAI47_11785	0.47	-1.4
2,500,603	-		IAI47_11785	0.47	-2.3
2,500,603	-		IAI47_11785	0.47	+1.1
2,500,603	-		IAI47_11785	0.47	+0.9
2,500,603	-		IAI47_11785	0.47	-1.2
2,500,670	-		IAI47_11785	0.51	-1.1
2,500,687	+		IAI47_11785	0.52	+1.0
2,500,687	+		IAI47_11785	0.52	+1.5
2,500,687	+		IAI47_11785	0.52	-0.9
2,500,688	-		IAI47_11785	0.52	+0.8
2,500,688	-		IAI47_11785	0.52	-1.2
2,500,715	+		IAI47_11785	0.54	+0.1
2,500,715	+		IAI47_11785	0.54	+1.1
2,500,716	-		IAI47_11785	0.54	-1.4
2,500,827	+		IAI47_11785	0.62	-0.5
2,500,827	+		IAI47_11785	0.62	-0.1
2,500,827	+		IAI47_11785	0.62	-0.8
2,500,827	+		IAI47_11785	0.62	-0.2
2,500,827	+		IAI47_11785	0.62	+1.1
2,500,827	+		IAI47_11785	0.62	+1.4
2,500,828	-		IAI47_11785	0.62	+0.8
2,500,828	-		IAI47_11785	0.62	-1.4
2,500,978	+		IAI47_11785	0.72	-0.8
2,501,161	+		IAI47_11785	0.84	-1.0
2,501,161	+		IAI47_11785	0.84	-2.4
2,501,161	+		IAI47_11785	0.84	-0.4
2,501,161	+		IAI47_11785	0.84	-1.2
2,501,162	-		IAI47_11785	0.84	-0.1
2,501,162	-		IAI47_11785	0.84	-0.0
2,501,162	-		IAI47_11785	0.84	+0.6
2,501,228	+		IAI47_11785	0.89	-0.8
2,501,228	+		IAI47_11785	0.89	-1.1
2,501,229	-		IAI47_11785	0.89	-0.4
2,501,292	-				-1.6
2,501,399	+				-0.3
2,501,399	+				-0.6
2,501,399	+				+0.4
2,501,400	-				+0.8
2,501,400	-				+0.7
2,501,400	-				-0.3
2,501,496	-		IAI47_11790	0.10	-0.0
2,501,496	-		IAI47_11790	0.10	+0.1
2,501,607	+		IAI47_11790	0.22	+1.2
2,501,652	+		IAI47_11790	0.27	-2.2
2,501,816	+		IAI47_11790	0.44	-1.1
2,501,862	+		IAI47_11790	0.49	-1.1
2,501,864	+		IAI47_11790	0.49	-0.0
2,501,864	+		IAI47_11790	0.49	+0.2
2,501,864	+		IAI47_11790	0.49	-0.1
2,501,864	+		IAI47_11790	0.49	+1.3
2,501,864	+		IAI47_11790	0.49	-0.3
2,501,864	+		IAI47_11790	0.49	+0.1
2,501,864	+		IAI47_11790	0.49	+0.8
2,501,865	-		IAI47_11790	0.49	+0.1
2,501,865	-		IAI47_11790	0.49	+0.6
2,501,865	-		IAI47_11790	0.49	+0.4
2,501,865	-		IAI47_11790	0.49	+1.9
2,501,865	-		IAI47_11790	0.49	-1.2
2,501,891	+		IAI47_11790	0.52	-1.7
2,501,892	-		IAI47_11790	0.52	+0.7
2,501,892	-		IAI47_11790	0.52	-0.5
2,501,892	-		IAI47_11790	0.52	+1.9
2,501,933	+		IAI47_11790	0.57	-1.6
2,501,933	+		IAI47_11790	0.57	+0.3
2,501,933	+		IAI47_11790	0.57	-1.0
2,501,933	+		IAI47_11790	0.57	+1.5
2,501,933	+		IAI47_11790	0.57	+0.5
2,501,933	+		IAI47_11790	0.57	-2.6
2,501,933	+		IAI47_11790	0.57	-1.2
2,501,933	+		IAI47_11790	0.57	+0.2
2,501,933	+		IAI47_11790	0.57	-1.4
2,501,934	-		IAI47_11790	0.57	-1.9
2,501,934	-		IAI47_11790	0.57	+1.3
2,501,934	-		IAI47_11790	0.57	-0.7
2,501,934	-		IAI47_11790	0.57	+0.0
2,502,008	+		IAI47_11790	0.65	-0.1
2,502,009	-		IAI47_11790	0.65	+0.8
2,502,056	+		IAI47_11790	0.70	+0.0
2,502,056	+		IAI47_11790	0.70	+1.3
2,502,057	-		IAI47_11790	0.70	+1.2
2,502,057	-		IAI47_11790	0.70	+0.0
2,502,115	-		IAI47_11790	0.76	+0.5
2,502,192	+		IAI47_11790	0.84	-0.4
2,502,192	+		IAI47_11790	0.84	-0.1
2,502,192	+		IAI47_11790	0.84	+0.6
2,502,193	-		IAI47_11790	0.84	+2.2
2,502,193	-		IAI47_11790	0.84	-1.4
2,502,193	-		IAI47_11790	0.84	-1.0
2,502,216	+		IAI47_11790	0.87	-0.4
2,502,216	+		IAI47_11790	0.87	-1.0
2,502,219	+		IAI47_11790	0.87	-2.2
2,502,219	+		IAI47_11790	0.87	+2.0
2,502,220	-		IAI47_11790	0.87	-1.4
2,502,220	-		IAI47_11790	0.87	+0.8
2,502,220	-		IAI47_11790	0.87	+1.1
2,502,220	-		IAI47_11790	0.87	-1.2
2,502,220	-		IAI47_11790	0.87	+0.1
2,502,220	-		IAI47_11790	0.87	+0.5
2,502,336	+				-0.1
2,502,336	+				+0.6
2,502,337	-				+1.8
2,502,337	-				-0.2
2,502,337	-				-1.2