Strain Fitness in Pantoea sp. MT58 around IAI47_09795

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,071,487	-		IAI47_09785	0.58	-1.5
2,071,611	+		IAI47_09785	0.67	+0.7
2,071,611	+		IAI47_09785	0.67	-0.9
2,071,612	-		IAI47_09785	0.67	+1.7
2,071,612	-		IAI47_09785	0.67	+1.3
2,071,612	-		IAI47_09785	0.67	+0.9
2,071,666	+		IAI47_09785	0.71	+1.9
2,071,666	+		IAI47_09785	0.71	-0.3
2,071,666	+		IAI47_09785	0.71	+0.7
2,071,667	-		IAI47_09785	0.71	-0.9
2,071,667	-		IAI47_09785	0.71	+0.3
2,071,675	+		IAI47_09785	0.71	+0.5
2,071,675	+		IAI47_09785	0.71	+1.2
2,071,695	+		IAI47_09785	0.73	-1.1
2,071,696	-		IAI47_09785	0.73	-0.9
2,071,696	-		IAI47_09785	0.73	+1.1
2,071,785	+		IAI47_09785	0.79	+1.3
2,071,870	+		IAI47_09785	0.85	-1.5
2,071,906	+		IAI47_09785	0.87	-0.9
2,071,906	+		IAI47_09785	0.87	+0.4
2,071,928	+		IAI47_09785	0.88	-0.5
2,071,929	-		IAI47_09785	0.89	-0.7
2,071,929	-		IAI47_09785	0.89	-0.8
2,071,929	-		IAI47_09785	0.89	+0.7
2,072,011	+				-0.2
2,072,011	+				+2.0
2,072,012	-				+0.7
2,072,094	+				-1.3
2,072,094	+				-1.8
2,072,095	-				-2.1
2,072,095	-				-0.9
2,072,138	-				-0.7
2,072,138	-				+1.7
2,072,210	+		IAI47_09790	0.25	-1.7
2,072,211	-		IAI47_09790	0.25	-0.5
2,072,212	+		IAI47_09790	0.26	-0.9
2,072,213	-		IAI47_09790	0.26	-1.3
2,072,213	-		IAI47_09790	0.26	-0.2
2,072,213	-		IAI47_09790	0.26	-0.6
2,072,213	-		IAI47_09790	0.26	+2.7
2,072,409	+				-0.2
2,072,413	-				+0.3
2,072,424	+				+1.1
2,072,425	-				-0.7
2,072,425	-				+0.7
2,072,425	-				-0.7
2,072,444	+				-2.1
2,072,444	+				+0.3
2,072,444	+				+2.0
2,072,444	+				-2.9
2,072,444	+				+0.3
2,072,444	+				-1.5
2,072,444	+				+1.3
2,072,445	-				+1.6
2,072,445	-				+0.1
2,072,445	-				+0.7
2,072,445	-				+1.5
2,072,445	-				+0.3
2,072,445	-				-1.9
2,072,445	-				+0.3
2,072,445	-				-0.6
2,072,450	-				+1.1
2,072,450	-				+0.2
2,072,450	-				-0.8
2,072,463	+				-0.6
2,072,463	+				-1.8
2,072,463	+				-0.3
2,072,463	+				+1.3
2,072,463	+				+0.3
2,072,464	-				-0.7
2,072,464	-				+0.3
2,072,464	-				-2.5
2,072,464	-				+1.3
2,072,466	+				-1.3
2,072,466	+				-2.0
2,072,466	+				+0.1
2,072,466	+				-0.8
2,072,466	+				-1.0
2,072,466	+				+1.7
2,072,466	+				-0.4
2,072,467	-				+1.7
2,072,467	-				-1.5
2,072,467	-				+0.6
2,072,467	-				+0.7
2,072,467	-				-0.8
2,072,468	+				+1.7
2,072,468	+				-0.7
2,072,468	+				-0.9
2,072,468	+				+0.5
2,072,469	-				+0.1
2,072,469	-				+3.0
2,072,469	-				-0.3
2,072,469	-				+1.5
2,072,469	-				+1.0
2,072,469	-				-0.8
2,072,469	-				-0.3
2,072,539	+		IAI47_09795	0.19	-0.5
2,072,540	-		IAI47_09795	0.19	+0.9
2,072,540	-		IAI47_09795	0.19	+2.1
2,072,552	+		IAI47_09795	0.23	-0.8
2,072,553	-		IAI47_09795	0.23	-0.4
2,072,553	-		IAI47_09795	0.23	-1.2
2,072,584	+		IAI47_09795	0.33	+2.3
2,072,585	-		IAI47_09795	0.33	+3.6
2,072,585	-		IAI47_09795	0.33	+1.5
2,072,585	-		IAI47_09795	0.33	+1.5
2,072,601	-		IAI47_09795	0.38	+1.2
2,072,637	-		IAI47_09795	0.49	+0.2
2,072,637	-		IAI47_09795	0.49	-2.0
2,072,669	+		IAI47_09795	0.59	+1.3
2,072,669	+		IAI47_09795	0.59	-0.1
2,072,670	-		IAI47_09795	0.59	+2.1
2,072,670	-		IAI47_09795	0.59	+0.7
2,072,670	-		IAI47_09795	0.59	-0.3
2,072,670	-		IAI47_09795	0.59	-1.7
2,072,807	+				-3.1
2,072,808	-				-0.1
2,072,814	+				+1.3
2,072,814	+				-1.8
2,072,815	-				-1.8
2,072,815	-				+1.7
2,072,818	+				+0.8
2,072,818	+				+1.6
2,072,819	-				+0.5
2,072,865	+				-1.7
2,072,866	-				-1.1
2,072,897	+				-0.6
2,072,897	+				+0.6
2,072,897	+				+1.9
2,072,934	-				-1.3
2,072,978	+				-0.2
2,073,005	-				+0.3
2,073,005	-				-0.4
2,073,007	+				+0.7
2,073,007	+				+0.7
2,073,007	+				+2.3
2,073,007	+				+2.4
2,073,008	-				-1.1
2,073,008	-				+0.9
2,073,009	+				+0.7
2,073,009	+				-0.2
2,073,009	+				+0.9
2,073,010	-				-1.3
2,073,010	-				+1.6
2,073,053	-				+0.8
2,073,068	+				-2.6
2,073,068	+				+2.9
2,073,069	-				-0.2
2,073,069	-				-0.7
2,073,080	+				-2.1
2,073,080	+				+1.5
2,073,081	-				+1.1
2,073,081	-				+0.7
2,073,101	+				+0.7
2,073,101	+				-1.3
2,073,101	+				+1.9
2,073,102	-				+1.4
2,073,146	-		IAI47_09800	0.22	-0.5
2,073,146	-		IAI47_09800	0.22	-0.5
2,073,146	-		IAI47_09800	0.22	+1.3
2,073,151	+		IAI47_09800	0.23	+1.7
2,073,179	-		IAI47_09800	0.32	-0.5
2,073,252	+		IAI47_09800	0.54	+0.4
2,073,252	+		IAI47_09800	0.54	+2.3
2,073,253	-		IAI47_09800	0.54	+1.6
2,073,253	-		IAI47_09800	0.54	+0.8
2,073,261	+		IAI47_09800	0.57	+0.2
2,073,273	+		IAI47_09800	0.61	+0.7
2,073,273	+		IAI47_09800	0.61	-0.5
2,073,273	+		IAI47_09800	0.61	+0.3
2,073,273	+		IAI47_09800	0.61	-1.0
2,073,273	+		IAI47_09800	0.61	-0.5
2,073,274	-		IAI47_09800	0.61	+1.2
2,073,274	-		IAI47_09800	0.61	-0.3
2,073,274	-		IAI47_09800	0.61	+1.7
2,073,274	-		IAI47_09800	0.61	-3.0
2,073,274	-		IAI47_09800	0.61	+0.7
2,073,304	+		IAI47_09800	0.70	-0.5
2,073,305	-		IAI47_09800	0.70	+0.6
2,073,434	+				+0.6
2,073,435	-				-0.4
2,073,435	-				-1.2
2,073,435	-				-2.3
2,073,441	+				+0.6
2,073,442	-				-0.5
2,073,442	-				-0.1
2,073,510	+		IAI47_09805	0.10	-1.3
2,073,510	+		IAI47_09805	0.10	-0.8
2,073,510	+		IAI47_09805	0.10	-0.5
2,073,511	-		IAI47_09805	0.10	+1.5
2,073,511	-		IAI47_09805	0.10	-0.4
2,073,511	-		IAI47_09805	0.10	-1.7
2,073,511	-		IAI47_09805	0.10	+0.7
2,073,559	+		IAI47_09805	0.17	-0.9
2,073,578	+		IAI47_09805	0.19	-0.9
2,073,579	-		IAI47_09805	0.20	+0.9
2,073,579	-		IAI47_09805	0.20	+1.7
2,073,579	-		IAI47_09805	0.20	-0.0
2,073,579	-		IAI47_09805	0.20	+0.1
2,073,579	-		IAI47_09805	0.20	+1.1
2,073,579	-		IAI47_09805	0.20	-1.0
2,073,579	-		IAI47_09805	0.20	+0.0
2,073,655	+		IAI47_09805	0.30	-1.1
2,073,655	+		IAI47_09805	0.30	-1.4
2,073,655	+		IAI47_09805	0.30	+1.0
2,073,655	+		IAI47_09805	0.30	+0.7
2,073,655	+		IAI47_09805	0.30	+0.3
2,073,655	+		IAI47_09805	0.30	-1.4
2,073,655	+		IAI47_09805	0.30	+0.4
2,073,655	+		IAI47_09805	0.30	+0.3
2,073,655	+		IAI47_09805	0.30	+2.0
2,073,656	-		IAI47_09805	0.30	-0.1
2,073,656	-		IAI47_09805	0.30	+1.0
2,073,656	-		IAI47_09805	0.30	+2.8
2,073,656	-		IAI47_09805	0.30	+0.8
2,073,656	-		IAI47_09805	0.30	-0.5
2,073,656	-		IAI47_09805	0.30	-0.4
2,073,658	-		IAI47_09805	0.30	-1.0
2,073,658	-		IAI47_09805	0.30	-0.5
2,073,678	+		IAI47_09805	0.33	-1.9
2,073,679	-		IAI47_09805	0.33	-0.5
2,073,679	-		IAI47_09805	0.33	+1.4
2,073,702	+		IAI47_09805	0.36	+0.4
2,073,703	-		IAI47_09805	0.36	-0.6
2,073,740	+		IAI47_09805	0.41	+2.1
2,073,740	+		IAI47_09805	0.41	-0.2
2,073,740	+		IAI47_09805	0.41	+1.0
2,073,740	+		IAI47_09805	0.41	-0.4
2,073,740	+		IAI47_09805	0.41	+1.1
2,073,740	+		IAI47_09805	0.41	-1.7
2,073,740	+		IAI47_09805	0.41	-1.3
2,073,741	-		IAI47_09805	0.41	-2.4
2,073,741	-		IAI47_09805	0.41	-2.3
2,073,741	-		IAI47_09805	0.41	+0.6
2,073,741	-		IAI47_09805	0.41	-0.0
2,073,741	-		IAI47_09805	0.41	-0.9
2,073,741	-		IAI47_09805	0.41	+0.3
2,073,741	-		IAI47_09805	0.41	-1.4
2,073,758	+		IAI47_09805	0.44	-1.0
2,073,758	+		IAI47_09805	0.44	+0.8
2,073,759	-		IAI47_09805	0.44	+0.1
2,073,769	-		IAI47_09805	0.45	-0.2