Strain Fitness in Pantoea sp. MT58 around IAI47_09740

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,059,558	+		IAI47_09735	0.76	+0.5
2,059,558	+		IAI47_09735	0.76	+1.4
2,059,558	+		IAI47_09735	0.76	+1.4
2,059,558	+		IAI47_09735	0.76	+1.3
2,059,558	+		IAI47_09735	0.76	-0.4
2,059,558	+		IAI47_09735	0.76	+0.3
2,059,558	+		IAI47_09735	0.76	+0.6
2,059,559	-		IAI47_09735	0.77	+0.7
2,059,559	-		IAI47_09735	0.77	+0.8
2,059,559	-		IAI47_09735	0.77	+0.6
2,059,559	-		IAI47_09735	0.77	-1.0
2,059,559	-		IAI47_09735	0.77	+1.0
2,059,559	-		IAI47_09735	0.77	-0.9
2,059,559	-		IAI47_09735	0.77	-0.1
2,059,559	-		IAI47_09735	0.77	+0.6
2,059,560	+		IAI47_09735	0.77	-2.3
2,059,560	+		IAI47_09735	0.77	-1.1
2,059,560	+		IAI47_09735	0.77	-0.9
2,059,561	-		IAI47_09735	0.77	+1.2
2,059,585	+		IAI47_09735	0.79	+1.5
2,059,585	+		IAI47_09735	0.79	+0.7
2,059,585	+		IAI47_09735	0.79	-0.7
2,059,586	-		IAI47_09735	0.79	-1.1
2,059,586	-		IAI47_09735	0.79	-0.3
2,059,586	-		IAI47_09735	0.79	+3.6
2,059,614	+		IAI47_09735	0.81	-1.4
2,059,615	-		IAI47_09735	0.81	+0.6
2,059,615	-		IAI47_09735	0.81	+0.2
2,059,615	-		IAI47_09735	0.81	+0.3
2,059,618	-		IAI47_09735	0.82	-0.0
2,059,618	-		IAI47_09735	0.82	+0.8
2,059,625	-		IAI47_09735	0.82	-1.1
2,059,667	+		IAI47_09735	0.86	-2.6
2,059,667	+		IAI47_09735	0.86	+1.3
2,059,667	+		IAI47_09735	0.86	+1.0
2,059,667	+		IAI47_09735	0.86	+1.5
2,059,667	+		IAI47_09735	0.86	+1.7
2,059,667	+		IAI47_09735	0.86	+0.0
2,059,667	+		IAI47_09735	0.86	+0.8
2,059,667	+		IAI47_09735	0.86	+0.5
2,059,667	+		IAI47_09735	0.86	+1.6
2,059,667	+		IAI47_09735	0.86	+0.7
2,059,667	+		IAI47_09735	0.86	+0.4
2,059,668	-		IAI47_09735	0.86	-1.9
2,059,668	-		IAI47_09735	0.86	+0.2
2,059,668	-		IAI47_09735	0.86	+0.1
2,059,668	-		IAI47_09735	0.86	-0.3
2,059,668	-		IAI47_09735	0.86	-1.4
2,059,668	-		IAI47_09735	0.86	-1.3
2,059,668	-		IAI47_09735	0.86	+0.3
2,059,668	-		IAI47_09735	0.86	+0.4
2,059,668	-		IAI47_09735	0.86	+0.6
2,059,668	-		IAI47_09735	0.86	-1.3
2,059,668	-		IAI47_09735	0.86	-2.6
2,059,668	-		IAI47_09735	0.86	-0.5
2,059,668	-		IAI47_09735	0.86	+1.1
2,059,671	+		IAI47_09735	0.86	-0.8
2,059,671	+		IAI47_09735	0.86	+0.3
2,059,671	+		IAI47_09735	0.86	+0.2
2,059,671	+		IAI47_09735	0.86	-0.9
2,059,671	+		IAI47_09735	0.86	+0.4
2,059,671	+		IAI47_09735	0.86	+0.6
2,059,671	+		IAI47_09735	0.86	-1.3
2,059,672	-		IAI47_09735	0.86	-1.1
2,059,672	-		IAI47_09735	0.86	-2.3
2,059,672	-		IAI47_09735	0.86	-1.1
2,059,672	-		IAI47_09735	0.86	+0.7
2,059,672	-		IAI47_09735	0.86	+1.1
2,059,672	-		IAI47_09735	0.86	-0.6
2,059,758	+				-0.8
2,059,779	+				-0.9
2,059,779	+				+0.8
2,059,780	-				-1.9
2,059,790	-				+0.5
2,059,790	-				-1.5
2,059,812	+				+0.5
2,059,812	+				-1.7
2,059,813	-				+1.3
2,059,813	-				+0.4
2,059,813	-				-2.6
2,059,813	-				-0.1
2,059,813	-				+1.0
2,059,813	-				-0.3
2,059,813	-				-0.5
2,059,920	+				+1.3
2,059,921	-				+2.3
2,059,925	+				+0.2
2,059,925	+				-0.0
2,059,925	+				-0.0
2,059,925	+				+0.5
2,059,925	+				+1.2
2,059,933	-				+0.6
2,059,933	-				-1.4
2,059,933	-				-0.8
2,059,954	+				+0.5
2,059,965	+				+0.1
2,059,966	-				+0.3
2,060,017	+				+1.1
2,060,055	-				+1.2
2,060,055	-				-0.5
2,060,059	+				-1.9
2,060,059	+				-1.3
2,060,059	+				-0.8
2,060,059	+				-0.4
2,060,059	+				+0.9
2,060,059	+				-2.6
2,060,060	-				+3.0
2,060,060	-				-1.4
2,060,060	-				-1.7
2,060,060	-				-1.9
2,060,110	-				+1.1
2,060,125	-				+0.1
2,060,213	+				+0.3
2,060,213	+				-2.5
2,060,213	+				+0.3
2,060,213	+				+0.2
2,060,214	-				+0.9
2,060,214	-				+1.0
2,060,214	-				+1.6
2,060,214	-				-0.1
2,060,214	-				-2.1
2,060,226	+				-1.1
2,060,227	-				-0.4
2,060,227	-				+0.2
2,060,229	+				-2.7
2,060,230	-				-2.3
2,060,248	+				-2.5
2,060,248	+				-0.0
2,060,290	+				-1.0
2,060,290	+				+0.2
2,060,338	+				-0.0
2,060,344	+				-0.5
2,060,344	+				-0.6
2,060,344	+				+0.9
2,060,345	-				-0.4
2,060,345	-				-1.9
2,060,345	-				-1.2
2,060,345	-				+0.4
2,060,345	-				-1.0
2,060,345	-				-0.0
2,060,345	-				+0.8
2,060,346	+				-0.9
2,060,346	+				+1.5
2,060,346	+				+0.3
2,060,347	-				+0.1
2,060,347	-				+1.7
2,060,347	-				-0.0
2,060,347	-				-0.4
2,060,347	-				-0.5
2,060,359	+				-2.9
2,060,360	-				+0.4
2,060,360	-				+2.7
2,060,367	+				-2.3
2,060,367	+				-1.8
2,060,367	+				-0.3
2,060,367	+				-0.3
2,060,367	+				+1.1
2,060,367	+				+0.8
2,060,368	-				-1.8
2,060,368	-				+1.1
2,060,368	-				+2.2
2,060,368	-				-1.6
2,060,370	+				-1.1
2,060,370	+				-0.6
2,060,371	-				-0.8
2,060,371	-				+0.7
2,060,371	-				+0.9
2,060,371	-				-1.1
2,060,373	+				-1.0
2,060,373	+				+0.1
2,060,374	-				+0.1
2,060,426	+				-1.1
2,060,427	-				-0.1
2,060,434	+				-0.1
2,060,435	-				-0.2
2,060,435	-				+0.4
2,060,443	+				-0.5
2,060,443	+				+1.9
2,060,444	-				+1.1
2,060,444	-				-2.1
2,060,445	+				+1.2
2,060,446	-				+1.6
2,060,552	+				+1.0
2,060,604	-				+2.2
2,060,604	-				-0.3
2,060,607	+				+0.6
2,060,607	+				+0.1
2,060,608	-				-1.3
2,060,608	-				-1.6
2,060,612	+				+0.7
2,060,612	+				+0.2
2,060,612	+				-1.6
2,060,612	+				+2.2
2,060,613	-				-0.0
2,060,613	-				+2.8
2,060,613	-				+2.3
2,060,613	-				-0.9
2,060,613	-				+0.7
2,060,613	-				+1.1
2,060,613	-				+1.8
2,060,633	+				+1.1
2,060,634	-				+0.2
2,060,658	-				-0.1
2,060,658	-				-0.6
2,060,680	+		IAI47_09740	0.11	+1.4
2,060,680	+		IAI47_09740	0.11	+0.4
2,060,680	+		IAI47_09740	0.11	-0.4
2,060,681	-		IAI47_09740	0.11	-1.6
2,060,681	-		IAI47_09740	0.11	+0.9
2,060,681	-		IAI47_09740	0.11	-0.9
2,060,681	-		IAI47_09740	0.11	+0.3
2,060,681	-		IAI47_09740	0.11	-2.1
2,060,683	+		IAI47_09740	0.11	-1.3
2,060,683	+		IAI47_09740	0.11	-0.6
2,060,683	+		IAI47_09740	0.11	+1.3
2,060,683	+		IAI47_09740	0.11	+1.0
2,060,684	-		IAI47_09740	0.11	+0.9
2,060,684	-		IAI47_09740	0.11	-1.6
2,060,684	-		IAI47_09740	0.11	+1.3
2,060,684	-		IAI47_09740	0.11	+0.9
2,060,695	+		IAI47_09740	0.12	-0.5
2,060,822	+		IAI47_09740	0.22	-0.6
2,060,822	+		IAI47_09740	0.22	-0.5
2,060,823	-		IAI47_09740	0.23	+0.5
2,060,823	-		IAI47_09740	0.23	-1.5
2,060,823	-		IAI47_09740	0.23	+2.0
2,060,847	+		IAI47_09740	0.24	+0.8
2,060,942	-		IAI47_09740	0.32	+4.5
2,060,997	+		IAI47_09740	0.36	+1.1
2,061,014	-		IAI47_09740	0.38	+1.1
2,061,104	+		IAI47_09740	0.45	+0.1
2,061,104	+		IAI47_09740	0.45	+1.0
2,061,104	+		IAI47_09740	0.45	-0.1
2,061,104	+		IAI47_09740	0.45	-0.2
2,061,105	-		IAI47_09740	0.45	-0.9
2,061,105	-		IAI47_09740	0.45	+0.9
2,061,105	-		IAI47_09740	0.45	+1.4
2,061,108	+		IAI47_09740	0.45	+0.1
2,061,108	+		IAI47_09740	0.45	-3.0
2,061,109	-		IAI47_09740	0.45	+0.3
2,061,109	-		IAI47_09740	0.45	-0.9
2,061,116	+		IAI47_09740	0.46	+2.8
2,061,207	+		IAI47_09740	0.53	-2.6
2,061,279	+		IAI47_09740	0.59	-0.8
2,061,287	+		IAI47_09740	0.60	-0.7
2,061,296	+		IAI47_09740	0.60	-0.8
2,061,296	+		IAI47_09740	0.60	-0.2
2,061,296	+		IAI47_09740	0.60	-0.2
2,061,298	+		IAI47_09740	0.61	+0.1
2,061,298	+		IAI47_09740	0.61	+0.9
2,061,298	+		IAI47_09740	0.61	-0.7
2,061,298	+		IAI47_09740	0.61	-1.0
2,061,298	+		IAI47_09740	0.61	-0.3
2,061,298	+		IAI47_09740	0.61	-1.8
2,061,298	+		IAI47_09740	0.61	-1.6
2,061,298	+		IAI47_09740	0.61	+1.6
2,061,298	+		IAI47_09740	0.61	-1.1
2,061,298	+		IAI47_09740	0.61	-0.3
2,061,298	+		IAI47_09740	0.61	-0.6
2,061,298	+		IAI47_09740	0.61	+1.4
2,061,298	+		IAI47_09740	0.61	-1.0
2,061,299	-		IAI47_09740	0.61	+1.8
2,061,299	-		IAI47_09740	0.61	-0.3
2,061,299	-		IAI47_09740	0.61	-0.7
2,061,299	-		IAI47_09740	0.61	+0.1
2,061,299	-		IAI47_09740	0.61	+0.2
2,061,299	-		IAI47_09740	0.61	+0.3
2,061,299	-		IAI47_09740	0.61	-0.5
2,061,299	-		IAI47_09740	0.61	+1.6
2,061,299	-		IAI47_09740	0.61	-1.0
2,061,299	-		IAI47_09740	0.61	-2.1
2,061,299	-		IAI47_09740	0.61	+2.5
2,061,299	-		IAI47_09740	0.61	-1.9
2,061,333	+		IAI47_09740	0.63	+1.7
2,061,333	+		IAI47_09740	0.63	-2.2
2,061,334	-		IAI47_09740	0.63	-1.8
2,061,334	-		IAI47_09740	0.63	-0.9
2,061,334	-		IAI47_09740	0.63	-1.1
2,061,334	-		IAI47_09740	0.63	+1.5
2,061,334	-		IAI47_09740	0.63	-2.3
2,061,334	-		IAI47_09740	0.63	-0.6
2,061,334	-		IAI47_09740	0.63	-0.1
2,061,334	-		IAI47_09740	0.63	-2.0
2,061,349	+		IAI47_09740	0.65	+0.4
2,061,349	+		IAI47_09740	0.65	-0.8
2,061,349	+		IAI47_09740	0.65	-1.5
2,061,349	+		IAI47_09740	0.65	-0.3
2,061,349	+		IAI47_09740	0.65	+1.5
2,061,350	-		IAI47_09740	0.65	-0.0
2,061,350	-		IAI47_09740	0.65	-1.9
2,061,450	-		IAI47_09740	0.73	-0.7
2,061,492	-		IAI47_09740	0.76	-0.7
2,061,492	-		IAI47_09740	0.76	-1.3
2,061,634	+		IAI47_09740	0.87	-2.3
2,061,634	+		IAI47_09740	0.87	+0.0
2,061,635	-		IAI47_09740	0.87	-1.3
2,061,635	-		IAI47_09740	0.87	+1.0
2,061,689	+				-1.0
2,061,690	-				+1.2
2,061,715	+				+0.5
2,061,716	-				+0.1
2,061,777	+				+4.1
2,061,777	+				+0.3
2,061,778	-				+1.4
2,061,828	+				+1.9
2,061,828	+				+1.7
2,061,828	+				-0.7
2,061,829	-				+0.3
2,061,829	-				-2.1
2,061,829	-				+1.7
2,061,829	-				+1.1
2,061,843	-				-1.5
2,061,914	+				+0.6
2,061,914	+				+0.7
2,061,914	+				+1.1
2,061,914	+				+1.9
2,061,914	+				+2.1
2,061,915	-				-3.0
2,061,915	-				+0.5
2,061,919	+				-0.5
2,061,920	-				-0.8
2,061,939	+				-2.6
2,061,970	+				-0.4
2,061,970	+				+0.5
2,061,971	-				-0.6
2,061,999	+		IAI47_09745	0.13	-1.0
2,061,999	+		IAI47_09745	0.13	-0.4
2,061,999	+		IAI47_09745	0.13	+0.2
2,061,999	+		IAI47_09745	0.13	+0.2
2,062,000	-		IAI47_09745	0.13	+0.5
2,062,000	-		IAI47_09745	0.13	+0.7
2,062,000	-		IAI47_09745	0.13	+2.1
2,062,000	-		IAI47_09745	0.13	-0.3
2,062,000	-		IAI47_09745	0.13	+1.5
2,062,032	+		IAI47_09745	0.16	-0.7
2,062,032	+		IAI47_09745	0.16	+0.8
2,062,032	+		IAI47_09745	0.16	+0.3
2,062,032	+		IAI47_09745	0.16	-1.3
2,062,033	-		IAI47_09745	0.16	+0.4
2,062,036	+		IAI47_09745	0.17	+1.3
2,062,036	+		IAI47_09745	0.17	-1.9
2,062,036	+		IAI47_09745	0.17	+0.1
2,062,036	+		IAI47_09745	0.17	-1.9
2,062,036	+		IAI47_09745	0.17	-0.0
2,062,036	+		IAI47_09745	0.17	-0.6
2,062,036	+		IAI47_09745	0.17	+1.6
2,062,083	+		IAI47_09745	0.22	-0.0
2,062,083	+		IAI47_09745	0.22	+0.9
2,062,083	+		IAI47_09745	0.22	-1.3
2,062,084	-		IAI47_09745	0.22	+0.5
2,062,084	-		IAI47_09745	0.22	-1.7
2,062,110	+		IAI47_09745	0.25	-1.3
2,062,110	+		IAI47_09745	0.25	+0.1
2,062,111	-		IAI47_09745	0.25	-1.9
2,062,170	+		IAI47_09745	0.32	-0.7
2,062,170	+		IAI47_09745	0.32	+2.1
2,062,170	+		IAI47_09745	0.32	+0.9
2,062,170	+		IAI47_09745	0.32	+0.4
2,062,170	+		IAI47_09745	0.32	-2.7
2,062,183	+		IAI47_09745	0.33	+0.5
2,062,201	+		IAI47_09745	0.35	+0.7
2,062,258	+		IAI47_09745	0.41	-1.6
2,062,258	+		IAI47_09745	0.41	+0.1
2,062,258	+		IAI47_09745	0.41	+1.1
2,062,258	+		IAI47_09745	0.41	-2.2
2,062,258	+		IAI47_09745	0.41	+1.1
2,062,258	+		IAI47_09745	0.41	+3.3
2,062,259	-		IAI47_09745	0.42	-0.9
2,062,259	-		IAI47_09745	0.42	-1.5
2,062,259	-		IAI47_09745	0.42	+1.3
2,062,259	-		IAI47_09745	0.42	+0.1
2,062,259	-		IAI47_09745	0.42	+0.3
2,062,259	-		IAI47_09745	0.42	-0.3
2,062,259	-		IAI47_09745	0.42	+0.2
2,062,259	-		IAI47_09745	0.42	+0.5
2,062,260	+		IAI47_09745	0.42	-1.1
2,062,260	+		IAI47_09745	0.42	-1.2
2,062,260	+		IAI47_09745	0.42	-0.6
2,062,260	+		IAI47_09745	0.42	-1.9
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2,062,339	+		IAI47_09745	0.51	+1.3
2,062,340	-		IAI47_09745	0.51	-3.5
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2,062,340	-		IAI47_09745	0.51	-2.3
2,062,340	-		IAI47_09745	0.51	-2.0
2,062,391	+		IAI47_09745	0.56	-1.4
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2,062,406	-		IAI47_09745	0.58	+0.8
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2,062,406	-		IAI47_09745	0.58	+0.4
2,062,406	-		IAI47_09745	0.58	+0.8
2,062,406	-		IAI47_09745	0.58	+0.3
2,062,406	-		IAI47_09745	0.58	-0.7
2,062,511	-		IAI47_09745	0.70	+0.7
2,062,532	+		IAI47_09745	0.72	+1.8
2,062,533	-		IAI47_09745	0.72	+0.1
2,062,547	+		IAI47_09745	0.74	+2.9
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2,062,548	-		IAI47_09745	0.74	+1.0
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2,062,550	-		IAI47_09745	0.74	+0.9
2,062,550	-		IAI47_09745	0.74	-1.2
2,062,728	+				-0.0
2,062,728	+				+0.1
2,062,729	-				-1.1
2,062,729	-				-0.3