Strain Fitness in Pantoea sp. MT58 around IAI47_07610

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,609,954	+				-0.7
1,609,955	-				+1.9
1,609,961	+				-0.3
1,609,961	+				-1.3
1,609,961	+				+0.1
1,609,961	+				-3.4
1,609,977	+				+0.1
1,609,977	+				-0.3
1,609,978	-				+0.3
1,609,978	-				-1.6
1,610,030	+				+1.4
1,610,172	+		IAI47_07605	0.21	+1.0
1,610,172	+		IAI47_07605	0.21	+0.5
1,610,172	+		IAI47_07605	0.21	+0.5
1,610,173	-		IAI47_07605	0.21	-1.1
1,610,173	-		IAI47_07605	0.21	+0.6
1,610,174	+		IAI47_07605	0.22	-0.0
1,610,174	+		IAI47_07605	0.22	+1.4
1,610,174	+		IAI47_07605	0.22	+0.1
1,610,175	-		IAI47_07605	0.22	-1.7
1,610,175	-		IAI47_07605	0.22	-0.2
1,610,262	-		IAI47_07605	0.31	+1.2
1,610,508	+		IAI47_07605	0.56	+0.0
1,610,508	+		IAI47_07605	0.56	+2.4
1,610,509	-		IAI47_07605	0.57	+1.7
1,610,520	+		IAI47_07605	0.58	-1.0
1,610,520	+		IAI47_07605	0.58	+0.6
1,610,521	-		IAI47_07605	0.58	+2.2
1,610,521	-		IAI47_07605	0.58	-1.4
1,610,591	+		IAI47_07605	0.65	+0.4
1,610,592	-		IAI47_07605	0.65	+1.2
1,610,613	+		IAI47_07605	0.67	-0.0
1,610,614	-		IAI47_07605	0.68	+0.5
1,610,614	-		IAI47_07605	0.68	+1.8
1,610,614	-		IAI47_07605	0.68	+0.4
1,610,614	-		IAI47_07605	0.68	+2.2
1,610,614	-		IAI47_07605	0.68	+0.7
1,610,724	+		IAI47_07605	0.79	+0.6
1,610,724	+		IAI47_07605	0.79	+0.1
1,610,724	+		IAI47_07605	0.79	+0.1
1,610,724	+		IAI47_07605	0.79	+0.6
1,610,725	-		IAI47_07605	0.79	+1.8
1,610,725	-		IAI47_07605	0.79	+1.9
1,610,725	-		IAI47_07605	0.79	+1.8
1,610,766	+		IAI47_07605	0.83	+2.5
1,610,767	-		IAI47_07605	0.83	-0.8
1,610,856	+				+0.1
1,610,856	+				+1.7
1,610,856	+				+0.6
1,610,856	+				-1.3
1,610,857	-				-1.1
1,610,857	-				-2.2
1,610,857	-				-1.9
1,610,900	+				-0.1
1,610,900	+				+0.0
1,610,926	+				+1.1
1,610,926	+				-1.4
1,610,927	-				+0.3
1,610,927	-				+1.6
1,611,019	-		IAI47_07610	0.12	-0.7
1,611,113	+		IAI47_07610	0.23	-0.9
1,611,113	+		IAI47_07610	0.23	-1.6
1,611,114	-		IAI47_07610	0.23	+0.5
1,611,140	-		IAI47_07610	0.26	+0.5
1,611,258	+		IAI47_07610	0.40	+2.2
1,611,375	-		IAI47_07610	0.53	-0.5
1,611,375	-		IAI47_07610	0.53	+0.3
1,611,424	+		IAI47_07610	0.59	-1.1
1,611,424	+		IAI47_07610	0.59	-2.0
1,611,424	+		IAI47_07610	0.59	-0.7
1,611,425	-		IAI47_07610	0.59	-0.4
1,611,425	-		IAI47_07610	0.59	-0.3
1,611,434	+		IAI47_07610	0.60	+1.3
1,611,434	+		IAI47_07610	0.60	-0.7
1,611,434	+		IAI47_07610	0.60	+0.3
1,611,435	-		IAI47_07610	0.60	+0.7
1,611,435	-		IAI47_07610	0.60	-0.3
1,611,435	-		IAI47_07610	0.60	-0.5
1,611,435	-		IAI47_07610	0.60	+1.5
1,611,473	+		IAI47_07610	0.65	+2.2
1,611,473	+		IAI47_07610	0.65	+0.7
1,611,473	+		IAI47_07610	0.65	-1.9
1,611,473	+		IAI47_07610	0.65	-0.1
1,611,473	+		IAI47_07610	0.65	-2.6
1,611,473	+		IAI47_07610	0.65	+0.8
1,611,474	-		IAI47_07610	0.65	-0.7
1,611,474	-		IAI47_07610	0.65	-0.3
1,611,474	-		IAI47_07610	0.65	-1.2
1,611,474	-		IAI47_07610	0.65	+0.5
1,611,475	+		IAI47_07610	0.65	+0.0
1,611,475	+		IAI47_07610	0.65	+0.4
1,611,475	+		IAI47_07610	0.65	-0.1
1,611,476	-		IAI47_07610	0.65	-2.2
1,611,500	-		IAI47_07610	0.68	-1.5
1,611,500	-		IAI47_07610	0.68	+0.6
1,611,545	+		IAI47_07610	0.73	-1.1
1,611,545	+		IAI47_07610	0.73	-0.9
1,611,545	+		IAI47_07610	0.73	-2.2
1,611,546	-		IAI47_07610	0.73	-1.1
1,611,546	-		IAI47_07610	0.73	-0.6
1,611,546	-		IAI47_07610	0.73	+0.3
1,611,546	-		IAI47_07610	0.73	+1.4
1,611,547	+		IAI47_07610	0.73	-0.0
1,611,602	+		IAI47_07610	0.80	-0.2
1,611,603	-		IAI47_07610	0.80	+0.1
1,611,603	-		IAI47_07610	0.80	-0.8
1,611,634	+		IAI47_07610	0.84	-3.2
1,611,634	+		IAI47_07610	0.84	-1.7
1,611,635	-		IAI47_07610	0.84	-0.4
1,611,645	+		IAI47_07610	0.85	+0.3
1,611,645	+		IAI47_07610	0.85	+0.7
1,611,786	+				-1.2
1,611,786	+				+0.6
1,611,787	-				-0.7
1,611,787	-				-1.7
1,611,787	-				+0.4
1,611,787	-				-0.6
1,611,787	-				-2.2
1,611,804	-				+0.2
1,611,804	-				+0.0
1,611,880	-				-0.1
1,611,911	+				+0.3
1,611,930	+				-2.1
1,611,930	+				+0.6
1,611,931	-				+0.5
1,611,961	+		IAI47_07615	0.12	+0.5
1,611,961	+		IAI47_07615	0.12	+0.3
1,611,962	-		IAI47_07615	0.12	+0.7
1,611,962	-		IAI47_07615	0.12	+0.3
1,611,962	-		IAI47_07615	0.12	+1.2
1,612,020	+		IAI47_07615	0.15	-0.1
1,612,021	-		IAI47_07615	0.15	+0.4
1,612,021	-		IAI47_07615	0.15	-2.0
1,612,043	+		IAI47_07615	0.16	+1.2
1,612,043	+		IAI47_07615	0.16	-1.8
1,612,043	+		IAI47_07615	0.16	+1.1
1,612,044	-		IAI47_07615	0.17	-0.8
1,612,072	+		IAI47_07615	0.18	+0.4
1,612,072	+		IAI47_07615	0.18	+0.5
1,612,072	+		IAI47_07615	0.18	+1.2
1,612,073	-		IAI47_07615	0.18	+0.5
1,612,075	-				-1.3
1,612,102	-		IAI47_07615	0.20	+1.4
1,612,142	+		IAI47_07615	0.22	+2.7
1,612,142	+		IAI47_07615	0.22	+1.0
1,612,146	+		IAI47_07615	0.23	+1.0
1,612,146	+		IAI47_07615	0.23	-0.4
1,612,147	-		IAI47_07615	0.23	+0.2
1,612,147	-		IAI47_07615	0.23	-0.2
1,612,190	+		IAI47_07615	0.25	+0.2
1,612,190	+		IAI47_07615	0.25	+0.3
1,612,190	+		IAI47_07615	0.25	+0.6
1,612,191	-		IAI47_07615	0.25	+1.8
1,612,191	-		IAI47_07615	0.25	-1.3
1,612,232	+		IAI47_07615	0.28	-1.0
1,612,256	+		IAI47_07615	0.29	+1.3
1,612,271	+		IAI47_07615	0.30	-0.7
1,612,271	+		IAI47_07615	0.30	+0.7
1,612,272	-		IAI47_07615	0.30	-0.1
1,612,272	-		IAI47_07615	0.30	+0.8
1,612,272	-		IAI47_07615	0.30	-1.7
1,612,272	-		IAI47_07615	0.30	+0.6
1,612,272	-		IAI47_07615	0.30	-0.5
1,612,272	-		IAI47_07615	0.30	-1.8
1,612,272	-		IAI47_07615	0.30	+1.5
1,612,272	-		IAI47_07615	0.30	+1.3
1,612,272	-		IAI47_07615	0.30	+1.3
1,612,272	-		IAI47_07615	0.30	+2.1
1,612,420	+		IAI47_07615	0.39	-1.5
1,612,420	+		IAI47_07615	0.39	-0.8
1,612,420	+		IAI47_07615	0.39	+0.7
1,612,420	+		IAI47_07615	0.39	+1.7
1,612,421	-		IAI47_07615	0.39	+0.0
1,612,421	-		IAI47_07615	0.39	+0.0
1,612,498	+		IAI47_07615	0.44	-2.7
1,612,498	+		IAI47_07615	0.44	+0.8
1,612,499	-		IAI47_07615	0.44	+0.0
1,612,499	-		IAI47_07615	0.44	-0.3
1,612,540	+		IAI47_07615	0.46	-1.6
1,612,541	-		IAI47_07615	0.46	-0.7
1,612,550	+		IAI47_07615	0.47	+0.0
1,612,550	+		IAI47_07615	0.47	+0.8
1,612,551	-		IAI47_07615	0.47	+0.1
1,612,740	+		IAI47_07615	0.58	+1.7