Strain Fitness in Pantoea sp. MT58 around IAI47_17260

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,657,359	+		IAI47_17250	0.75	+0.4
3,657,359	+		IAI47_17250	0.75	+0.6
3,657,359	+		IAI47_17250	0.75	+4.0
3,657,359	+		IAI47_17250	0.75	-0.8
3,657,359	+		IAI47_17250	0.75	+2.3
3,657,360	-		IAI47_17250	0.75	+0.4
3,657,360	-		IAI47_17250	0.75	+2.1
3,657,416	+		IAI47_17250	0.80	+1.7
3,657,416	+		IAI47_17250	0.80	+1.1
3,657,416	+		IAI47_17250	0.80	-1.8
3,657,416	+		IAI47_17250	0.80	-0.2
3,657,416	+		IAI47_17250	0.80	-1.0
3,657,416	+		IAI47_17250	0.80	-0.8
3,657,416	+		IAI47_17250	0.80	+1.2
3,657,416	+		IAI47_17250	0.80	-0.5
3,657,416	+		IAI47_17250	0.80	+1.4
3,657,416	+		IAI47_17250	0.80	+1.6
3,657,416	+		IAI47_17250	0.80	+2.5
3,657,417	-		IAI47_17250	0.80	-0.6
3,657,417	-		IAI47_17250	0.80	+0.5
3,657,417	-		IAI47_17250	0.80	-0.3
3,657,417	-		IAI47_17250	0.80	-0.4
3,657,417	-		IAI47_17250	0.80	+1.8
3,657,417	-		IAI47_17250	0.80	-1.4
3,657,417	-		IAI47_17250	0.80	-0.9
3,657,417	-		IAI47_17250	0.80	+0.9
3,657,417	-		IAI47_17250	0.80	-1.0
3,657,417	-		IAI47_17250	0.80	-1.5
3,657,417	-		IAI47_17250	0.80	+0.9
3,657,417	-		IAI47_17250	0.80	-1.9
3,657,417	-		IAI47_17250	0.80	+0.4
3,657,417	-		IAI47_17250	0.80	-1.0
3,657,417	-		IAI47_17250	0.80	-0.7
3,657,417	-		IAI47_17250	0.80	+0.7
3,657,418	+		IAI47_17250	0.80	-0.3
3,657,418	+		IAI47_17250	0.80	+2.2
3,657,418	+		IAI47_17250	0.80	-1.2
3,657,418	+		IAI47_17250	0.80	-1.8
3,657,418	+		IAI47_17250	0.80	-1.4
3,657,418	+		IAI47_17250	0.80	+1.1
3,657,418	+		IAI47_17250	0.80	+2.0
3,657,418	+		IAI47_17250	0.80	+0.2
3,657,418	+		IAI47_17250	0.80	-1.5
3,657,418	+		IAI47_17250	0.80	-0.7
3,657,418	+		IAI47_17250	0.80	+2.1
3,657,418	+		IAI47_17250	0.80	+1.6
3,657,419	-		IAI47_17250	0.80	+1.5
3,657,419	-		IAI47_17250	0.80	-0.3
3,657,419	-		IAI47_17250	0.80	-0.1
3,657,419	-		IAI47_17250	0.80	-0.9
3,657,419	-		IAI47_17250	0.80	+2.0
3,657,419	-		IAI47_17250	0.80	+0.0
3,657,419	-		IAI47_17250	0.80	-2.5
3,657,429	+		IAI47_17250	0.81	+2.7
3,657,429	+		IAI47_17250	0.81	-1.4
3,657,430	-		IAI47_17250	0.81	+0.6
3,657,557	+				+1.0
3,657,558	-				+0.7
3,657,573	+				-0.1
3,657,573	+				-1.8
3,657,573	+				-0.5
3,657,573	+				+0.0
3,657,573	+				-0.5
3,657,573	+				+1.5
3,657,573	+				+0.9
3,657,573	+				+0.9
3,657,574	-				+1.9
3,657,574	-				+0.2
3,657,616	+				-0.5
3,657,617	-				+0.1
3,657,680	+				-0.2
3,657,680	+				+1.4
3,657,681	-				+0.2
3,657,709	+				-1.2
3,657,709	+				-1.2
3,657,709	+				-0.6
3,657,709	+				-0.5
3,657,710	-				+1.9
3,657,710	-				+0.2
3,657,710	-				-1.6
3,657,710	-				+1.2
3,657,710	-				+0.7
3,657,714	+				-1.0
3,657,714	+				+0.5
3,657,714	+				+0.5
3,657,714	+				+1.0
3,657,714	+				+1.2
3,657,714	+				+0.0
3,657,714	+				+1.5
3,657,715	-				+0.8
3,657,715	-				-1.4
3,657,715	-				-2.3
3,657,715	-				-1.9
3,657,715	-				-1.9
3,657,745	+				-0.9
3,657,745	+				+3.6
3,657,745	+				+0.2
3,657,758	+				+1.8
3,657,758	+				+0.7
3,657,760	+				+1.1
3,657,760	+				+3.5
3,657,760	+				-1.3
3,657,760	+				-1.6
3,657,760	+				-1.7
3,657,760	+				+1.3
3,657,761	-				-1.5
3,657,761	-				-0.9
3,657,761	-				-2.2
3,657,761	-				-0.2
3,657,761	-				-2.1
3,657,761	-				+1.4
3,657,761	-				-2.6
3,657,761	-				-2.2
3,657,767	+				-0.6
3,657,767	+				-1.6
3,657,767	+				+1.4
3,657,767	+				+0.5
3,657,791	+				+1.2
3,657,791	+				+0.9
3,658,112	-		IAI47_17255	0.72	-1.7
3,658,171	+		IAI47_17255	0.87	-3.9
3,658,172	-		IAI47_17255	0.87	+0.4
3,658,172	-		IAI47_17255	0.87	-2.5
3,658,222	+				-1.6
3,658,223	-				+1.2
3,658,297	+				+2.2
3,658,297	+				-2.2
3,658,298	-				+1.6
3,658,298	-				+1.0
3,658,330	+				+1.8
3,658,330	+				+1.3
3,658,330	+				+1.0
3,658,330	+				-1.5
3,658,331	-				+0.9
3,658,331	-				+0.2
3,658,331	-				+1.9
3,658,331	-				+1.0
3,658,331	-				+1.3
3,658,358	+				-2.4
3,658,367	-				-0.7
3,658,367	-				-2.4
3,658,377	-				+1.8
3,658,539	-		IAI47_17260	0.15	+0.9
3,658,539	-		IAI47_17260	0.15	-2.1
3,658,553	+		IAI47_17260	0.16	+1.7
3,658,586	+		IAI47_17260	0.18	-0.8
3,658,628	+		IAI47_17260	0.21	+0.2
3,658,628	+		IAI47_17260	0.21	-1.6
3,658,628	+		IAI47_17260	0.21	+2.1
3,658,629	-		IAI47_17260	0.21	+0.4
3,658,629	-		IAI47_17260	0.21	+1.8
3,658,629	-		IAI47_17260	0.21	-1.2
3,658,629	-		IAI47_17260	0.21	+1.2
3,658,647	+		IAI47_17260	0.23	-0.2
3,658,648	-		IAI47_17260	0.23	+2.2
3,658,648	-		IAI47_17260	0.23	+0.4
3,658,651	+		IAI47_17260	0.23	+0.0
3,658,651	+		IAI47_17260	0.23	+1.9
3,658,651	+		IAI47_17260	0.23	+1.6
3,658,651	+		IAI47_17260	0.23	-0.8
3,658,652	-		IAI47_17260	0.23	-0.1
3,658,652	-		IAI47_17260	0.23	-1.1
3,658,652	-		IAI47_17260	0.23	+0.6
3,658,685	+		IAI47_17260	0.25	+3.7
3,658,685	+		IAI47_17260	0.25	+2.8
3,658,685	+		IAI47_17260	0.25	+1.5
3,658,685	+		IAI47_17260	0.25	+1.7
3,658,686	-		IAI47_17260	0.26	-0.4
3,658,696	+		IAI47_17260	0.26	+2.0
3,658,696	+		IAI47_17260	0.26	-1.4
3,658,696	+		IAI47_17260	0.26	+1.8
3,658,697	-		IAI47_17260	0.26	+0.4
3,658,697	-		IAI47_17260	0.26	-0.3
3,658,719	+		IAI47_17260	0.28	+0.6
3,658,720	-		IAI47_17260	0.28	+0.1
3,658,720	-		IAI47_17260	0.28	+0.7
3,658,720	-		IAI47_17260	0.28	-1.3
3,658,720	-		IAI47_17260	0.28	+1.2
3,658,720	-		IAI47_17260	0.28	-0.3
3,658,720	-		IAI47_17260	0.28	-0.0
3,658,720	-		IAI47_17260	0.28	+0.4
3,658,793	+		IAI47_17260	0.33	+2.0
3,658,793	+		IAI47_17260	0.33	+2.6
3,658,896	-		IAI47_17260	0.41	-1.0
3,658,946	+		IAI47_17260	0.44	+0.7
3,658,947	-		IAI47_17260	0.45	-0.4
3,658,947	-		IAI47_17260	0.45	+0.1
3,658,976	+		IAI47_17260	0.47	-3.0
3,659,022	-		IAI47_17260	0.50	+1.2
3,659,087	+		IAI47_17260	0.55	-2.3
3,659,087	+		IAI47_17260	0.55	-1.4
3,659,087	+		IAI47_17260	0.55	-0.8
3,659,087	+		IAI47_17260	0.55	+1.8
3,659,087	+		IAI47_17260	0.55	+2.6
3,659,150	+		IAI47_17260	0.59	-1.1
3,659,153	+		IAI47_17260	0.60	-0.1
3,659,153	+		IAI47_17260	0.60	+2.0
3,659,153	+		IAI47_17260	0.60	+0.6
3,659,154	-		IAI47_17260	0.60	-0.2
3,659,154	-		IAI47_17260	0.60	-1.9
3,659,184	-		IAI47_17260	0.62	-0.1
3,659,192	+		IAI47_17260	0.62	+1.7
3,659,192	+		IAI47_17260	0.62	+0.1
3,659,192	+		IAI47_17260	0.62	-1.1
3,659,192	+		IAI47_17260	0.62	+0.6
3,659,193	-		IAI47_17260	0.62	-0.4
3,659,233	+		IAI47_17260	0.65	+0.3
3,659,276	+		IAI47_17260	0.68	+0.3
3,659,277	-		IAI47_17260	0.69	+1.8
3,659,277	-		IAI47_17260	0.69	-1.4
3,659,279	+		IAI47_17260	0.69	-1.6
3,659,279	+		IAI47_17260	0.69	-1.2
3,659,279	+		IAI47_17260	0.69	+0.6
3,659,279	+		IAI47_17260	0.69	+3.4
3,659,279	+		IAI47_17260	0.69	+2.3
3,659,280	-		IAI47_17260	0.69	-1.8
3,659,280	-		IAI47_17260	0.69	-0.8
3,659,280	-		IAI47_17260	0.69	+1.4
3,659,280	-		IAI47_17260	0.69	+0.5
3,659,280	-		IAI47_17260	0.69	-1.7
3,659,280	-		IAI47_17260	0.69	-0.7
3,659,282	+		IAI47_17260	0.69	-2.5
3,659,282	+		IAI47_17260	0.69	+1.4
3,659,282	+		IAI47_17260	0.69	+0.9
3,659,282	+		IAI47_17260	0.69	+1.3
3,659,282	+		IAI47_17260	0.69	+2.1
3,659,283	-		IAI47_17260	0.69	+3.7
3,659,283	-		IAI47_17260	0.69	+0.2
3,659,283	-		IAI47_17260	0.69	-1.2
3,659,283	-		IAI47_17260	0.69	+0.9
3,659,283	-		IAI47_17260	0.69	-0.7
3,659,283	-		IAI47_17260	0.69	+1.5
3,659,297	+		IAI47_17260	0.70	-0.8
3,659,307	-		IAI47_17260	0.71	+2.7
3,659,329	+		IAI47_17260	0.72	+1.2
3,659,395	+		IAI47_17260	0.77	+1.7
3,659,507	+		IAI47_17260	0.85	+3.4
3,659,627	+				-1.6
3,659,632	+				+0.6
3,659,632	+				+0.0
3,659,632	+				-0.4
3,659,633	-				-1.4
3,659,633	-				-1.8
3,659,633	-				+0.7
3,659,668	+				+0.1
3,659,668	+				+2.3
3,659,668	+				-0.0
3,659,669	-				+3.0
3,659,669	-				-0.2
3,659,669	-				+0.6
3,659,687	+				-1.2
3,659,687	+				+1.3
3,659,687	+				+1.4
3,659,687	+				+1.0
3,659,687	+				-0.0
3,659,687	+				-2.6
3,659,687	+				-0.9
3,659,687	+				+1.8
3,659,687	+				+0.7
3,659,687	+				-1.9
3,659,687	+				+0.6
3,659,688	-				+0.9
3,659,688	-				-1.2
3,659,688	-				+0.6
3,659,688	-				-0.8
3,659,688	-				-1.7
3,659,688	-				-0.8
3,659,688	-				+0.3
3,659,688	-				-0.8
3,659,688	-				+1.2
3,659,688	-				-2.8
3,659,688	-				-0.4
3,659,688	-				-0.2
3,659,691	+				+0.8
3,659,691	+				+3.7
3,659,691	+				-1.9
3,659,691	+				-1.3
3,659,691	+				+1.1
3,659,691	+				+1.6
3,659,692	-				-1.1
3,659,692	-				-2.3
3,659,692	-				+0.6
3,659,692	-				-0.4
3,659,692	-				-3.2
3,659,692	-				+0.1
3,659,707	-				-1.1
3,659,718	+				+0.1
3,659,759	+				+1.2
3,659,759	+				+1.8
3,659,759	+				+0.6
3,659,759	+				-0.4
3,659,759	+				+0.3
3,659,759	+				-1.8
3,659,759	+				+2.2
3,659,759	+				-0.8
3,659,759	+				+1.4
3,659,759	+				-1.4
3,659,759	+				-0.5
3,659,791	+				-1.6