Strain Fitness in Pantoea sp. MT58 around IAI47_16585

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,515,096	+		IAI47_16580	0.24	-2.3
3,515,097	-		IAI47_16580	0.24	+0.7
3,515,097	-		IAI47_16580	0.24	+0.0
3,515,097	-		IAI47_16580	0.24	+0.8
3,515,097	-		IAI47_16580	0.24	-0.0
3,515,113	+		IAI47_16580	0.26	+1.4
3,515,113	+		IAI47_16580	0.26	-0.2
3,515,119	+		IAI47_16580	0.26	+2.7
3,515,120	-		IAI47_16580	0.26	+1.1
3,515,185	+		IAI47_16580	0.31	+0.5
3,515,186	-		IAI47_16580	0.31	-1.1
3,515,186	-		IAI47_16580	0.31	-0.3
3,515,186	-		IAI47_16580	0.31	-0.6
3,515,191	+		IAI47_16580	0.32	-0.7
3,515,192	-		IAI47_16580	0.32	+0.1
3,515,192	-		IAI47_16580	0.32	+1.3
3,515,337	+		IAI47_16580	0.43	+0.8
3,515,337	+		IAI47_16580	0.43	+1.1
3,515,337	+		IAI47_16580	0.43	+0.8
3,515,337	+				-0.8
3,515,337	+		IAI47_16580	0.43	-1.6
3,515,337	+		IAI47_16580	0.43	-0.6
3,515,338	-		IAI47_16580	0.43	-0.8
3,515,338	-		IAI47_16580	0.43	-1.4
3,515,347	+		IAI47_16580	0.43	+0.5
3,515,347	+		IAI47_16580	0.43	-1.3
3,515,347	+		IAI47_16580	0.43	+0.5
3,515,347	+		IAI47_16580	0.43	+1.1
3,515,347	+		IAI47_16580	0.43	+0.8
3,515,347	+		IAI47_16580	0.43	+1.7
3,515,347	+		IAI47_16580	0.43	-0.4
3,515,347	+		IAI47_16580	0.43	-0.8
3,515,347	+		IAI47_16580	0.43	+0.7
3,515,347	+		IAI47_16580	0.43	+0.8
3,515,347	+		IAI47_16580	0.43	-2.0
3,515,347	+		IAI47_16580	0.43	-0.4
3,515,348	-		IAI47_16580	0.44	+0.2
3,515,348	-		IAI47_16580	0.44	-0.4
3,515,348	-		IAI47_16580	0.44	-2.2
3,515,348	-		IAI47_16580	0.44	-2.4
3,515,348	-		IAI47_16580	0.44	+1.4
3,515,348	-		IAI47_16580	0.44	-0.5
3,515,348	-		IAI47_16580	0.44	-1.8
3,515,348	-		IAI47_16580	0.44	-0.5
3,515,348	-		IAI47_16580	0.44	-1.0
3,515,348	-		IAI47_16580	0.44	-0.8
3,515,348	-		IAI47_16580	0.44	+2.2
3,515,348	-		IAI47_16580	0.44	+0.2
3,515,348	-		IAI47_16580	0.44	+0.0
3,515,348	-		IAI47_16580	0.44	+0.4
3,515,404	+		IAI47_16580	0.48	+1.1
3,515,404	+		IAI47_16580	0.48	-0.1
3,515,404	+		IAI47_16580	0.48	+1.6
3,515,405	-		IAI47_16580	0.48	-0.5
3,515,424	-		IAI47_16580	0.49	+0.9
3,515,424	-		IAI47_16580	0.49	+1.3
3,515,424	-		IAI47_16580	0.49	-0.6
3,515,431	+		IAI47_16580	0.50	+1.1
3,515,431	+		IAI47_16580	0.50	+1.0
3,515,438	+		IAI47_16580	0.50	-0.4
3,515,438	+		IAI47_16580	0.50	-1.8
3,515,439	-		IAI47_16580	0.50	-0.6
3,515,441	+		IAI47_16580	0.51	-2.5
3,515,441	+		IAI47_16580	0.51	+0.3
3,515,441	+		IAI47_16580	0.51	-0.1
3,515,441	+		IAI47_16580	0.51	-0.1
3,515,441	+		IAI47_16580	0.51	+1.4
3,515,441	+		IAI47_16580	0.51	-1.6
3,515,442	-		IAI47_16580	0.51	-1.3
3,515,442	-		IAI47_16580	0.51	+3.1
3,515,442	-		IAI47_16580	0.51	+0.6
3,515,442	-		IAI47_16580	0.51	+3.1
3,515,442	-		IAI47_16580	0.51	-1.4
3,515,442	-		IAI47_16580	0.51	-0.8
3,515,442	-		IAI47_16580	0.51	-2.7
3,515,442	-		IAI47_16580	0.51	+1.0
3,515,444	+		IAI47_16580	0.51	-2.4
3,515,444	+		IAI47_16580	0.51	+2.2
3,515,444	+		IAI47_16580	0.51	-1.7
3,515,444	+		IAI47_16580	0.51	+0.7
3,515,444	+		IAI47_16580	0.51	+1.2
3,515,444	+		IAI47_16580	0.51	-1.0
3,515,444	+		IAI47_16580	0.51	+1.4
3,515,445	-		IAI47_16580	0.51	+2.2
3,515,445	-		IAI47_16580	0.51	+0.5
3,515,445	-		IAI47_16580	0.51	+1.9
3,515,445	-		IAI47_16580	0.51	-1.8
3,515,445	-		IAI47_16580	0.51	-0.4
3,515,495	+		IAI47_16580	0.55	-0.6
3,515,496	-		IAI47_16580	0.55	-0.5
3,515,524	-		IAI47_16580	0.57	-0.8
3,515,573	+		IAI47_16580	0.61	-1.7
3,515,574	-		IAI47_16580	0.61	-0.5
3,515,630	+		IAI47_16580	0.65	-2.2
3,515,630	+		IAI47_16580	0.65	-2.0
3,515,630	+		IAI47_16580	0.65	+2.3
3,515,630	+		IAI47_16580	0.65	+1.3
3,515,630	+		IAI47_16580	0.65	+0.9
3,515,630	+		IAI47_16580	0.65	-2.5
3,515,630	+		IAI47_16580	0.65	+2.2
3,515,630	+		IAI47_16580	0.65	-1.6
3,515,630	+		IAI47_16580	0.65	+1.6
3,515,630	+		IAI47_16580	0.65	+0.5
3,515,630	+		IAI47_16580	0.65	+1.9
3,515,630	+		IAI47_16580	0.65	-0.5
3,515,630	+		IAI47_16580	0.65	-0.0
3,515,630	+		IAI47_16580	0.65	+1.5
3,515,630	+		IAI47_16580	0.65	-0.7
3,515,630	+		IAI47_16580	0.65	-0.0
3,515,630	+		IAI47_16580	0.65	+2.8
3,515,630	+		IAI47_16580	0.65	+1.0
3,515,630	+		IAI47_16580	0.65	-1.0
3,515,630	+		IAI47_16580	0.65	+1.5
3,515,630	+		IAI47_16580	0.65	-1.6
3,515,631	-		IAI47_16580	0.65	+0.9
3,515,631	-		IAI47_16580	0.65	-1.2
3,515,631	-		IAI47_16580	0.65	-1.2
3,515,631	-		IAI47_16580	0.65	-0.4
3,515,631	-		IAI47_16580	0.65	-2.7
3,515,631	-		IAI47_16580	0.65	-2.0
3,515,631	-		IAI47_16580	0.65	+0.4
3,515,631	-		IAI47_16580	0.65	-2.7
3,515,631	-		IAI47_16580	0.65	+0.0
3,515,631	-		IAI47_16580	0.65	-0.2
3,515,631	-		IAI47_16580	0.65	-0.6
3,515,632	+		IAI47_16580	0.65	+0.6
3,515,632	+		IAI47_16580	0.65	-2.5
3,515,632	+		IAI47_16580	0.65	-2.4
3,515,632	+		IAI47_16580	0.65	-0.1
3,515,632	+		IAI47_16580	0.65	+1.3
3,515,632	+		IAI47_16580	0.65	-1.6
3,515,633	-		IAI47_16580	0.65	+2.0
3,515,633	-		IAI47_16580	0.65	+2.0
3,515,633	-		IAI47_16580	0.65	-0.8
3,515,633	-		IAI47_16580	0.65	+0.4
3,515,634	+		IAI47_16580	0.65	+1.7
3,515,634	+		IAI47_16580	0.65	-1.1
3,515,634	+		IAI47_16580	0.65	-1.2
3,515,634	+		IAI47_16580	0.65	+0.6
3,515,634	+		IAI47_16580	0.65	-1.6
3,515,634	+		IAI47_16580	0.65	+0.2
3,515,634	-		IAI47_16580	0.65	+3.0
3,515,635	-		IAI47_16580	0.65	-1.6
3,515,635	-		IAI47_16580	0.65	+0.8
3,515,635	-		IAI47_16580	0.65	+1.1
3,515,635	-		IAI47_16580	0.65	+1.2
3,515,635	-		IAI47_16580	0.65	+0.6
3,515,635	-		IAI47_16580	0.65	-0.1
3,515,635	-		IAI47_16580	0.65	+0.4
3,515,635	-		IAI47_16580	0.65	-1.8
3,515,635	-		IAI47_16580	0.65	-0.1
3,515,635	-		IAI47_16580	0.65	-1.7
3,515,635	-		IAI47_16580	0.65	-0.5
3,515,635	-		IAI47_16580	0.65	-1.2
3,515,669	+		IAI47_16580	0.68	+0.9
3,515,669	+		IAI47_16580	0.68	-1.4
3,515,669	+		IAI47_16580	0.68	-0.7
3,515,669	+		IAI47_16580	0.68	+0.7
3,515,670	-		IAI47_16580	0.68	-1.5
3,515,670	-		IAI47_16580	0.68	-2.9
3,515,670	-		IAI47_16580	0.68	-0.1
3,515,670	-		IAI47_16580	0.68	-1.0
3,515,670	-		IAI47_16580	0.68	-0.4
3,515,670	-		IAI47_16580	0.68	-0.3
3,515,680	+		IAI47_16580	0.69	-1.4
3,515,692	+		IAI47_16580	0.70	+0.2
3,515,693	-		IAI47_16580	0.70	+0.6
3,515,696	+		IAI47_16580	0.70	+0.7
3,515,696	+		IAI47_16580	0.70	-0.1
3,515,696	+		IAI47_16580	0.70	-0.1
3,515,696	+		IAI47_16580	0.70	+3.7
3,515,697	-		IAI47_16580	0.70	+0.8
3,515,697	-		IAI47_16580	0.70	+0.2
3,515,697	-		IAI47_16580	0.70	+2.0
3,515,697	-		IAI47_16580	0.70	+2.2
3,515,697	-		IAI47_16580	0.70	-0.3
3,515,749	+		IAI47_16580	0.74	+0.6
3,515,750	-		IAI47_16580	0.74	+1.4
3,515,765	+		IAI47_16580	0.75	-1.7
3,515,770	+		IAI47_16580	0.76	-2.5
3,515,770	+		IAI47_16580	0.76	+0.5
3,515,771	-		IAI47_16580	0.76	+0.8
3,515,771	-		IAI47_16580	0.76	-1.0
3,515,774	+		IAI47_16580	0.76	+1.5
3,515,774	+		IAI47_16580	0.76	-0.1
3,515,774	+		IAI47_16580	0.76	-0.5
3,515,774	+		IAI47_16580	0.76	+0.0
3,515,774	+		IAI47_16580	0.76	-3.2
3,515,774	+		IAI47_16580	0.76	+1.6
3,515,774	+		IAI47_16580	0.76	-0.4
3,515,774	+		IAI47_16580	0.76	+0.4
3,515,775	-		IAI47_16580	0.76	-2.6
3,515,775	-		IAI47_16580	0.76	+0.4
3,515,775	-		IAI47_16580	0.76	-1.9
3,515,775	-		IAI47_16580	0.76	-1.6
3,515,775	-		IAI47_16580	0.76	+1.7
3,515,803	+		IAI47_16580	0.78	+0.6
3,515,803	+		IAI47_16580	0.78	+2.2
3,515,803	+		IAI47_16580	0.78	+1.6
3,515,804	-		IAI47_16580	0.78	+0.4
3,515,804	-		IAI47_16580	0.78	-0.4
3,515,804	-		IAI47_16580	0.78	-0.7
3,515,848	+		IAI47_16580	0.81	+1.6
3,515,872	+		IAI47_16580	0.83	-0.5
3,515,872	+		IAI47_16580	0.83	+0.1
3,515,873	-		IAI47_16580	0.83	-0.3
3,515,873	-		IAI47_16580	0.83	-0.7
3,515,873	-		IAI47_16580	0.83	-1.5
3,515,873	-		IAI47_16580	0.83	+0.6
3,515,873	-		IAI47_16580	0.83	-0.2
3,515,883	+		IAI47_16580	0.84	-1.0
3,515,883	+		IAI47_16580	0.84	-0.8
3,515,906	+		IAI47_16580	0.86	-0.8
3,515,907	-		IAI47_16580	0.86	+0.2
3,515,930	+		IAI47_16580	0.88	-3.3
3,515,931	-		IAI47_16580	0.88	+0.6
3,515,948	-		IAI47_16580	0.89	+2.2
3,516,016	+				+0.1
3,516,016	+				+0.5
3,516,017	-				-1.0
3,516,017	-				-0.1
3,516,017	-				-0.3
3,516,021	-				-1.1
3,516,021	-				-0.0
3,516,058	-				-0.1
3,516,108	+				+1.3
3,516,108	+				-0.9
3,516,108	+				+2.4
3,516,109	-				-1.0
3,516,112	-				+1.7
3,516,125	+				+0.5
3,516,126	-				-0.6
3,516,151	-				-1.7
3,516,198	+				-2.0
3,516,199	-				+1.1
3,516,222	+				-1.7
3,516,268	+				+1.5
3,516,269	-				+0.4
3,516,277	+				-0.4
3,516,278	-				+2.0
3,516,278	-				-2.0
3,516,278	-				+1.8
3,516,278	-				-2.3
3,516,278	-				-1.8
3,516,341	+		IAI47_16585	0.12	-2.1
3,516,341	+		IAI47_16585	0.12	-0.6
3,516,347	+		IAI47_16585	0.13	+0.4
3,516,347	+		IAI47_16585	0.13	-1.6
3,516,348	-		IAI47_16585	0.13	-2.5
3,516,348	-		IAI47_16585	0.13	+1.2
3,516,348	-		IAI47_16585	0.13	-1.0
3,516,372	+		IAI47_16585	0.14	-1.0
3,516,372	+		IAI47_16585	0.14	-2.4
3,516,373	-		IAI47_16585	0.14	+0.1
3,516,373	-		IAI47_16585	0.14	+0.4
3,516,373	-		IAI47_16585	0.14	+3.7
3,516,373	-		IAI47_16585	0.14	+3.1
3,516,423	+		IAI47_16585	0.16	+0.6
3,516,423	+		IAI47_16585	0.16	-1.6
3,516,423	+		IAI47_16585	0.16	-2.4
3,516,424	-		IAI47_16585	0.16	-1.5
3,516,424	-		IAI47_16585	0.16	+0.6
3,516,430	+		IAI47_16585	0.17	+0.4
3,516,431	-		IAI47_16585	0.17	+4.0
3,516,431	-		IAI47_16585	0.17	+0.1
3,516,462	+		IAI47_16585	0.18	-1.8
3,516,462	+		IAI47_16585	0.18	+0.2
3,516,462	+		IAI47_16585	0.18	-0.5
3,516,462	+		IAI47_16585	0.18	-0.1
3,516,462	+		IAI47_16585	0.18	-0.7
3,516,462	+		IAI47_16585	0.18	+1.6
3,516,462	+		IAI47_16585	0.18	-0.6
3,516,463	-		IAI47_16585	0.18	-1.2
3,516,463	-		IAI47_16585	0.18	+0.3
3,516,463	-		IAI47_16585	0.18	+1.2
3,516,463	-		IAI47_16585	0.18	-0.8
3,516,463	-		IAI47_16585	0.18	+2.4
3,516,463	-		IAI47_16585	0.18	+0.4
3,516,476	+		IAI47_16585	0.19	+0.4
3,516,476	+		IAI47_16585	0.19	+1.3
3,516,489	+		IAI47_16585	0.19	+1.0
3,516,490	-		IAI47_16585	0.20	-0.5
3,516,498	+		IAI47_16585	0.20	+0.6
3,516,498	+		IAI47_16585	0.20	+3.2
3,516,498	+		IAI47_16585	0.20	+0.8
3,516,498	+		IAI47_16585	0.20	-0.5
3,516,498	+		IAI47_16585	0.20	+2.8
3,516,498	+		IAI47_16585	0.20	+0.1
3,516,498	+		IAI47_16585	0.20	+1.3
3,516,498	+		IAI47_16585	0.20	+0.7
3,516,499	-		IAI47_16585	0.20	-0.2
3,516,499	-		IAI47_16585	0.20	-0.3
3,516,499	-		IAI47_16585	0.20	+0.5
3,516,499	-		IAI47_16585	0.20	+0.2
3,516,499	-		IAI47_16585	0.20	-0.8
3,516,499	-		IAI47_16585	0.20	-1.5
3,516,499	-		IAI47_16585	0.20	+0.7
3,516,499	-		IAI47_16585	0.20	+2.3
3,516,499	-		IAI47_16585	0.20	+0.5
3,516,508	+		IAI47_16585	0.20	+1.6
3,516,508	+		IAI47_16585	0.20	+1.5
3,516,508	+		IAI47_16585	0.20	-0.2
3,516,509	-		IAI47_16585	0.20	-2.8
3,516,509	-		IAI47_16585	0.20	-1.1
3,516,543	+		IAI47_16585	0.22	+0.2
3,516,544	-		IAI47_16585	0.22	-2.2
3,516,544	-		IAI47_16585	0.22	-0.6
3,516,544	-		IAI47_16585	0.22	-1.9
3,516,544	-		IAI47_16585	0.22	+0.4
3,516,652	+		IAI47_16585	0.27	-0.0
3,516,652	+		IAI47_16585	0.27	+1.2
3,516,653	-		IAI47_16585	0.27	-0.6
3,516,653	-		IAI47_16585	0.27	+1.7
3,516,656	+		IAI47_16585	0.28	-2.6
3,516,684	+		IAI47_16585	0.29	+2.2
3,516,684	+		IAI47_16585	0.29	+0.4
3,516,684	+		IAI47_16585	0.29	-0.8
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