Strain Fitness in Pantoea sp. MT58 around IAI47_11795

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,501,399	+				+0.7
2,501,399	+				-0.4
2,501,399	+				-1.7
2,501,400	-				+0.9
2,501,400	-				-1.7
2,501,400	-				-1.1
2,501,496	-		IAI47_11790	0.10	+0.2
2,501,496	-		IAI47_11790	0.10	-2.5
2,501,607	+		IAI47_11790	0.22	-1.2
2,501,652	+		IAI47_11790	0.27	-1.0
2,501,816	+		IAI47_11790	0.44	+0.7
2,501,862	+		IAI47_11790	0.49	-0.9
2,501,864	+		IAI47_11790	0.49	+0.2
2,501,864	+		IAI47_11790	0.49	-0.8
2,501,864	+		IAI47_11790	0.49	+0.4
2,501,864	+		IAI47_11790	0.49	+0.3
2,501,864	+		IAI47_11790	0.49	+0.9
2,501,864	+		IAI47_11790	0.49	-0.7
2,501,864	+		IAI47_11790	0.49	-1.0
2,501,865	-		IAI47_11790	0.49	+0.3
2,501,865	-		IAI47_11790	0.49	+2.5
2,501,865	-		IAI47_11790	0.49	+0.5
2,501,865	-		IAI47_11790	0.49	+0.3
2,501,865	-		IAI47_11790	0.49	+0.6
2,501,891	+		IAI47_11790	0.52	+0.1
2,501,892	-		IAI47_11790	0.52	+0.4
2,501,892	-		IAI47_11790	0.52	-0.3
2,501,892	-		IAI47_11790	0.52	-1.2
2,501,933	+		IAI47_11790	0.57	+1.4
2,501,933	+		IAI47_11790	0.57	-0.7
2,501,933	+		IAI47_11790	0.57	-2.1
2,501,933	+		IAI47_11790	0.57	-0.3
2,501,933	+		IAI47_11790	0.57	-1.3
2,501,933	+		IAI47_11790	0.57	+0.6
2,501,933	+		IAI47_11790	0.57	-2.0
2,501,933	+		IAI47_11790	0.57	-0.1
2,501,933	+		IAI47_11790	0.57	-0.2
2,501,934	-		IAI47_11790	0.57	+0.3
2,501,934	-		IAI47_11790	0.57	+0.5
2,501,934	-		IAI47_11790	0.57	-0.5
2,501,934	-		IAI47_11790	0.57	+1.0
2,502,008	+		IAI47_11790	0.65	-1.5
2,502,009	-		IAI47_11790	0.65	+1.7
2,502,056	+		IAI47_11790	0.70	+1.5
2,502,056	+		IAI47_11790	0.70	+0.5
2,502,057	-		IAI47_11790	0.70	-2.0
2,502,057	-		IAI47_11790	0.70	+0.9
2,502,115	-		IAI47_11790	0.76	+0.7
2,502,192	+		IAI47_11790	0.84	+0.4
2,502,192	+		IAI47_11790	0.84	+1.5
2,502,192	+		IAI47_11790	0.84	+2.6
2,502,193	-		IAI47_11790	0.84	+2.3
2,502,193	-		IAI47_11790	0.84	-1.2
2,502,193	-		IAI47_11790	0.84	-0.8
2,502,216	+		IAI47_11790	0.87	+0.4
2,502,216	+		IAI47_11790	0.87	+0.8
2,502,219	+		IAI47_11790	0.87	-1.0
2,502,219	+		IAI47_11790	0.87	-1.1
2,502,220	-		IAI47_11790	0.87	-1.2
2,502,220	-		IAI47_11790	0.87	+1.4
2,502,220	-		IAI47_11790	0.87	+1.2
2,502,220	-		IAI47_11790	0.87	-2.0
2,502,220	-		IAI47_11790	0.87	+1.2
2,502,220	-		IAI47_11790	0.87	-1.6
2,502,336	+				+0.1
2,502,336	+				-2.2
2,502,337	-				-2.2
2,502,337	-				+0.7
2,502,337	-				-1.0
2,502,689	-		IAI47_11795	0.43	+4.2
2,502,689	-		IAI47_11795	0.43	-0.9
2,502,689	-		IAI47_11795	0.43	+3.8
2,502,689	-		IAI47_11795	0.43	+4.4
2,502,808	+		IAI47_11795	0.57	-1.0
2,502,812	+		IAI47_11795	0.57	-1.5
2,502,876	+		IAI47_11795	0.65	+0.2
2,502,876	+		IAI47_11795	0.65	-0.8
2,502,877	-				+1.2
2,502,903	+		IAI47_11795	0.68	+0.6
2,502,927	+		IAI47_11795	0.71	-0.1
2,502,927	+		IAI47_11795	0.71	-0.8
2,502,928	-		IAI47_11795	0.71	+2.3
2,502,928	-		IAI47_11795	0.71	+0.9
2,502,931	-		IAI47_11795	0.72	+2.3
2,502,963	+		IAI47_11795	0.76	+0.9
2,502,963	+		IAI47_11795	0.76	+0.4
2,502,963	+		IAI47_11795	0.76	-0.0
2,502,963	+		IAI47_11795	0.76	-0.6
2,502,963	+		IAI47_11795	0.76	-1.5
2,502,963	+		IAI47_11795	0.76	+0.0
2,502,963	+		IAI47_11795	0.76	-1.1
2,502,963	+		IAI47_11795	0.76	+0.7
2,502,963	+		IAI47_11795	0.76	+0.6
2,502,963	+		IAI47_11795	0.76	-0.1
2,502,963	+		IAI47_11795	0.76	+0.3
2,502,963	+		IAI47_11795	0.76	-1.3
2,502,963	+		IAI47_11795	0.76	+1.9
2,502,964	-		IAI47_11795	0.76	+4.0
2,502,964	-		IAI47_11795	0.76	+3.1
2,502,964	-		IAI47_11795	0.76	+3.1
2,502,964	-		IAI47_11795	0.76	+3.0
2,502,964	-		IAI47_11795	0.76	+3.5
2,502,964	-		IAI47_11795	0.76	+2.5
2,502,964	-		IAI47_11795	0.76	+3.0
2,502,964	-		IAI47_11795	0.76	+3.7
2,502,964	-		IAI47_11795	0.76	+2.5
2,503,020	+		IAI47_11795	0.82	-1.0
2,503,020	+		IAI47_11795	0.82	+1.2
2,503,021	-		IAI47_11795	0.83	+3.1
2,503,165	+				-0.4
2,503,165	+				+0.4
2,503,165	+				+0.1
2,503,166	-				-2.0
2,503,166	-				-2.2
2,503,166	-				+2.2
2,503,166	-				+0.3
2,503,166	-				+1.8
2,503,166	-				+3.2
2,503,166	-				+1.2
2,503,166	-				+0.9
2,503,170	+				+0.1
2,503,171	-				-0.6
2,503,171	-				-0.5
2,503,199	-				-1.2
2,503,200	+				+0.5
2,503,203	-				+1.3
2,503,232	-				-1.4
2,503,232	-				+0.3
2,503,249	-				+0.7
2,503,254	+				+0.9
2,503,254	+				+3.7
2,503,254	+				+2.4
2,503,254	+				+0.5
2,503,255	-				-0.6
2,503,255	-				-0.1
2,503,255	-				+1.4
2,503,255	-				+0.8
2,503,255	-				-1.6
2,503,255	-				+2.1
2,503,307	+				-2.2
2,503,307	+				-0.8
2,503,308	-				+0.7
2,503,308	-				+2.2
2,503,308	-				+0.6
2,503,308	-				+1.6
2,503,308	-				+1.4
2,503,308	-				+0.9
2,503,321	+				-0.5
2,503,322	-				-1.2
2,503,348	+				-1.1
2,503,386	+				-1.4
2,503,387	-				+0.2
2,503,387	-				+0.2
2,503,718	+		IAI47_11800	0.33	-0.5
2,503,718	+		IAI47_11800	0.33	+4.1
2,503,719	-		IAI47_11800	0.33	-0.2
2,503,719	-		IAI47_11800	0.33	-0.0
2,503,719	-		IAI47_11800	0.33	-2.0
2,503,719	-		IAI47_11800	0.33	-1.8
2,503,719	-		IAI47_11800	0.33	+0.9
2,503,721	-		IAI47_11800	0.33	+1.3
2,503,721	-		IAI47_11800	0.33	-2.0
2,503,721	-		IAI47_11800	0.33	+0.8
2,503,721	-		IAI47_11800	0.33	-1.0
2,503,826	+		IAI47_11800	0.42	+1.5
2,503,827	-		IAI47_11800	0.43	+0.9
2,503,828	+		IAI47_11800	0.43	-1.1
2,503,828	+		IAI47_11800	0.43	+1.9
2,503,828	+		IAI47_11800	0.43	-0.9
2,503,828	+		IAI47_11800	0.43	-2.2
2,503,828	+		IAI47_11800	0.43	+0.2
2,503,829	-		IAI47_11800	0.43	-1.1
2,503,829	-		IAI47_11800	0.43	+0.1
2,503,829	-		IAI47_11800	0.43	+0.4
2,503,829	-		IAI47_11800	0.43	+0.1
2,503,829	-		IAI47_11800	0.43	+1.1
2,503,829	-		IAI47_11800	0.43	-0.0
2,503,870	+		IAI47_11800	0.46	+0.4
2,503,870	+		IAI47_11800	0.46	-1.6
2,503,870	+		IAI47_11800	0.46	-1.3
2,503,870	+		IAI47_11800	0.46	-2.4
2,503,871	-		IAI47_11800	0.47	-0.3
2,503,871	-		IAI47_11800	0.47	-1.4
2,503,871	-		IAI47_11800	0.47	-3.4
2,503,917	-		IAI47_11800	0.51	+1.1
2,503,920	-		IAI47_11800	0.51	+0.1
2,503,934	+		IAI47_11800	0.52	+1.6
2,503,934	+		IAI47_11800	0.52	-0.2
2,503,996	+		IAI47_11800	0.58	-2.3
2,503,996	+		IAI47_11800	0.58	-0.5
2,503,996	+		IAI47_11800	0.58	+1.7
2,503,996	+		IAI47_11800	0.58	-1.3
2,503,996	+		IAI47_11800	0.58	-0.9
2,503,996	+		IAI47_11800	0.58	-0.6
2,503,996	+		IAI47_11800	0.58	-3.4
2,503,996	+		IAI47_11800	0.58	+0.4
2,503,997	-		IAI47_11800	0.58	-1.0
2,503,997	-		IAI47_11800	0.58	-0.0
2,503,997	-		IAI47_11800	0.58	+3.5
2,503,997	-		IAI47_11800	0.58	-1.6
2,503,997	-		IAI47_11800	0.58	-0.5
2,503,997	-		IAI47_11800	0.58	+1.1
2,503,997	-		IAI47_11800	0.58	-0.2
2,503,997	-		IAI47_11800	0.58	-0.9
2,503,997	-		IAI47_11800	0.58	+0.2
2,503,997	-		IAI47_11800	0.58	+1.5
2,504,035	+		IAI47_11800	0.61	-1.5
2,504,036	-		IAI47_11800	0.61	-1.4
2,504,036	-		IAI47_11800	0.61	+0.1
2,504,036	-		IAI47_11800	0.61	-0.6
2,504,070	-		IAI47_11800	0.64	-1.5