Strain Fitness in Pantoea sp. MT58 around IAI47_07855

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,662,431	+				+0.8
1,662,449	+				+1.7
1,662,450	-				+0.1
1,662,497	+				+1.7
1,662,497	+				-0.1
1,662,550	-				-1.1
1,662,550	-				+0.5
1,662,571	+				-1.9
1,662,572	-				-0.3
1,662,610	+				+0.6
1,662,610	+				+0.5
1,662,611	-				+4.3
1,662,687	+		IAI47_07850	0.14	-0.1
1,662,804	+		IAI47_07850	0.30	-1.9
1,662,804	+		IAI47_07850	0.30	+0.8
1,662,804	+		IAI47_07850	0.30	+1.2
1,662,982	+		IAI47_07850	0.54	+1.0
1,662,982	+		IAI47_07850	0.54	-1.5
1,662,982	+		IAI47_07850	0.54	-0.7
1,662,983	-		IAI47_07850	0.54	+0.0
1,662,983	-		IAI47_07850	0.54	+0.3
1,662,983	-		IAI47_07850	0.54	+1.3
1,662,983	-		IAI47_07850	0.54	-0.1
1,663,034	+		IAI47_07850	0.61	+1.0
1,663,034	+		IAI47_07850	0.61	+1.7
1,663,035	-		IAI47_07850	0.61	+0.4
1,663,035	-		IAI47_07850	0.61	+0.8
1,663,035	-		IAI47_07850	0.61	+1.6
1,663,035	-		IAI47_07850	0.61	-0.5
1,663,035	-		IAI47_07850	0.61	+1.1
1,663,036	+		IAI47_07850	0.61	-0.9
1,663,036	+		IAI47_07850	0.61	+1.9
1,663,036	+		IAI47_07850	0.61	-1.9
1,663,037	-		IAI47_07850	0.61	+1.4
1,663,037	-		IAI47_07850	0.61	+0.3
1,663,037	-		IAI47_07850	0.61	-1.3
1,663,037	-		IAI47_07850	0.61	+1.7
1,663,037	-		IAI47_07850	0.61	-0.3
1,663,060	+		IAI47_07850	0.65	+0.6
1,663,061	-		IAI47_07850	0.65	+1.3
1,663,061	-		IAI47_07850	0.65	-0.8
1,663,110	+		IAI47_07850	0.71	+0.3
1,663,110	+		IAI47_07850	0.71	+1.4
1,663,111	-		IAI47_07850	0.72	+2.5
1,663,121	+		IAI47_07850	0.73	+0.4
1,663,122	-		IAI47_07850	0.73	+1.8
1,663,122	-		IAI47_07850	0.73	+1.1
1,663,216	+		IAI47_07850	0.86	-0.9
1,663,216	+		IAI47_07850	0.86	-0.2
1,663,217	-		IAI47_07850	0.86	-1.9
1,663,217	-		IAI47_07850	0.86	+0.2
1,663,295	+				+1.7
1,663,307	+				+0.2
1,663,307	+				-2.3
1,663,307	+				-1.0
1,663,308	-				-1.9
1,663,308	-				+0.7
1,663,417	-				+0.2
1,663,417	-				+0.1
1,663,417	-				+1.8
1,663,417	-				-0.2
1,663,462	+		IAI47_07855	0.14	+1.9
1,663,463	-		IAI47_07855	0.15	+1.3
1,663,508	-		IAI47_07855	0.21	+1.2
1,663,508	-		IAI47_07855	0.21	+3.5
1,663,517	+		IAI47_07855	0.22	-0.3
1,663,517	+		IAI47_07855	0.22	-1.9
1,663,518	-		IAI47_07855	0.22	+1.0
1,663,518	-		IAI47_07855	0.22	+0.3
1,663,518	-		IAI47_07855	0.22	+1.2
1,663,518	-		IAI47_07855	0.22	-1.9
1,663,518	-		IAI47_07855	0.22	-2.4
1,663,518	-		IAI47_07855	0.22	-2.1
1,663,518	-		IAI47_07855	0.22	+2.4
1,663,518	-		IAI47_07855	0.22	+3.5
1,663,518	-		IAI47_07855	0.22	+0.8
1,663,569	-		IAI47_07855	0.29	+0.8
1,663,569	-		IAI47_07855	0.29	-0.9
1,663,569	-		IAI47_07855	0.29	+1.3
1,663,608	+		IAI47_07855	0.34	+2.0
1,663,608	+		IAI47_07855	0.34	-2.4
1,663,609	-		IAI47_07855	0.34	+0.2
1,663,609	-		IAI47_07855	0.34	-2.0
1,663,609	-		IAI47_07855	0.34	+1.3
1,663,648	+		IAI47_07855	0.39	-1.1
1,663,648	+		IAI47_07855	0.39	-1.2
1,663,649	-		IAI47_07855	0.40	-1.5
1,663,649	-		IAI47_07855	0.40	+0.8
1,663,649	-		IAI47_07855	0.40	+2.6
1,663,766	+		IAI47_07855	0.55	-1.2
1,663,767	-		IAI47_07855	0.55	+0.1
1,663,780	+		IAI47_07855	0.57	+3.3
1,663,780	+		IAI47_07855	0.57	-0.9
1,663,781	-		IAI47_07855	0.57	+0.5
1,663,795	+		IAI47_07855	0.59	+1.0
1,663,795	+		IAI47_07855	0.59	+0.1
1,663,795	+		IAI47_07855	0.59	+1.9
1,663,795	+		IAI47_07855	0.59	-0.2
1,663,796	-		IAI47_07855	0.59	-1.2
1,663,796	-		IAI47_07855	0.59	-0.1
1,663,796	-		IAI47_07855	0.59	-0.5
1,663,797	+		IAI47_07855	0.59	+0.1
1,663,797	+		IAI47_07855	0.59	+0.4
1,663,797	+		IAI47_07855	0.59	+1.2
1,663,797	+		IAI47_07855	0.59	+1.9
1,663,797	+		IAI47_07855	0.59	-0.4
1,663,797	+		IAI47_07855	0.59	+1.6
1,663,797	+		IAI47_07855	0.59	+2.9
1,663,797	+		IAI47_07855	0.59	-1.1
1,663,797	+		IAI47_07855	0.59	+3.7
1,663,797	+		IAI47_07855	0.59	-0.4
1,663,798	-		IAI47_07855	0.60	+1.1
1,663,798	-		IAI47_07855	0.60	+0.9
1,663,798	-		IAI47_07855	0.60	+0.3
1,663,798	-		IAI47_07855	0.60	-0.9
1,663,798	-		IAI47_07855	0.60	+1.7
1,663,798	-		IAI47_07855	0.60	-0.7
1,663,798	-		IAI47_07855	0.60	-1.1
1,663,798	-		IAI47_07855	0.60	+0.7
1,663,798	-		IAI47_07855	0.60	-0.1
1,663,798	-		IAI47_07855	0.60	-0.7
1,663,798	-		IAI47_07855	0.60	-1.0
1,663,798	-		IAI47_07855	0.60	+1.8
1,663,798	-		IAI47_07855	0.60	+2.1
1,663,861	+		IAI47_07855	0.68	+1.9
1,663,862	-		IAI47_07855	0.68	+1.9
1,663,862	-		IAI47_07855	0.68	+0.0
1,663,862	-		IAI47_07855	0.68	-0.7
1,663,862	-		IAI47_07855	0.68	+1.7
1,663,862	-		IAI47_07855	0.68	-0.1
1,663,862	-		IAI47_07855	0.68	+2.0
1,663,936	+		IAI47_07855	0.78	+1.5
1,663,936	+		IAI47_07855	0.78	-1.1
1,663,937	-		IAI47_07855	0.78	+3.3
1,663,937	-		IAI47_07855	0.78	+0.1
1,663,937	-		IAI47_07855	0.78	-0.1
1,664,010	+		IAI47_07855	0.88	-0.0
1,664,010	+		IAI47_07855	0.88	-0.7
1,664,010	+		IAI47_07855	0.88	+0.9
1,664,010	+		IAI47_07855	0.88	-0.4
1,664,010	+		IAI47_07855	0.88	+1.3
1,664,010	+		IAI47_07855	0.88	+1.9
1,664,011	-		IAI47_07855	0.88	+1.7
1,664,011	-		IAI47_07855	0.88	+1.2
1,664,011	-		IAI47_07855	0.88	+0.3
1,664,018	+		IAI47_07855	0.89	+0.7
1,664,018	+		IAI47_07855	0.89	-0.6
1,664,019	-		IAI47_07855	0.89	-1.4
1,664,019	-		IAI47_07855	0.89	-0.1
1,664,019	-		IAI47_07855	0.89	+0.7
1,664,019	-		IAI47_07855	0.89	+0.7
1,664,033	+				+0.1
1,664,034	-				-2.5
1,664,115	+				+0.2
1,664,126	+				+0.2
1,664,139	+				+1.0
1,664,139	+				-2.4
1,664,139	+				-1.3
1,664,139	+				-1.6
1,664,139	+				+1.0
1,664,140	-				+1.1
1,664,140	-				+0.9
1,664,140	-				-0.0
1,664,140	-				-2.4
1,664,140	-				+1.1
1,664,321	+				+1.0
1,664,321	+				+0.2
1,664,321	+				+0.7
1,664,321	+				+1.2
1,664,427	+				+2.9
1,664,427	+				-1.5
1,664,427	+				+0.3
1,664,427	+				-0.6
1,664,427	+				+0.7
1,664,428	-				+1.6
1,664,428	-				-1.5
1,664,428	-				-1.1
1,664,428	-				-0.0
1,664,528	+				+0.3
1,664,529	-				-0.5
1,664,537	+				-2.0
1,664,538	-				-1.4
1,664,538	-				+2.1
1,664,556	+				-1.3
1,664,556	+				-2.0
1,664,556	+				-1.1
1,664,557	-				+0.6
1,664,557	-				+2.0
1,664,614	+				-0.7
1,664,614	+				-2.6
1,664,614	+				+1.9
1,664,614	+				-0.7
1,664,614	+				+1.1
1,664,614	+				+1.9
1,664,614	+				-1.4
1,664,614	+				-0.8
1,664,614	+				+0.2
1,664,615	-				+1.8
1,664,615	-				-2.4
1,664,615	-				-1.5
1,664,615	-				-1.5
1,664,615	-				-0.5
1,664,616	+				+2.7
1,664,616	+				-1.4
1,664,616	+				-0.8
1,664,616	+				-1.2
1,664,616	+				-0.5
1,664,616	+				-1.8
1,664,616	+				-1.5
1,664,617	-				+0.8
1,664,617	-				-0.5
1,664,617	-				-0.1
1,664,617	-				+0.6
1,664,617	-				+0.3
1,664,673	-		IAI47_07860	0.11	-0.8
1,664,734	+		IAI47_07860	0.16	-0.6
1,664,735	-		IAI47_07860	0.16	-2.1
1,664,735	-		IAI47_07860	0.16	-0.8
1,664,735	-		IAI47_07860	0.16	-0.7
1,664,782	+		IAI47_07860	0.20	-1.2
1,664,782	+		IAI47_07860	0.20	+0.7
1,664,782	+		IAI47_07860	0.20	+2.0
1,664,782	+		IAI47_07860	0.20	-0.9
1,664,782	+		IAI47_07860	0.20	-0.8
1,664,783	-		IAI47_07860	0.20	-0.8
1,664,783	-		IAI47_07860	0.20	-0.7
1,664,783	-		IAI47_07860	0.20	-1.9
1,664,783	-		IAI47_07860	0.20	-1.2
1,664,783	-		IAI47_07860	0.20	+0.7
1,664,783	-		IAI47_07860	0.20	+0.9
1,664,783	-		IAI47_07860	0.20	+1.3
1,664,784	+		IAI47_07860	0.20	+1.0
1,664,785	-		IAI47_07860	0.20	-0.0
1,664,799	+		IAI47_07860	0.21	+1.3
1,664,800	-		IAI47_07860	0.21	+1.7
1,664,800	-		IAI47_07860	0.21	-2.6
1,664,806	+		IAI47_07860	0.22	-1.0
1,664,806	+		IAI47_07860	0.22	-1.7
1,664,806	+		IAI47_07860	0.22	+1.3
1,664,807	-		IAI47_07860	0.22	+1.3
1,664,807	-		IAI47_07860	0.22	-2.0
1,664,807	-		IAI47_07860	0.22	-2.1
1,664,807	-		IAI47_07860	0.22	-1.7
1,664,875	-		IAI47_07860	0.27	-0.1
1,664,892	+		IAI47_07860	0.28	+0.2
1,664,893	-		IAI47_07860	0.28	-1.2
1,664,958	+		IAI47_07860	0.33	+1.6
1,664,958	+		IAI47_07860	0.33	+0.1
1,664,959	-		IAI47_07860	0.34	+0.7
1,664,959	-		IAI47_07860	0.34	-1.1
1,664,959	-		IAI47_07860	0.34	-0.6
1,664,959	-		IAI47_07860	0.34	-1.4
1,664,991	+		IAI47_07860	0.36	+1.3
1,665,013	-		IAI47_07860	0.38	+0.8