Strain Fitness in Pantoea sp. MT58 around IAI47_17655

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,745,794	+		IAI47_17650	0.33	+1.3
3,745,794	+		IAI47_17650	0.33	-1.1
3,745,794	+		IAI47_17650	0.33	-0.7
3,745,794	+		IAI47_17650	0.33	+0.3
3,745,794	+		IAI47_17650	0.33	-2.4
3,745,794	+		IAI47_17650	0.33	-1.1
3,745,794	+		IAI47_17650	0.33	+1.4
3,745,794	+		IAI47_17650	0.33	+2.1
3,745,794	+		IAI47_17650	0.33	+1.3
3,745,795	-		IAI47_17650	0.33	+2.3
3,745,795	-		IAI47_17650	0.33	-0.9
3,745,795	-		IAI47_17650	0.33	+0.1
3,745,795	-		IAI47_17650	0.33	+2.8
3,745,795	-		IAI47_17650	0.33	+1.5
3,745,795	-		IAI47_17650	0.33	-0.2
3,746,053	+		IAI47_17650	0.51	+0.9
3,746,053	+		IAI47_17650	0.51	-0.8
3,746,053	+		IAI47_17650	0.51	+0.2
3,746,053	+		IAI47_17650	0.51	-2.2
3,746,053	+		IAI47_17650	0.51	+1.1
3,746,054	-		IAI47_17650	0.51	+0.3
3,746,054	-		IAI47_17650	0.51	+2.0
3,746,054	-		IAI47_17650	0.51	-0.8
3,746,155	+		IAI47_17650	0.59	-2.1
3,746,155	+		IAI47_17650	0.59	-0.6
3,746,155	+		IAI47_17650	0.59	-0.7
3,746,155	+		IAI47_17650	0.59	+1.4
3,746,155	+		IAI47_17650	0.59	+0.3
3,746,155	+		IAI47_17650	0.59	+0.6
3,746,155	+		IAI47_17650	0.59	-0.4
3,746,155	+		IAI47_17650	0.59	-0.8
3,746,155	+		IAI47_17650	0.59	-0.3
3,746,156	-		IAI47_17650	0.59	-0.3
3,746,156	-		IAI47_17650	0.59	-0.5
3,746,156	-		IAI47_17650	0.59	+1.3
3,746,156	-		IAI47_17650	0.59	+0.3
3,746,156	-		IAI47_17650	0.59	+0.5
3,746,156	-		IAI47_17650	0.59	-1.0
3,746,156	-		IAI47_17650	0.59	-0.7
3,746,237	+		IAI47_17650	0.64	+2.7
3,746,238	-		IAI47_17650	0.64	-0.1
3,746,295	+		IAI47_17650	0.69	+0.1
3,746,295	+		IAI47_17650	0.69	-0.7
3,746,295	+		IAI47_17650	0.69	-0.4
3,746,295	+		IAI47_17650	0.69	+0.5
3,746,295	+		IAI47_17650	0.69	+0.3
3,746,295	+		IAI47_17650	0.69	+1.0
3,746,296	-		IAI47_17650	0.69	-0.3
3,746,296	-		IAI47_17650	0.69	+1.0
3,746,296	-		IAI47_17650	0.69	+1.3
3,746,296	-		IAI47_17650	0.69	+2.4
3,746,369	+		IAI47_17650	0.74	+1.5
3,746,369	+		IAI47_17650	0.74	+1.0
3,746,370	-		IAI47_17650	0.74	-1.4
3,746,370	-		IAI47_17650	0.74	+0.4
3,746,370	-		IAI47_17650	0.74	-1.3
3,746,443	+		IAI47_17650	0.79	-1.7
3,746,443	+		IAI47_17650	0.79	-1.7
3,746,443	+		IAI47_17650	0.79	+1.2
3,746,443	+		IAI47_17650	0.79	-0.6
3,746,444	-		IAI47_17650	0.79	-0.4
3,746,444	-		IAI47_17650	0.79	+0.3
3,746,512	-		IAI47_17650	0.84	-0.9
3,746,565	+		IAI47_17650	0.88	+0.4
3,746,565	+		IAI47_17650	0.88	+2.2
3,746,565	+		IAI47_17650	0.88	+1.0
3,746,565	+		IAI47_17650	0.88	-1.1
3,746,565	+		IAI47_17650	0.88	-0.5
3,746,566	-		IAI47_17650	0.88	-0.9
3,746,585	+		IAI47_17650	0.89	+1.3
3,746,585	+		IAI47_17650	0.89	+0.8
3,746,585	+		IAI47_17650	0.89	-0.9
3,746,586	-		IAI47_17650	0.89	+0.6
3,746,586	-		IAI47_17650	0.89	-1.9
3,746,587	-		IAI47_17650	0.89	+0.8
3,746,601	-				+0.7
3,746,617	+				+0.5
3,746,617	+				+0.7
3,746,617	+				+0.5
3,746,618	-				-1.6
3,746,625	+				-1.8
3,746,626	-				+1.1
3,746,626	-				-1.5
3,746,626	-				+0.1
3,746,644	+				-0.9
3,746,644	+				-1.2
3,746,645	-				-0.7
3,746,645	-				+1.4
3,746,645	-				+0.9
3,746,645	-				-0.8
3,746,645	-				-0.2
3,746,645	-				-1.2
3,746,655	-				+0.8
3,746,697	+				-1.3
3,746,698	-				-0.9
3,746,698	-				-0.8
3,746,732	+				-0.3
3,746,732	+				-2.0
3,746,732	+				-0.4
3,746,733	-				+1.5
3,746,733	-				+1.2
3,746,733	-				-1.3
3,746,775	+				+0.3
3,746,775	+				+0.7
3,746,776	-				+0.4
3,746,785	+				+0.4
3,746,785	+				+0.7
3,746,786	-				+1.8
3,746,786	-				+0.4
3,746,786	-				-0.8
3,746,789	+				+0.3
3,746,789	+				+1.3
3,746,789	+				+0.5
3,746,790	-				-1.0
3,746,790	-				+0.6
3,746,790	-				-0.1
3,746,790	-				+0.1
3,746,790	-				+1.6
3,746,790	-				+1.0
3,746,790	-				+0.4
3,746,790	-				+1.2
3,746,799	+				+0.8
3,746,799	+				+0.3
3,746,799	+				+0.1
3,746,807	+				+0.4
3,746,840	+				-0.2
3,746,840	+				-0.8
3,746,841	-				+1.0
3,746,841	-				+0.4
3,746,841	-				+2.6
3,746,963	+		IAI47_17655	0.14	-0.4
3,746,963	+		IAI47_17655	0.14	+3.2
3,746,963	+		IAI47_17655	0.14	+1.6
3,746,963	+		IAI47_17655	0.14	+0.4
3,746,963	+		IAI47_17655	0.14	+2.1
3,746,964	-		IAI47_17655	0.14	+2.1
3,746,964	-		IAI47_17655	0.14	-0.3
3,746,964	-		IAI47_17655	0.14	-0.5
3,746,964	-		IAI47_17655	0.14	+0.7
3,746,964	-		IAI47_17655	0.14	+1.3
3,746,964	-		IAI47_17655	0.14	+2.1
3,746,964	-		IAI47_17655	0.14	+0.8
3,746,964	-		IAI47_17655	0.14	-0.6
3,746,964	-		IAI47_17655	0.14	+1.8
3,746,964	-		IAI47_17655	0.14	-0.9
3,746,966	+		IAI47_17655	0.14	-0.3
3,746,966	+		IAI47_17655	0.14	+0.7
3,746,966	+		IAI47_17655	0.14	+1.1
3,746,966	+		IAI47_17655	0.14	-1.0
3,746,966	+		IAI47_17655	0.14	+0.2
3,746,966	+		IAI47_17655	0.14	-0.4
3,746,966	+		IAI47_17655	0.14	+0.3
3,746,966	+		IAI47_17655	0.14	-1.3
3,746,967	-		IAI47_17655	0.14	-1.3
3,746,967	-		IAI47_17655	0.14	+0.7
3,746,967	-		IAI47_17655	0.14	+0.9
3,746,967	-		IAI47_17655	0.14	-0.1
3,746,967	-		IAI47_17655	0.14	+1.9
3,746,967	-		IAI47_17655	0.14	+1.0
3,746,967	-		IAI47_17655	0.14	+1.1
3,746,967	-		IAI47_17655	0.14	-1.4
3,746,967	-		IAI47_17655	0.14	-0.0
3,746,967	-		IAI47_17655	0.14	+0.5
3,746,967	-		IAI47_17655	0.14	+1.2
3,747,020	+		IAI47_17655	0.18	+0.7
3,747,020	+		IAI47_17655	0.18	-1.6
3,747,021	-		IAI47_17655	0.18	+2.8
3,747,063	-		IAI47_17655	0.21	+0.7
3,747,079	+		IAI47_17655	0.23	+0.9
3,747,079	+		IAI47_17655	0.23	+3.2
3,747,080	-		IAI47_17655	0.23	-0.4
3,747,080	-		IAI47_17655	0.23	+1.4
3,747,089	+		IAI47_17655	0.23	+1.4
3,747,089	+		IAI47_17655	0.23	-0.2
3,747,089	+		IAI47_17655	0.23	+1.9
3,747,089	+		IAI47_17655	0.23	+0.7
3,747,089	+		IAI47_17655	0.23	+1.3
3,747,090	-		IAI47_17655	0.23	-0.2
3,747,090	-		IAI47_17655	0.23	+0.6
3,747,090	-		IAI47_17655	0.23	-0.5
3,747,090	-		IAI47_17655	0.23	-0.3
3,747,090	-		IAI47_17655	0.23	+1.0
3,747,091	+		IAI47_17655	0.23	+1.1
3,747,091	+		IAI47_17655	0.23	+0.2
3,747,111	-		IAI47_17655	0.25	+1.3
3,747,111	-		IAI47_17655	0.25	+1.2
3,747,136	+		IAI47_17655	0.27	+0.3
3,747,136	+		IAI47_17655	0.27	+1.3
3,747,136	+		IAI47_17655	0.27	+0.4
3,747,136	+		IAI47_17655	0.27	-0.3
3,747,136	+		IAI47_17655	0.27	+0.1
3,747,136	+		IAI47_17655	0.27	+1.2
3,747,137	-		IAI47_17655	0.27	-0.1
3,747,137	-		IAI47_17655	0.27	+0.3
3,747,137	-		IAI47_17655	0.27	+0.4
3,747,137	-		IAI47_17655	0.27	+1.8
3,747,137	-		IAI47_17655	0.27	-0.4
3,747,137	-		IAI47_17655	0.27	+1.5
3,747,247	+		IAI47_17655	0.35	+0.8
3,747,247	+		IAI47_17655	0.35	-2.1
3,747,248	-		IAI47_17655	0.35	+0.9
3,747,266	+		IAI47_17655	0.37	+1.4
3,747,349	+		IAI47_17655	0.43	+0.8
3,747,440	+		IAI47_17655	0.50	+2.2
3,747,440	+		IAI47_17655	0.50	+1.2
3,747,440	+		IAI47_17655	0.50	+0.6
3,747,440	+		IAI47_17655	0.50	+1.5
3,747,441	-		IAI47_17655	0.50	+1.0
3,747,441	-		IAI47_17655	0.50	+0.2
3,747,441	-		IAI47_17655	0.50	+0.6
3,747,463	+		IAI47_17655	0.52	-0.4
3,747,463	+		IAI47_17655	0.52	+2.6
3,747,463	+		IAI47_17655	0.52	+1.1
3,747,464	-		IAI47_17655	0.52	+0.0
3,747,464	-		IAI47_17655	0.52	+1.0
3,747,482	+		IAI47_17655	0.53	+0.6
3,747,482	+		IAI47_17655	0.53	-0.5
3,747,483	-		IAI47_17655	0.53	+1.4
3,747,483	-		IAI47_17655	0.53	+1.1
3,747,512	+		IAI47_17655	0.56	+0.4
3,747,512	+		IAI47_17655	0.56	-0.5
3,747,512	+		IAI47_17655	0.56	-0.4
3,747,512	+		IAI47_17655	0.56	+1.5
3,747,513	-		IAI47_17655	0.56	-0.7
3,747,513	-		IAI47_17655	0.56	+0.0
3,747,521	+		IAI47_17655	0.56	-0.6
3,747,521	+		IAI47_17655	0.56	+1.6
3,747,521	+		IAI47_17655	0.56	+0.7
3,747,521	+		IAI47_17655	0.56	+1.8
3,747,522	-		IAI47_17655	0.56	+1.2
3,747,522	-		IAI47_17655	0.56	+1.4
3,747,522	-		IAI47_17655	0.56	-0.6
3,747,522	-		IAI47_17655	0.56	+0.9
3,747,727	+		IAI47_17655	0.72	-1.0
3,747,727	+		IAI47_17655	0.72	+0.4
3,747,727	+		IAI47_17655	0.72	+2.0
3,747,769	+		IAI47_17655	0.75	+0.1
3,747,769	+		IAI47_17655	0.75	+0.8
3,747,769	+		IAI47_17655	0.75	+2.1
3,747,770	-		IAI47_17655	0.75	+0.7
3,747,770	-		IAI47_17655	0.75	+0.7
3,747,770	-		IAI47_17655	0.75	+0.8
3,747,770	-		IAI47_17655	0.75	+0.8
3,747,770	-		IAI47_17655	0.75	-2.1
3,747,779	-		IAI47_17655	0.76	+0.4
3,747,779	-		IAI47_17655	0.76	-1.0
3,747,800	+		IAI47_17655	0.77	+2.1
3,747,801	-		IAI47_17655	0.78	+1.6
3,747,850	+		IAI47_17655	0.81	+2.6
3,747,851	-		IAI47_17655	0.81	+3.8
3,747,851	-		IAI47_17655	0.81	+0.7
3,747,856	+		IAI47_17655	0.82	+0.1
3,747,856	+		IAI47_17655	0.82	+0.1
3,747,856	+		IAI47_17655	0.82	+0.5
3,747,856	+		IAI47_17655	0.82	+1.7
3,747,857	-		IAI47_17655	0.82	+0.2
3,747,857	-		IAI47_17655	0.82	+0.5
3,747,857	-		IAI47_17655	0.82	+1.3
3,747,857	-		IAI47_17655	0.82	+1.4
3,747,857	-		IAI47_17655	0.82	-0.3
3,747,857	-		IAI47_17655	0.82	+1.2
3,747,887	+		IAI47_17655	0.84	+0.2
3,747,887	+		IAI47_17655	0.84	-2.2
3,747,887	+		IAI47_17655	0.84	+0.8
3,747,887	+		IAI47_17655	0.84	+2.7
3,747,888	-		IAI47_17655	0.84	+2.4
3,747,888	-		IAI47_17655	0.84	+0.2
3,747,888	-		IAI47_17655	0.84	+2.3
3,747,901	+		IAI47_17655	0.85	+1.2
3,747,901	+		IAI47_17655	0.85	+2.3
3,747,901	+		IAI47_17655	0.85	-0.7
3,747,901	+		IAI47_17655	0.85	+0.4
3,747,901	+		IAI47_17655	0.85	-1.4
3,747,901	+		IAI47_17655	0.85	+1.4
3,747,901	+		IAI47_17655	0.85	+1.9
3,747,902	-		IAI47_17655	0.85	+0.6
3,747,902	-		IAI47_17655	0.85	-0.4
3,747,902	-		IAI47_17655	0.85	+0.8
3,747,902	-		IAI47_17655	0.85	+2.1
3,747,902	-		IAI47_17655	0.85	-0.1
3,747,909	-		IAI47_17655	0.86	-0.5
3,747,909	-		IAI47_17655	0.86	-0.1
3,747,909	-		IAI47_17655	0.86	-0.7
3,747,909	-		IAI47_17655	0.86	+1.2
3,748,000	+				+0.0
3,748,000	+				-1.5
3,748,000	+				-0.2
3,748,000	+				+0.3
3,748,000	+				+2.0
3,748,000	+				-0.5
3,748,000	+				+1.5
3,748,001	-				-0.9
3,748,001	-				-0.2
3,748,001	-				-2.1
3,748,001	-				+1.3
3,748,101	-				+1.2
3,748,106	+				-0.0
3,748,106	+				-0.8
3,748,106	+				+2.1
3,748,106	+				+0.3
3,748,106	+				+1.1
3,748,106	+				+0.8
3,748,106	+				-1.0
3,748,106	+				+1.2
3,748,107	-				+0.1
3,748,107	-				+0.2
3,748,139	+				-1.4
3,748,139	+				+1.3
3,748,152	+				+1.5
3,748,153	-				-2.8
3,748,153	-				+0.1
3,748,153	-				-1.4
3,748,170	-				+1.2
3,748,170	-				+0.4
3,748,202	+				+0.8
3,748,202	+				+0.6
3,748,203	-				+0.0
3,748,203	-				+1.6
3,748,271	+				+2.4
3,748,272	-				-0.5
3,748,278	+				-0.5
3,748,326	+		IAI47_17660	0.12	+0.8
3,748,327	-		IAI47_17660	0.12	+0.6
3,748,327	-		IAI47_17660	0.12	+1.4
3,748,340	+		IAI47_17660	0.13	+0.4
3,748,340	+		IAI47_17660	0.13	+0.4
3,748,341	-		IAI47_17660	0.13	+0.7
3,748,341	-		IAI47_17660	0.13	-1.9
3,748,341	-		IAI47_17660	0.13	-1.0
3,748,341	-		IAI47_17660	0.13	-0.8
3,748,416	+		IAI47_17660	0.17	+1.8
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