Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS08720

Experiment: McCas_formate_complete 3-nitroxypropanol 0.00208333333333333 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete 3-nitroxypropanol 0.00208333333333333 mM
1,604,196	-				-0.4
1,604,196	-				+1.3
1,604,197	+				-0.2
1,604,197	+				-0.9
1,604,198	-				+6.6
1,604,199	+				-1.6
1,604,199	+				-0.2
1,604,199	+				-2.8
1,604,216	+				-2.1
1,604,246	+				-3.6
1,604,247	-				+4.7
1,604,251	-				-1.7
1,604,251	-				-1.2
1,604,251	-				+3.6
1,604,251	-				-0.4
1,604,251	-				-3.4
1,604,252	+				-3.1
1,604,252	+				+3.1
1,604,254	-				+1.6
1,604,254	-				+2.9
1,604,255	+				-2.7
1,604,259	-				-0.4
1,604,363	-		MMJJ_RS08715	0.10	+2.0
1,604,372	-		MMJJ_RS08715	0.11	-1.8
1,604,373	+		MMJJ_RS08715	0.11	-1.2
1,604,433	+		MMJJ_RS08715	0.18	-3.3
1,604,532	-		MMJJ_RS08715	0.29	-2.3
1,604,595	-		MMJJ_RS08715	0.37	+1.0
1,604,597	-		MMJJ_RS08715	0.37	-1.8
1,604,598	+		MMJJ_RS08715	0.37	-2.7
1,604,598	+		MMJJ_RS08715	0.37	+3.8
1,604,636	+		MMJJ_RS08715	0.41	+2.9
1,604,710	-		MMJJ_RS08715	0.50	-1.4
1,604,710	-		MMJJ_RS08715	0.50	-1.4
1,604,712	-		MMJJ_RS08715	0.50	-4.0
1,604,722	-		MMJJ_RS08715	0.51	+1.8
1,604,725	+		MMJJ_RS08715	0.51	-1.2
1,604,752	+		MMJJ_RS08715	0.54	-2.1
1,604,757	+		MMJJ_RS08715	0.55	+2.1
1,604,951	-		MMJJ_RS08715	0.77	-3.9
1,604,952	+		MMJJ_RS08715	0.77	+3.7
1,604,952	+		MMJJ_RS08715	0.77	-3.0
1,604,955	-		MMJJ_RS08715	0.78	+0.9
1,604,955	-		MMJJ_RS08715	0.78	-1.2
1,604,957	-		MMJJ_RS08715	0.78	-1.8
1,604,957	-		MMJJ_RS08715	0.78	-0.2
1,604,957	-		MMJJ_RS08715	0.78	+1.8
1,604,958	+		MMJJ_RS08715	0.78	-2.2
1,604,958	+		MMJJ_RS08715	0.78	-2.9
1,605,034	+		MMJJ_RS08715	0.87	-2.9
1,605,038	+		MMJJ_RS08715	0.87	-3.1
1,605,064	-				-2.2
1,605,071	-				-3.6
1,605,071	-				-0.6
1,605,072	+				+0.0
1,605,073	-				-2.3
1,605,073	-				+2.3
1,605,073	-				-0.1
1,605,073	-				-0.9
1,605,073	-				+4.2
1,605,073	-				-1.2
1,605,073	-				+2.0
1,605,073	-				-3.9
1,605,074	+				-1.3
1,605,074	+				+2.8
1,605,074	+				-2.0
1,605,074	+				-0.2
1,605,074	+				+2.4
1,605,074	+				+0.7
1,605,074	+				+0.7
1,605,074	+				-0.9
1,605,074	+				-3.1
1,605,074	+				+3.3
1,605,074	+				+2.7
1,605,074	+				+0.5
1,605,074	+				-2.7
1,605,074	+				+2.3
1,605,075	-				-2.8
1,605,075	-				-1.9
1,605,075	-				+2.5
1,605,076	+				-2.9
1,605,076	+				-2.2
1,605,101	-				+1.8
1,605,148	-				-3.5
1,605,153	-				-3.7
1,605,153	-				-0.6
1,605,154	+				-0.9
1,605,154	+				-2.5
1,605,193	-				+0.4
1,605,193	-				+5.0
1,605,203	-				-0.2
1,605,250	+				+4.5
1,605,282	+				-3.2
1,605,285	-				+5.0
1,605,304	-		MMJJ_RS08720	0.10	-2.6
1,605,304	-		MMJJ_RS08720	0.10	-2.5
1,605,304	-		MMJJ_RS08720	0.10	-0.9
1,605,304	-		MMJJ_RS08720	0.10	+3.9
1,605,305	+		MMJJ_RS08720	0.11	-2.4
1,605,305	+		MMJJ_RS08720	0.11	-0.9
1,605,305	+		MMJJ_RS08720	0.11	-3.7
1,605,381	-		MMJJ_RS08720	0.16	+5.5
1,605,382	+		MMJJ_RS08720	0.16	+7.4
1,605,512	-		MMJJ_RS08720	0.26	-1.6
1,605,512	-		MMJJ_RS08720	0.26	-1.6
1,605,513	+		MMJJ_RS08720	0.26	-1.2
1,605,582	-		MMJJ_RS08720	0.31	-0.9
1,605,582	-		MMJJ_RS08720	0.31	-0.7
1,605,647	-		MMJJ_RS08720	0.36	-1.2
1,605,647	-		MMJJ_RS08720	0.36	-1.4
1,605,701	-		MMJJ_RS08720	0.40	+0.2
1,605,702	+		MMJJ_RS08720	0.41	-2.9
1,605,702	+		MMJJ_RS08720	0.41	+0.4
1,605,702	+		MMJJ_RS08720	0.41	-1.8
1,605,748	-		MMJJ_RS08720	0.44	-2.6
1,605,748	-		MMJJ_RS08720	0.44	+2.4
1,605,749	+		MMJJ_RS08720	0.44	-1.6
1,605,768	+		MMJJ_RS08720	0.46	-3.3
1,605,772	-		MMJJ_RS08720	0.46	-0.2
1,605,773	+		MMJJ_RS08720	0.46	+1.4
1,605,813	+		MMJJ_RS08720	0.49	+2.4
1,605,854	-		MMJJ_RS08720	0.52	-0.2
1,605,855	+		MMJJ_RS08720	0.52	+0.4
1,605,863	-		MMJJ_RS08720	0.53	-2.8
1,605,863	-		MMJJ_RS08720	0.53	+1.4
1,605,868	-		MMJJ_RS08720	0.53	-2.3
1,605,869	+		MMJJ_RS08720	0.53	-1.8
1,605,953	-		MMJJ_RS08720	0.59	-0.3
1,605,979	-		MMJJ_RS08720	0.61	-0.6
1,605,981	-		MMJJ_RS08720	0.62	+2.2
1,605,982	+		MMJJ_RS08720	0.62	-1.4
1,605,982	+		MMJJ_RS08720	0.62	+4.1
1,605,982	+		MMJJ_RS08720	0.62	+4.9
1,605,982	+		MMJJ_RS08720	0.62	-1.4
1,606,002	-		MMJJ_RS08720	0.63	+0.3
1,606,017	-		MMJJ_RS08720	0.64	+4.3
1,606,018	+		MMJJ_RS08720	0.64	+1.0
1,606,023	+		MMJJ_RS08720	0.65	+3.0
1,606,037	-		MMJJ_RS08720	0.66	+4.4
1,606,038	+		MMJJ_RS08720	0.66	-2.1
1,606,066	-		MMJJ_RS08720	0.68	-0.5
1,606,067	+		MMJJ_RS08720	0.68	+5.8
1,606,070	+		MMJJ_RS08720	0.68	-1.6
1,606,079	-		MMJJ_RS08720	0.69	+4.2
1,606,079	-		MMJJ_RS08720	0.69	-2.4
1,606,080	+		MMJJ_RS08720	0.69	-2.5
1,606,086	-		MMJJ_RS08720	0.70	+3.4
1,606,170	+		MMJJ_RS08720	0.76	-2.1
1,606,173	+		MMJJ_RS08720	0.76	-0.9
1,606,173	+		MMJJ_RS08720	0.76	-1.6
1,606,175	-		MMJJ_RS08720	0.76	-1.2
1,606,175	-		MMJJ_RS08720	0.76	+0.9
1,606,176	+		MMJJ_RS08720	0.76	-1.2
1,606,176	+		MMJJ_RS08720	0.76	-0.9
1,606,176	+		MMJJ_RS08720	0.76	+4.3
1,606,176	+		MMJJ_RS08720	0.76	-0.9
1,606,191	-		MMJJ_RS08720	0.77	-1.6
1,606,191	-		MMJJ_RS08720	0.77	-3.4
1,606,194	-		MMJJ_RS08720	0.78	-0.8
1,606,202	+		MMJJ_RS08720	0.78	-0.6
1,606,207	-		MMJJ_RS08720	0.79	-1.8
1,606,207	-		MMJJ_RS08720	0.79	+0.4
1,606,208	+		MMJJ_RS08720	0.79	-0.9
1,606,208	+		MMJJ_RS08720	0.79	-0.6
1,606,208	+		MMJJ_RS08720	0.79	-2.8
1,606,209	-		MMJJ_RS08720	0.79	-2.4
1,606,236	-		MMJJ_RS08720	0.81	+1.3
1,606,236	-		MMJJ_RS08720	0.81	-2.6
1,606,236	-		MMJJ_RS08720	0.81	+0.4
1,606,237	+		MMJJ_RS08720	0.81	-0.6
1,606,237	+		MMJJ_RS08720	0.81	-2.4
1,606,237	+		MMJJ_RS08720	0.81	-1.2
1,606,237	+		MMJJ_RS08720	0.81	+2.7
1,606,239	-		MMJJ_RS08720	0.81	-1.2
1,606,239	-		MMJJ_RS08720	0.81	+0.8
1,606,239	-		MMJJ_RS08720	0.81	-1.4
1,606,240	+		MMJJ_RS08720	0.81	-0.9
1,606,240	+		MMJJ_RS08720	0.81	-3.2
1,606,240	+		MMJJ_RS08720	0.81	-2.3
1,606,241	-		MMJJ_RS08720	0.81	-2.1
1,606,241	-		MMJJ_RS08720	0.81	-2.1
1,606,241	-		MMJJ_RS08720	0.81	+3.1
1,606,241	-		MMJJ_RS08720	0.81	+3.6
1,606,241	-		MMJJ_RS08720	0.81	-1.9
1,606,242	+		MMJJ_RS08720	0.81	-0.9
1,606,242	+		MMJJ_RS08720	0.81	-1.2
1,606,242	+		MMJJ_RS08720	0.81	-2.4
1,606,243	-		MMJJ_RS08720	0.81	-2.7
1,606,243	-		MMJJ_RS08720	0.81	-1.2
1,606,243	-		MMJJ_RS08720	0.81	+0.4
1,606,244	+		MMJJ_RS08720	0.81	-0.2
1,606,301	-		MMJJ_RS08720	0.86	+4.1
1,606,301	-		MMJJ_RS08720	0.86	-0.7
1,606,302	+		MMJJ_RS08720	0.86	-2.2
1,606,303	-		MMJJ_RS08720	0.86	+4.8
1,606,303	-		MMJJ_RS08720	0.86	-1.4
1,606,335	-		MMJJ_RS08720	0.88	+3.0
1,606,354	+		MMJJ_RS08720	0.90	-1.8
1,606,363	-				-2.4
1,606,363	-				-1.9
1,606,387	+				+4.9
1,606,425	-				-1.8
1,606,427	-				-0.6
1,606,428	+				+1.5
1,606,428	+				+0.1
1,606,501	-				+3.4
1,606,501	-				-1.4
1,606,501	-				-2.4
1,606,501	-				+6.7
1,606,502	+				-1.2
1,606,504	+				-0.2
1,606,504	+				-1.6
1,606,505	-				-1.2
1,606,505	-				-2.6
1,606,505	-				+0.1
1,606,506	+				-1.8
1,606,506	+				-2.5
1,606,516	+				+3.9
1,606,542	+				-3.8
1,606,554	-				-2.2
1,606,656	-				+5.2
1,606,656	-				-0.2
1,606,657	+				-1.8
1,606,657	+				+2.6
1,606,666	-				-3.2
1,606,775	-				+0.4
1,606,775	-				-0.6
1,606,776	+				+7.0
1,606,866	-		MMJJ_RS08725	0.14	-2.2
1,606,877	+		MMJJ_RS08725	0.14	-0.2
1,606,881	+		MMJJ_RS08725	0.15	+4.5
1,606,881	+		MMJJ_RS08725	0.15	-0.6
1,606,896	+		MMJJ_RS08725	0.16	-2.1
1,606,919	-		MMJJ_RS08725	0.17	-0.2
1,606,920	+		MMJJ_RS08725	0.17	+1.4
1,606,920	+		MMJJ_RS08725	0.17	-0.2
1,606,942	+		MMJJ_RS08725	0.19	+1.4
1,606,952	-		MMJJ_RS08725	0.19	-0.2
1,606,953	+		MMJJ_RS08725	0.19	+0.4
1,607,000	+		MMJJ_RS08725	0.22	-1.4
1,607,000	+		MMJJ_RS08725	0.22	-0.9
1,607,000	+		MMJJ_RS08725	0.22	+5.4
1,607,000	+		MMJJ_RS08725	0.22	+1.4
1,607,003	+		MMJJ_RS08725	0.23	+1.8
1,607,003	+		MMJJ_RS08725	0.23	-2.1
1,607,003	+				-0.2
1,607,061	-		MMJJ_RS08725	0.26	-1.1
1,607,062	+		MMJJ_RS08725	0.27	-2.2
1,607,091	-		MMJJ_RS08725	0.28	+3.8
1,607,091	-		MMJJ_RS08725	0.28	-1.2
1,607,092	+		MMJJ_RS08725	0.29	+0.4
1,607,092	+		MMJJ_RS08725	0.29	-0.9
1,607,113	+		MMJJ_RS08725	0.30	+6.1
1,607,115	-		MMJJ_RS08725	0.30	-0.2
1,607,115	-		MMJJ_RS08725	0.30	-1.4
1,607,115	-		MMJJ_RS08725	0.30	-1.2
1,607,115	-		MMJJ_RS08725	0.30	-1.6
1,607,116	+		MMJJ_RS08725	0.30	-0.6
1,607,116	+		MMJJ_RS08725	0.30	+1.4
1,607,116	+		MMJJ_RS08725	0.30	+1.4
1,607,116	+		MMJJ_RS08725	0.30	+3.0
1,607,116	+		MMJJ_RS08725	0.30	+5.9
1,607,116	+				+1.4
1,607,116	+		MMJJ_RS08725	0.30	-1.8
1,607,117	-		MMJJ_RS08725	0.30	+3.6
1,607,117	-		MMJJ_RS08725	0.30	-2.4
1,607,118	+		MMJJ_RS08725	0.30	-1.8
1,607,152	+		MMJJ_RS08725	0.32	+6.8
1,607,152	+		MMJJ_RS08725	0.32	-0.2
1,607,164	+		MMJJ_RS08725	0.33	-1.4
1,607,181	+		MMJJ_RS08725	0.34	+5.8
1,607,186	-		MMJJ_RS08725	0.35	+1.4
1,607,186	-		MMJJ_RS08725	0.35	-1.8
1,607,201	-		MMJJ_RS08725	0.36	+1.4
1,607,202	+		MMJJ_RS08725	0.36	+0.4
1,607,202	+		MMJJ_RS08725	0.36	-0.6
1,607,221	+		MMJJ_RS08725	0.37	+0.4
1,607,278	-				+0.4
1,607,279	+		MMJJ_RS08725	0.41	-1.4
1,607,279	+		MMJJ_RS08725	0.41	-0.2
1,607,279	+		MMJJ_RS08725	0.41	+3.1
1,607,280	-		MMJJ_RS08725	0.41	-0.2
1,607,280	-		MMJJ_RS08725	0.41	-0.6
1,607,280	-		MMJJ_RS08725	0.41	-0.2
1,607,280	-		MMJJ_RS08725	0.41	+1.4
1,607,280	-		MMJJ_RS08725	0.41	+0.4
1,607,280	-		MMJJ_RS08725	0.41	+4.7
1,607,280	-		MMJJ_RS08725	0.41	+0.4
1,607,280	-		MMJJ_RS08725	0.41	-1.8
1,607,280	-		MMJJ_RS08725	0.41	-1.2
1,607,280	-		MMJJ_RS08725	0.41	-2.6
1,607,280	-				+1.4
1,607,280	-		MMJJ_RS08725	0.41	+5.2
1,607,280	-		MMJJ_RS08725	0.41	+1.4
1,607,280	-		MMJJ_RS08725	0.41	-0.2
1,607,281	+		MMJJ_RS08725	0.41	+5.0
1,607,281	+		MMJJ_RS08725	0.41	-0.2
1,607,281	+		MMJJ_RS08725	0.41	+7.7
1,607,281	+		MMJJ_RS08725	0.41	+2.7
1,607,281	+		MMJJ_RS08725	0.41	-1.9
1,607,284	-		MMJJ_RS08725	0.41	-0.6
1,607,284	-		MMJJ_RS08725	0.41	-0.6
1,607,284	-		MMJJ_RS08725	0.41	-1.8
1,607,284	-		MMJJ_RS08725	0.41	-1.4
1,607,285	+				-0.2
1,607,286	-		MMJJ_RS08725	0.41	-0.2
1,607,361	+		MMJJ_RS08725	0.46	+4.9
1,607,361	+		MMJJ_RS08725	0.46	-0.6
1,607,361	+		MMJJ_RS08725	0.46	-2.6
1,607,364	-		MMJJ_RS08725	0.46	-0.9
1,607,364	-		MMJJ_RS08725	0.46	+0.0
1,607,365	+		MMJJ_RS08725	0.47	-2.6
1,607,365	+		MMJJ_RS08725	0.47	+1.4
1,607,382	-		MMJJ_RS08725	0.48	-0.6
1,607,382	-		MMJJ_RS08725	0.48	-0.2
1,607,383	+		MMJJ_RS08725	0.48	-2.3
1,607,406	+		MMJJ_RS08725	0.49	-1.2
1,607,429	-		MMJJ_RS08725	0.51	+5.2
1,607,454	+		MMJJ_RS08725	0.52	-1.2
1,607,471	+		MMJJ_RS08725	0.54	+1.2
1,607,472	-		MMJJ_RS08725	0.54	-0.2
1,607,473	+				+1.4