Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS08040

Experiment: McCas_formate_complete 3-nitroxypropanol 0.00208333333333333 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete 3-nitroxypropanol 0.00208333333333333 mM
1,470,539	-		MMJJ_RS08030	0.64	-1.1
1,470,540	+		MMJJ_RS08030	0.64	+2.0
1,470,545	-		MMJJ_RS08030	0.65	-0.1
1,470,570	-		MMJJ_RS08030	0.69	+2.7
1,470,571	+		MMJJ_RS08030	0.69	-0.6
1,470,581	+		MMJJ_RS08030	0.71	-1.4
1,470,608	-		MMJJ_RS08030	0.75	-1.0
1,470,609	+		MMJJ_RS08030	0.75	-1.4
1,470,614	-		MMJJ_RS08030	0.76	-3.4
1,470,615	+		MMJJ_RS08030	0.76	-0.6
1,470,618	-		MMJJ_RS08030	0.76	-1.4
1,470,618	-		MMJJ_RS08030	0.76	+1.1
1,470,619	+		MMJJ_RS08030	0.77	+2.2
1,470,625	+		MMJJ_RS08030	0.77	+0.9
1,470,630	+		MMJJ_RS08030	0.78	-0.3
1,470,630	+		MMJJ_RS08030	0.78	+2.9
1,470,635	-		MMJJ_RS08030	0.79	+0.8
1,470,643	-		MMJJ_RS08030	0.80	+1.2
1,470,643	-		MMJJ_RS08030	0.80	+0.5
1,470,644	+		MMJJ_RS08030	0.80	+2.3
1,470,648	+		MMJJ_RS08030	0.81	+1.6
1,470,665	-		MMJJ_RS08030	0.84	-1.1
1,470,723	-				-0.6
1,470,726	-				+1.3
1,470,726	-				-3.6
1,470,726	-				-2.6
1,470,727	+				-1.4
1,470,732	-				-1.4
1,470,750	-				+0.0
1,470,775	+				+2.8
1,470,791	+				-1.9
1,470,791	+				-1.4
1,470,791	+				-0.3
1,470,792	-				-2.0
1,470,793	+				+0.3
1,470,809	-				+0.4
1,471,027	-		MMJJ_RS08035	0.37	-3.3
1,471,027	-		MMJJ_RS08035	0.37	-1.9
1,471,028	+		MMJJ_RS08035	0.37	-1.2
1,471,042	+		MMJJ_RS08035	0.39	-0.6
1,471,043	-		MMJJ_RS08035	0.39	-0.8
1,471,146	-		MMJJ_RS08035	0.55	+0.1
1,471,146	-				+1.4
1,471,146	-		MMJJ_RS08035	0.55	-1.2
1,471,146	-		MMJJ_RS08035	0.55	+0.2
1,471,154	+		MMJJ_RS08035	0.56	-0.4
1,471,242	+		MMJJ_RS08035	0.69	-0.1
1,471,262	+		MMJJ_RS08035	0.72	-0.8
1,471,365	-		MMJJ_RS08035	0.88	+0.9
1,471,370	-		MMJJ_RS08035	0.89	-3.9
1,471,370	-		MMJJ_RS08035	0.89	-1.4
1,471,371	+		MMJJ_RS08035	0.89	+1.4
1,471,371	+		MMJJ_RS08035	0.89	-0.9
1,471,401	-				+0.1
1,471,403	-				+0.4
1,471,403	-				-0.2
1,471,404	+				-2.2
1,471,413	-				-1.0
1,471,454	-				+1.0
1,471,455	+				+0.7
1,471,455	+				-1.9
1,471,455	+				+2.0
1,471,460	-				-2.5
1,471,461	+				+2.9
1,471,472	-				-0.9
1,471,473	+				+1.4
1,471,473	+				-3.2
1,471,473	+				-0.9
1,471,476	+				+1.4
1,471,476	+				-3.0
1,471,477	-				+1.4
1,471,477	-				+3.4
1,471,477	-				-1.6
1,471,478	+				+2.3
1,471,478	+				-2.1
1,471,485	+				-0.4
1,471,492	+				+0.7
1,471,492	+				-0.6
1,471,521	-				-0.3
1,471,522	+				+0.9
1,471,540	-				+5.9
1,471,541	+				+1.5
1,471,541	+				-0.5
1,471,541	+				+1.7
1,471,550	-				+1.0
1,471,550	-				-1.6
1,471,578	-				-0.9
1,471,578	-				+3.3
1,471,579	+				+0.6
1,471,593	-				-1.3
1,471,602	-				+0.4
1,471,667	-		MMJJ_RS08040	0.12	+0.1
1,471,668	+		MMJJ_RS08040	0.12	+0.8
1,471,716	-		MMJJ_RS08040	0.16	+1.1
1,471,723	+		MMJJ_RS08040	0.17	+1.2
1,471,735	+		MMJJ_RS08040	0.18	-1.2
1,471,911	-		MMJJ_RS08040	0.33	-0.9
1,471,911	-		MMJJ_RS08040	0.33	+1.5
1,471,911	-		MMJJ_RS08040	0.33	-1.2
1,471,917	-		MMJJ_RS08040	0.34	+0.1
1,471,928	-		MMJJ_RS08040	0.35	+0.1
1,471,956	+		MMJJ_RS08040	0.37	-0.2
1,471,967	-		MMJJ_RS08040	0.38	-1.9
1,471,968	+		MMJJ_RS08040	0.38	-0.5
1,472,017	+		MMJJ_RS08040	0.42	-0.4
1,472,017	+		MMJJ_RS08040	0.42	-0.5
1,472,039	-		MMJJ_RS08040	0.44	-0.2
1,472,096	+		MMJJ_RS08040	0.49	+0.4
1,472,099	-		MMJJ_RS08040	0.50	+4.0
1,472,099	-		MMJJ_RS08040	0.50	-0.0
1,472,099	-		MMJJ_RS08040	0.50	-3.7
1,472,099	-		MMJJ_RS08040	0.50	+3.1
1,472,100	+		MMJJ_RS08040	0.50	-2.2
1,472,100	+		MMJJ_RS08040	0.50	-3.5
1,472,100	+		MMJJ_RS08040	0.50	-0.1
1,472,104	-		MMJJ_RS08040	0.50	+2.9
1,472,104	-		MMJJ_RS08040	0.50	+1.9
1,472,105	+		MMJJ_RS08040	0.50	+2.2
1,472,198	+		MMJJ_RS08040	0.58	+2.6
1,472,211	+		MMJJ_RS08040	0.59	+4.6
1,472,212	-		MMJJ_RS08040	0.59	+4.1
1,472,320	+		MMJJ_RS08040	0.69	+5.0
1,472,324	-		MMJJ_RS08040	0.69	-2.7
1,472,325	+		MMJJ_RS08040	0.69	+0.6
1,472,325	+		MMJJ_RS08040	0.69	-4.2
1,472,363	-		MMJJ_RS08040	0.72	+1.4
1,472,364	+		MMJJ_RS08040	0.72	+1.2
1,472,364	+		MMJJ_RS08040	0.72	+2.9
1,472,381	+		MMJJ_RS08040	0.74	-2.8
1,472,383	-		MMJJ_RS08040	0.74	+0.7
1,472,384	+		MMJJ_RS08040	0.74	+1.8
1,472,415	-		MMJJ_RS08040	0.77	+4.3
1,472,420	-		MMJJ_RS08040	0.77	+1.4
1,472,467	-		MMJJ_RS08040	0.81	-1.3
1,472,515	+		MMJJ_RS08040	0.85	-1.2
1,472,605	+				-1.4
1,472,606	-				-1.9
1,472,700	+				+1.8
1,472,719	+				-2.1
1,472,758	-				+2.8
1,472,765	+				-0.1
1,472,802	-		MMJJ_RS08045	0.14	+0.9
1,472,805	-		MMJJ_RS08045	0.14	+0.4
1,472,850	+		MMJJ_RS08045	0.20	+1.1
1,472,865	-		MMJJ_RS08045	0.22	+0.6
1,472,892	+		MMJJ_RS08045	0.25	-0.9
1,472,892	+		MMJJ_RS08045	0.25	+1.0
1,472,939	-		MMJJ_RS08045	0.32	-1.9
1,472,939	-		MMJJ_RS08045	0.32	-1.7
1,472,940	+		MMJJ_RS08045	0.32	-3.4
1,472,940	+		MMJJ_RS08045	0.32	-1.7
1,472,963	-		MMJJ_RS08045	0.35	-0.9
1,472,964	+		MMJJ_RS08045	0.35	+3.4
1,472,966	-		MMJJ_RS08045	0.35	+1.9
1,472,967	+		MMJJ_RS08045	0.35	-0.9
1,472,967	+		MMJJ_RS08045	0.35	+3.2
1,472,967	+		MMJJ_RS08045	0.35	-1.4
1,472,967	+		MMJJ_RS08045	0.35	+1.1
1,472,968	-		MMJJ_RS08045	0.35	-1.0
1,472,968	-		MMJJ_RS08045	0.35	+0.4
1,472,968	-		MMJJ_RS08045	0.35	+0.2
1,472,969	+		MMJJ_RS08045	0.35	-0.8
1,472,969	+		MMJJ_RS08045	0.35	-0.6
1,472,970	-		MMJJ_RS08045	0.36	-0.6
1,472,970	-		MMJJ_RS08045	0.36	-0.9
1,472,971	+		MMJJ_RS08045	0.36	-1.3
1,472,971	+		MMJJ_RS08045	0.36	+2.3
1,472,971	+		MMJJ_RS08045	0.36	-2.7
1,472,976	-		MMJJ_RS08045	0.36	+0.0
1,472,977	+		MMJJ_RS08045	0.36	+1.0
1,472,977	+		MMJJ_RS08045	0.36	-0.3
1,472,983	-		MMJJ_RS08045	0.37	+1.3
1,472,983	-		MMJJ_RS08045	0.37	+1.3
1,472,984	+		MMJJ_RS08045	0.37	+1.4
1,472,988	-		MMJJ_RS08045	0.38	-0.1
1,472,989	+		MMJJ_RS08045	0.38	-3.1
1,472,989	+		MMJJ_RS08045	0.38	+0.7
1,472,993	+		MMJJ_RS08045	0.39	+1.7
1,472,993	+		MMJJ_RS08045	0.39	+2.4
1,473,064	+		MMJJ_RS08045	0.48	+0.5
1,473,073	-		MMJJ_RS08045	0.49	-0.0
1,473,081	-		MMJJ_RS08045	0.50	-2.6
1,473,082	+		MMJJ_RS08045	0.50	-0.2
1,473,117	+		MMJJ_RS08045	0.55	+0.8
1,473,117	+		MMJJ_RS08045	0.55	-0.0
1,473,120	+		MMJJ_RS08045	0.55	-2.2
1,473,120	+		MMJJ_RS08045	0.55	+1.1
1,473,156	+		MMJJ_RS08045	0.60	+2.4
1,473,161	+		MMJJ_RS08045	0.61	+0.7
1,473,177	-		MMJJ_RS08045	0.63	+1.1
1,473,230	-		MMJJ_RS08045	0.70	-3.7
1,473,230	-		MMJJ_RS08045	0.70	-0.6
1,473,251	+		MMJJ_RS08045	0.72	+1.1
1,473,320	-		MMJJ_RS08045	0.81	-2.0
1,473,321	+		MMJJ_RS08045	0.81	-3.8
1,473,322	-		MMJJ_RS08045	0.82	-0.9
1,473,323	+		MMJJ_RS08045	0.82	+2.3
1,473,323	+		MMJJ_RS08045	0.82	+2.5
1,473,323	+		MMJJ_RS08045	0.82	+1.5
1,473,346	-		MMJJ_RS08045	0.85	-2.9
1,473,358	-		MMJJ_RS08045	0.86	+1.6
1,473,359	+		MMJJ_RS08045	0.86	-0.2
1,473,359	+		MMJJ_RS08045	0.86	+1.7
1,473,363	-		MMJJ_RS08045	0.87	+1.2
1,473,394	+				+1.4
1,473,421	-				-0.2
1,473,421	-				-1.9
1,473,422	+				+0.6
1,473,448	+				+1.4
1,473,478	-				-0.7
1,473,478	-				-0.8
1,473,479	+				-0.2
1,473,485	-				+0.1
1,473,485	-				-4.7
1,473,486	+				+1.9
1,473,491	+				+2.4
1,473,491	+				-0.9
1,473,492	-				-2.5
1,473,499	-				-0.6
1,473,500	+				-0.2
1,473,500	+				+0.7
1,473,509	-				+1.3
1,473,524	+				+0.4
1,473,546	+				+0.8
1,473,562	+				-4.3
1,473,565	-				+1.0
1,473,565	-				-1.4
1,473,566	+				-2.1
1,473,569	-				-2.1
1,473,570	+				-2.1
1,473,570	+				-2.9
1,473,576	+				-0.9
1,473,576	+				+1.3
1,473,585	-				+1.1
1,473,585	-				+1.8
1,473,606	-				-0.1