Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS09155

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
1,697,806	+		MMJJ_RS09150	0.55	+1.2
1,698,555	-				+1.1
1,698,582	+				-0.8
1,698,606	+				+2.4
1,698,609	+				-1.2
1,698,623	+				-0.5
1,698,636	+				-1.9
1,698,636	+				-0.5
1,698,641	+				-1.4
1,698,641	+				-1.9
1,698,647	+				+2.6
1,698,773	+		MMJJ_RS09155	0.12	-0.9
1,698,858	-		MMJJ_RS09155	0.21	+1.5
1,698,859	+		MMJJ_RS09155	0.22	-1.9
1,698,910	-		MMJJ_RS09155	0.27	-2.0
1,698,916	-		MMJJ_RS09155	0.28	-1.1
1,698,916	-		MMJJ_RS09155	0.28	-2.1
1,698,917	+		MMJJ_RS09155	0.28	+0.0
1,698,917	+		MMJJ_RS09155	0.28	-2.1
1,698,917	+		MMJJ_RS09155	0.28	+0.3
1,698,917	+		MMJJ_RS09155	0.28	-0.8
1,698,937	-		MMJJ_RS09155	0.30	-1.6
1,698,963	+		MMJJ_RS09155	0.33	-1.9
1,698,978	+		MMJJ_RS09155	0.35	-1.4
1,699,047	-		MMJJ_RS09155	0.42	-1.1
1,699,055	+		MMJJ_RS09155	0.43	-2.0
1,699,055	+		MMJJ_RS09155	0.43	+3.3
1,699,063	-		MMJJ_RS09155	0.44	-0.8
1,699,063	-		MMJJ_RS09155	0.44	-0.8
1,699,085	-		MMJJ_RS09155	0.47	+2.6
1,699,168	-		MMJJ_RS09155	0.56	+2.9
1,699,169	+		MMJJ_RS09155	0.56	-1.9
1,699,169	+		MMJJ_RS09155	0.56	-0.5
1,699,169	+		MMJJ_RS09155	0.56	-3.7
1,699,169	+		MMJJ_RS09155	0.56	+4.2
1,699,169	+		MMJJ_RS09155	0.56	-1.4
1,699,170	-		MMJJ_RS09155	0.56	-0.9
1,699,170	-		MMJJ_RS09155	0.56	-2.9
1,699,170	-		MMJJ_RS09155	0.56	-0.8
1,699,170	-		MMJJ_RS09155	0.56	-0.1
1,699,170	-		MMJJ_RS09155	0.56	-2.2
1,699,170	-		MMJJ_RS09155	0.56	+2.3
1,699,171	+		MMJJ_RS09155	0.56	-1.6
1,699,171	+		MMJJ_RS09155	0.56	+0.5
1,699,171	+		MMJJ_RS09155	0.56	-0.1
1,699,171	+		MMJJ_RS09155	0.56	-1.1
1,699,171	+		MMJJ_RS09155	0.56	+0.2
1,699,171	+		MMJJ_RS09155	0.56	+3.7
1,699,171	+		MMJJ_RS09155	0.56	-2.6
1,699,172	-		MMJJ_RS09155	0.56	+0.2
1,699,172	-		MMJJ_RS09155	0.56	-1.9
1,699,173	+		MMJJ_RS09155	0.57	-1.1
1,699,173	+		MMJJ_RS09155	0.57	-0.6
1,699,183	-		MMJJ_RS09155	0.58	+0.6
1,699,184	+		MMJJ_RS09155	0.58	-1.5
1,699,184	+		MMJJ_RS09155	0.58	-1.6
1,699,214	-		MMJJ_RS09155	0.61	+2.4
1,699,250	+		MMJJ_RS09155	0.65	-0.5
1,699,262	+		MMJJ_RS09155	0.66	-0.2
1,699,265	-		MMJJ_RS09155	0.67	+1.1
1,699,265	-		MMJJ_RS09155	0.67	-2.0
1,699,265	-		MMJJ_RS09155	0.67	+0.3
1,699,265	-		MMJJ_RS09155	0.67	-0.4
1,699,266	+		MMJJ_RS09155	0.67	-2.1
1,699,266	+		MMJJ_RS09155	0.67	-1.6
1,699,266	+		MMJJ_RS09155	0.67	-0.4
1,699,289	-		MMJJ_RS09155	0.69	+1.5
1,699,289	-		MMJJ_RS09155	0.69	-0.7
1,699,290	+		MMJJ_RS09155	0.70	-1.9
1,699,293	-		MMJJ_RS09155	0.70	+3.0
1,699,294	+		MMJJ_RS09155	0.70	+0.4
1,699,343	+		MMJJ_RS09155	0.75	+0.5
1,699,386	+		MMJJ_RS09155	0.80	+0.2
1,699,395	-		MMJJ_RS09155	0.81	+1.4
1,699,399	-		MMJJ_RS09155	0.82	-2.7
1,699,399	-		MMJJ_RS09155	0.82	+0.6
1,699,923	+		MMJJ_RS09160	0.27	-1.6
1,700,447	-		MMJJ_RS09160	0.69	+0.2
1,700,448	+		MMJJ_RS09160	0.69	-0.1