Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS09120

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
1,688,789	-		MMJJ_RS09120	0.56	+0.2
1,688,959	+		MMJJ_RS09120	0.68	+0.2
1,689,169	-		MMJJ_RS09120	0.83	-1.4
1,689,198	-				+0.2
1,689,421	+				+0.3
1,689,440	-				+0.5
1,689,452	-				+0.4
1,689,701	-		MMJJ_RS09125	0.20	-3.0
1,689,726	+		MMJJ_RS09125	0.22	-0.7
1,689,741	+		MMJJ_RS09125	0.23	-1.8
1,689,782	+		MMJJ_RS09125	0.27	+1.6
1,689,839	+		MMJJ_RS09125	0.31	-1.8
1,689,917	+		MMJJ_RS09125	0.37	+0.4
1,689,929	-		MMJJ_RS09125	0.38	+1.5
1,689,958	+		MMJJ_RS09125	0.41	+0.2
1,689,964	-		MMJJ_RS09125	0.41	+0.4
1,690,048	+		MMJJ_RS09125	0.48	+1.6
1,690,073	+		MMJJ_RS09125	0.50	+2.3
1,690,111	+		MMJJ_RS09125	0.53	+0.8
1,690,120	+		MMJJ_RS09125	0.54	+1.5
1,690,120	+		MMJJ_RS09125	0.54	-1.6
1,690,217	+		MMJJ_RS09125	0.61	+1.3
1,690,223	+		MMJJ_RS09125	0.62	-0.4
1,690,236	-		MMJJ_RS09125	0.63	-0.2
1,690,239	+				+0.2
1,690,380	-		MMJJ_RS09125	0.74	-0.3
1,690,381	+		MMJJ_RS09125	0.75	+1.6
1,690,390	-		MMJJ_RS09125	0.75	-0.5