Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS08990

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
1,657,480	+		MMJJ_RS08990	0.31	-0.4
1,657,524	-		MMJJ_RS08990	0.33	-0.4
1,658,935	+				+1.2
1,659,303	+				-1.9
1,659,329	-				-1.1
1,659,329	-				-2.8
1,659,329	-				-0.4
1,659,334	-				-3.6
1,659,341	-				+0.9
1,659,365	+				-0.8
1,659,378	-				+3.3
1,659,378	-				+0.1
1,659,378	-				-1.3
1,659,378	-				+6.2
1,659,379	+				-0.5
1,659,382	-				+1.4
1,659,382	-				+1.6
1,659,382	-				+0.4
1,659,382	-				-2.0
1,659,382	-				-0.8
1,659,382	-				+0.8
1,659,382	-				-1.6
1,659,382	-				+1.3
1,659,382	-				-2.6
1,659,383	+				-1.6
1,659,383	+				-0.3
1,659,383	+				-0.1
1,659,383	+				-1.8
1,659,383	+				+1.6
1,659,384	-				+1.1
1,659,385	+				-4.0
1,659,394	+				+3.2
1,659,394	+				-1.4
1,659,394	+				-1.0
1,659,394	+				-2.5
1,659,424	-				-1.9
1,659,425	+				+0.1
1,659,522	-				-2.9
1,659,522	-				-1.1
1,659,567	-				+1.4
1,659,568	+				+3.0
1,659,570	-				-1.2
1,659,571	+				+2.4
1,659,571	+				-2.1
1,659,575	+				-1.2
1,659,589	-				-2.8
1,659,589	-				-1.4
1,659,589	-				-2.6
1,659,589	-				-0.8
1,659,589	-				+1.8
1,659,589	-				+1.1
1,659,604	-				+1.9
1,659,604	-				+1.2
1,659,605	+				+2.2
1,659,605	+				-1.5
1,659,605	+				+2.5
1,659,606	-				-0.2
1,659,606	-				-1.6
1,659,606	-				+0.6
1,659,607	+				-1.8
1,659,607	+				+3.1
1,659,608	-				-0.2
1,659,609	+				+1.5
1,659,615	+				+0.3
1,659,654	-				-1.4
1,659,655	+				-2.1
1,659,686	-				-1.1
1,659,687	+				-3.9
1,659,687	+				-0.2
1,659,687	+				-0.2
1,659,687	+				+1.1
1,659,697	-				-0.2
1,659,698	+				+2.4
1,659,698	+				-2.2
1,659,698	+				+3.0
1,659,710	+				-1.3
1,659,710	+				+0.0
1,659,714	-				+3.7
1,659,719	+				-2.4
1,659,723	+				-1.1
1,659,723	+				+4.5
1,659,723	+				-2.4
1,659,725	-				-0.4
1,659,727	-				-2.0
1,659,727	-				-1.1
1,659,728	+				-0.4
1,659,740	-				-2.4
1,659,740	-				-1.6
1,659,752	-				+1.1
1,659,752	-				+1.8
1,659,752	-				+4.1
1,659,753	+				+4.1
1,659,753	+				-2.2
1,659,754	-				-3.3
1,659,754	-				+0.7
1,659,754	-				+2.0
1,659,754	-				+0.4
1,659,754	-				-2.9
1,659,755	+				+0.4
1,659,755	+				+0.7
1,659,755	+				+1.2
1,659,755	+				+1.7
1,659,755	+				-1.5
1,659,764	-				+0.1
1,659,764	-				+3.8
1,659,764	-				+0.3
1,659,764	-				-0.5
1,659,765	+				+5.0
1,659,765	+				+0.8
1,659,765	+				+2.6
1,659,766	-				-0.1
1,659,766	-				-1.5
1,659,766	-				-0.6
1,659,767	+				+3.1
1,659,767	+				-0.6
1,659,767	+				+1.5
1,659,767	+				+4.4
1,659,773	+				-2.1
1,659,804	-		MMJJ_RS09000	0.10	-1.1
1,659,805	+		MMJJ_RS09000	0.10	-1.9
1,659,805	+		MMJJ_RS09000	0.10	+1.7
1,659,808	+		MMJJ_RS09000	0.11	+5.6
1,659,808	+		MMJJ_RS09000	0.11	+1.8
1,659,808	+		MMJJ_RS09000	0.11	-0.8
1,659,808	+		MMJJ_RS09000	0.11	+1.5
1,659,837	+		MMJJ_RS09000	0.14	+0.5
1,659,844	-		MMJJ_RS09000	0.14	-0.9
1,659,844	-		MMJJ_RS09000	0.14	-1.4
1,659,845	+		MMJJ_RS09000	0.14	-1.9
1,659,845	+		MMJJ_RS09000	0.14	-2.2
1,659,845	+		MMJJ_RS09000	0.14	+0.7
1,659,845	+		MMJJ_RS09000	0.14	-0.8
1,659,845	+		MMJJ_RS09000	0.14	-0.1
1,659,845	+		MMJJ_RS09000	0.14	+2.1
1,659,845	+		MMJJ_RS09000	0.14	+0.4
1,659,850	-		MMJJ_RS09000	0.15	+1.0
1,659,851	+		MMJJ_RS09000	0.15	-0.4
1,659,851	+		MMJJ_RS09000	0.15	+0.5
1,659,854	-		MMJJ_RS09000	0.15	-3.5
1,659,855	+		MMJJ_RS09000	0.15	-0.1
1,659,856	-		MMJJ_RS09000	0.15	+1.0
1,659,884	-		MMJJ_RS09000	0.18	-0.5
1,659,884	-		MMJJ_RS09000	0.18	-0.8
1,659,885	+		MMJJ_RS09000	0.18	-1.6
1,659,885	+		MMJJ_RS09000	0.18	+1.0
1,659,885	+		MMJJ_RS09000	0.18	+0.4
1,659,888	-		MMJJ_RS09000	0.18	-1.2
1,659,889	+		MMJJ_RS09000	0.18	-2.5
1,659,890	-		MMJJ_RS09000	0.19	-2.0
1,659,890	-		MMJJ_RS09000	0.19	+3.1
1,659,891	+		MMJJ_RS09000	0.19	-2.3
1,659,895	-		MMJJ_RS09000	0.19	-1.5
1,659,896	+		MMJJ_RS09000	0.19	-0.4