Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS08615

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
1,585,726	+		MMJJ_RS08610	0.31	-0.1
1,586,417	-				-0.4
1,586,417	-				-0.5
1,586,533	+				+1.8
1,586,628	-		MMJJ_RS08615	0.15	+0.2
1,586,629	+		MMJJ_RS08615	0.15	+1.5
1,586,691	-		MMJJ_RS08615	0.20	-1.1
1,586,775	-		MMJJ_RS08615	0.27	+0.2
1,586,805	-		MMJJ_RS08615	0.30	-3.3
1,586,806	+		MMJJ_RS08615	0.30	+1.7
1,586,838	+		MMJJ_RS08615	0.32	+3.0
1,586,871	-		MMJJ_RS08615	0.35	+4.2
1,586,881	+		MMJJ_RS08615	0.36	+2.5
1,586,881	+		MMJJ_RS08615	0.36	-1.1
1,586,905	+		MMJJ_RS08615	0.38	-1.8
1,586,905	+		MMJJ_RS08615	0.38	+2.7
1,586,967	-		MMJJ_RS08615	0.43	-0.7
1,587,020	-		MMJJ_RS08615	0.48	+1.2
1,587,031	+		MMJJ_RS08615	0.49	-2.2
1,587,081	-		MMJJ_RS08615	0.53	-2.5
1,587,082	+		MMJJ_RS08615	0.53	+0.5
1,587,103	-		MMJJ_RS08615	0.55	+0.2
1,587,153	-		MMJJ_RS08615	0.59	-2.4
1,587,154	+		MMJJ_RS08615	0.59	-2.7
1,587,157	-				+0.2
1,587,273	-		MMJJ_RS08615	0.69	+3.0
1,587,274	+		MMJJ_RS08615	0.70	-0.8
1,587,283	-		MMJJ_RS08615	0.70	+0.9
1,587,286	+		MMJJ_RS08615	0.71	+3.0
1,587,323	+		MMJJ_RS08615	0.74	-2.4
1,587,354	-		MMJJ_RS08615	0.76	-1.8
1,587,354	-		MMJJ_RS08615	0.76	+2.2
1,587,373	-		MMJJ_RS08615	0.78	-1.6
1,587,374	+		MMJJ_RS08615	0.78	-1.1
1,587,374	+		MMJJ_RS08615	0.78	+1.7
1,587,374	+		MMJJ_RS08615	0.78	-1.4
1,587,376	-		MMJJ_RS08615	0.78	-2.1
1,587,377	+		MMJJ_RS08615	0.78	-2.2
1,587,380	+		MMJJ_RS08615	0.79	+3.4
1,587,405	+		MMJJ_RS08615	0.81	+4.0
1,587,429	-		MMJJ_RS08615	0.83	+3.9
1,587,445	+		MMJJ_RS08615	0.84	+1.6
1,587,445	+		MMJJ_RS08615	0.84	+0.4
1,587,460	-		MMJJ_RS08615	0.85	+1.7
1,587,465	-		MMJJ_RS08615	0.86	-1.0
1,587,466	+		MMJJ_RS08615	0.86	+0.9
1,587,471	+		MMJJ_RS08615	0.86	-1.4
1,587,514	+				-2.1
1,587,659	+				-2.2
1,587,671	+				+0.2
1,587,886	-		MMJJ_RS08620	0.20	+1.2
1,587,952	-		MMJJ_RS08620	0.26	-0.8
1,588,008	+		MMJJ_RS08620	0.31	-0.4
1,588,326	+		MMJJ_RS08620	0.60	+1.3
1,588,402	-				+0.2
1,588,408	-		MMJJ_RS08620	0.67	-3.0
1,588,445	+		MMJJ_RS08620	0.71	+1.2
1,588,475	-		MMJJ_RS08620	0.73	-0.8
1,588,476	+		MMJJ_RS08620	0.74	-1.8
1,588,528	-		MMJJ_RS08620	0.78	-3.0
1,588,540	-		MMJJ_RS08620	0.79	+0.6