Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS08330

Experiment: McCas_formate_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_formate_complete Antimycin A 0.01 mM
1,534,553	-				+0.2
1,534,756	-		MMJJ_RS08325	0.20	-1.4
1,534,782	-		MMJJ_RS08325	0.24	-0.8
1,534,993	-		MMJJ_RS08325	0.55	+0.6
1,535,200	-		MMJJ_RS08325	0.84	-4.1
1,535,200	-		MMJJ_RS08325	0.84	+1.2
1,535,244	-				+2.0
1,535,268	-				-0.8
1,535,344	-				+2.6
1,535,357	-				-1.4
1,535,357	-				+1.2
1,535,357	-				-0.4
1,535,370	-				-1.5
1,535,370	-				+2.6
1,535,372	-				+1.9
1,535,383	+				-0.2
1,535,386	+				-0.6
1,535,386	+				-1.6
1,535,386	+				+2.9
1,535,386	+				-0.0
1,535,389	-				+0.9
1,535,406	-				+3.0
1,535,426	-				+0.6
1,535,427	+				-1.8
1,535,458	-				+1.5
1,535,599	+		MMJJ_RS08330	0.12	+0.2
1,535,764	+		MMJJ_RS08330	0.25	+0.2
1,535,783	-		MMJJ_RS08330	0.27	-1.1
1,535,872	+		MMJJ_RS08330	0.34	-2.1
1,535,899	+		MMJJ_RS08330	0.36	-1.8
1,536,153	+		MMJJ_RS08330	0.57	+1.2
1,536,156	+		MMJJ_RS08330	0.57	-0.8
1,536,411	+		MMJJ_RS08330	0.78	-0.4
1,536,805	-		MMJJ_RS08335	0.20	+0.2
1,536,806	+		MMJJ_RS08335	0.20	-2.6
1,536,826	-		MMJJ_RS08335	0.23	+0.2
1,536,977	-		MMJJ_RS08335	0.43	-1.6
1,537,427	-				+0.0
1,537,454	-				-1.4
1,537,499	-		MMJJ_RS08340	0.18	-0.8
1,537,517	+		MMJJ_RS08340	0.21	-1.6
1,537,518	-		MMJJ_RS08340	0.21	-0.8
1,537,518	-		MMJJ_RS08340	0.21	+1.2
1,537,520	-		MMJJ_RS08340	0.22	+1.7
1,537,520	-		MMJJ_RS08340	0.22	+0.2
1,537,520	-		MMJJ_RS08340	0.22	-1.4
1,537,521	+		MMJJ_RS08340	0.22	-1.8
1,537,556	-		MMJJ_RS08340	0.28	-1.4
1,537,556	-		MMJJ_RS08340	0.28	-1.4
1,537,591	+		MMJJ_RS08340	0.34	-1.8